RNA–Protein interactions for RNA: ENST00000588860.5

SMAD4-206, Transcript of SMAD family member 4, humanhuman

TSL 4

Gene SMAD4, Length 779 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD4-206ENST00000588860 TAF1DQ9H5J8 278 aaPredicted RBP9.69□□□□□ -0.86
SMAD4-206ENST00000588860 MRPL44Q9H9J2 332 aaKnown RBP9.69□□□□□ -0.86
SMAD4-206ENST00000588860 A1CFQ9NQ94 594 aaKnown RBP9.69□□□□□ -0.86
SMAD4-206ENST00000588860 KCND1Q9NSA2 647 aa9.69□□□□□ -0.86
SMAD4-206ENST00000588860 WRAP73Q9P2S5 460 aaPredicted RBP9.69□□□□□ -0.86
SMAD4-206ENST00000588860 CASP8AP2Q9UKL3 1982 aa9.68□□□□□ -0.86
SMAD4-206ENST00000588860 PFASO15067 1338 aa9.68□□□□□ -0.86
SMAD4-206ENST00000588860 WDR64B1ANS9 1081 aa9.68□□□□□ -0.86
SMAD4-206ENST00000588860 TRAF5O00463 557 aa9.68□□□□□ -0.86
SMAD4-206ENST00000588860 CXCL11O14625 94 aa9.68□□□□□ -0.86
SMAD4-206ENST00000588860 ZBTB39O15060 712 aa9.68□□□□□ -0.86
SMAD4-206ENST00000588860 PEX10O60683 326 aa9.68□□□□□ -0.86
SMAD4-206ENST00000588860 TNNT1P13805 278 aa9.68□□□□□ -0.86
SMAD4-206ENST00000588860 FXR1P51114 621 aaKnown RBP eCLIP9.68□□□□□ -0.86
SMAD4-206ENST00000588860 CASP5P51878 434 aa9.68□□□□□ -0.86
SMAD4-206ENST00000588860 JAK3P52333 1124 aa9.68□□□□□ -0.86
SMAD4-206ENST00000588860 SOX10P56693 466 aa9.68□□□□□ -0.86
SMAD4-206ENST00000588860 KRT76Q01546 638 aa9.68□□□□□ -0.86
SMAD4-206ENST00000588860 PTPN14Q15678 1187 aa9.68□□□□□ -0.86
SMAD4-206ENST00000588860 MAN2A1Q16706 1144 aa9.68□□□□□ -0.86
SMAD4-206ENST00000588860 CCDC40Q4G0X9 1142 aa9.68□□□□□ -0.86
SMAD4-206ENST00000588860 ZCWPW2Q504Y3 356 aa9.68□□□□□ -0.86
SMAD4-206ENST00000588860 MIIPQ5JXC2 388 aa9.68□□□□□ -0.86
SMAD4-206ENST00000588860 E4F1Q66K89 784 aaPredicted RBP9.68□□□□□ -0.86
SMAD4-206ENST00000588860 EPM2AIP1Q7L775 607 aaPredicted RBP9.68□□□□□ -0.86
SMAD4-206ENST00000588860 VSIG10LQ86VR7 867 aa9.68□□□□□ -0.86
SMAD4-206ENST00000588860 MYCT1Q8N699 235 aa9.68□□□□□ -0.86
SMAD4-206ENST00000588860 OPTNQ96CV9 577 aa9.68□□□□□ -0.86
SMAD4-206ENST00000588860 GPRASP2Q96D09 838 aa9.68□□□□□ -0.86
SMAD4-206ENST00000588860 PPP1R13BQ96KQ4 1090 aa9.68□□□□□ -0.86
SMAD4-206ENST00000588860 PCMTD1Q96MG8 357 aaPredicted RBP9.68□□□□□ -0.86
SMAD4-206ENST00000588860 CEP63Q96MT8 703 aa9.68□□□□□ -0.86
SMAD4-206ENST00000588860 CCDC43Q96MW1 224 aaKnown RBP9.68□□□□□ -0.86
SMAD4-206ENST00000588860 PAGR1Q9BTK6 254 aa9.68□□□□□ -0.86
SMAD4-206ENST00000588860 KCTD10Q9H3F6 313 aa9.68□□□□□ -0.86
SMAD4-206ENST00000588860 ZSWIM4Q9H7M6 989 aa9.68□□□□□ -0.86
SMAD4-206ENST00000588860 POLD4Q9HCU8 107 aa9.68□□□□□ -0.86
SMAD4-206ENST00000588860 BTBD7Q9P203 1132 aa9.68□□□□□ -0.86
SMAD4-206ENST00000588860 ABT1Q9ULW3 272 aaKnown RBP9.68□□□□□ -0.86
SMAD4-206ENST00000588860 UBE4BO95155 1302 aa9.67□□□□□ -0.86
SMAD4-206ENST00000588860 CALUO43852 315 aaPredicted RBP9.67□□□□□ -0.86
SMAD4-206ENST00000588860 STX10O60499 249 aa9.67□□□□□ -0.86
SMAD4-206ENST00000588860 ATP9AO75110 1047 aa9.67□□□□□ -0.86
SMAD4-206ENST00000588860 HIP1RO75146 1068 aa9.67□□□□□ -0.86
SMAD4-206ENST00000588860 PRPF6O94906 941 aaKnown RBP9.67□□□□□ -0.86
SMAD4-206ENST00000588860 GCNT3O95395 438 aa9.67□□□□□ -0.86
SMAD4-206ENST00000588860 CCNE2O96020 404 aa9.67□□□□□ -0.86
SMAD4-206ENST00000588860 SFNP31947 248 aa9.67□□□□□ -0.86
SMAD4-206ENST00000588860 QARSP47897 775 aaKnown RBP9.67□□□□□ -0.86
SMAD4-206ENST00000588860 FKBP3Q00688 224 aaKnown RBP9.67□□□□□ -0.86
SMAD4-206ENST00000588860 TBC1D8BQ0IIM8 1120 aa9.67□□□□□ -0.86
SMAD4-206ENST00000588860 SYCP1Q15431 976 aa9.67□□□□□ -0.86
SMAD4-206ENST00000588860 VWA3BQ502W6 1294 aa9.67□□□□□ -0.86
SMAD4-206ENST00000588860 PADI6Q6TGC4 694 aa9.67□□□□□ -0.86
SMAD4-206ENST00000588860 LBX2Q6XYB7 198 aa9.67□□□□□ -0.86
SMAD4-206ENST00000588860 PNMA8AQ86V59 439 aaPredicted RBP9.67□□□□□ -0.86
SMAD4-206ENST00000588860 NCAPG2Q86XI2 1143 aa9.67□□□□□ -0.86
SMAD4-206ENST00000588860 RIOX2Q8IUF8 465 aa9.67□□□□□ -0.86
SMAD4-206ENST00000588860 ANKRD35Q8N283 1001 aa9.67□□□□□ -0.86
SMAD4-206ENST00000588860 FBXO22Q8NEZ5 403 aa9.67□□□□□ -0.86
SMAD4-206ENST00000588860 NAA15Q9BXJ9 866 aaKnown RBP9.67□□□□□ -0.86
SMAD4-206ENST00000588860 MFRPQ9BY79 579 aa9.67□□□□□ -0.86
SMAD4-206ENST00000588860 SPATC1LQ9H0A9 340 aa9.67□□□□□ -0.86
SMAD4-206ENST00000588860 ASCC2Q9H1I8 757 aaPredicted RBP9.67□□□□□ -0.86
SMAD4-206ENST00000588860 PARVGQ9HBI0 331 aa9.67□□□□□ -0.86
SMAD4-206ENST00000588860 ABHD10Q9NUJ1 306 aa9.67□□□□□ -0.86
SMAD4-206ENST00000588860 KCND2Q9NZV8 630 aa9.67□□□□□ -0.86
SMAD4-206ENST00000588860 FBXO40Q9UH90 709 aa9.67□□□□□ -0.86
SMAD4-206ENST00000588860 DBR1Q9UK59 544 aaKnown RBP9.67□□□□□ -0.86
SMAD4-206ENST00000588860 ODF2LQ9ULJ1 636 aa9.67□□□□□ -0.86
SMAD4-206ENST00000588860 AGTPBP1Q9UPW5 1226 aa9.67□□□□□ -0.86
SMAD4-206ENST00000588860 KCNH4Q9UQ05 1017 aa9.67□□□□□ -0.86
SMAD4-206ENST00000588860 SIP14410 1827 aa9.67□□□□□ -0.86
SMAD4-206ENST00000588860 NFASCO94856 1347 aa9.66□□□□□ -0.86
SMAD4-206ENST00000588860 SOWAHDA6NJG2 315 aa9.66□□□□□ -0.86
SMAD4-206ENST00000588860 SFI1A8K8P3 1242 aa9.66□□□□□ -0.86
SMAD4-206ENST00000588860 RNF225M0QZC1 329 aaPredicted RBP9.66□□□□□ -0.86
SMAD4-206ENST00000588860 CETN3O15182 167 aa9.66□□□□□ -0.86
SMAD4-206ENST00000588860 EIF3DO15371 548 aaKnown RBP eCLIP9.66□□□□□ -0.86
SMAD4-206ENST00000588860 ZSCAN12O43309 604 aa9.66□□□□□ -0.86
SMAD4-206ENST00000588860 CNMDO75829 334 aa9.66□□□□□ -0.86
SMAD4-206ENST00000588860 STAM2O75886 525 aa9.66□□□□□ -0.86
SMAD4-206ENST00000588860 GNA14O95837 355 aa9.66□□□□□ -0.86
SMAD4-206ENST00000588860 KCNA2P16389 499 aa9.66□□□□□ -0.86
SMAD4-206ENST00000588860 OSBPP22059 807 aa9.66□□□□□ -0.86
SMAD4-206ENST00000588860 GUCY2CP25092 1073 aa9.66□□□□□ -0.86
SMAD4-206ENST00000588860 NMT1P30419 496 aaKnown RBP9.66□□□□□ -0.86
SMAD4-206ENST00000588860 HOXD13P35453 343 aa9.66□□□□□ -0.86
SMAD4-206ENST00000588860 KRT9P35527 623 aa9.66□□□□□ -0.86
SMAD4-206ENST00000588860 KLK7P49862 253 aa9.66□□□□□ -0.86
SMAD4-206ENST00000588860 PSMC5P62195 406 aa9.66□□□□□ -0.86
SMAD4-206ENST00000588860 HERVK_113P62684 666 aa9.66□□□□□ -0.86
SMAD4-206ENST00000588860 CNTN2Q02246 1040 aa9.66□□□□□ -0.86
SMAD4-206ENST00000588860 UGCGQ16739 394 aa9.66□□□□□ -0.86
SMAD4-206ENST00000588860 KNOP1Q1ED39 458 aaKnown RBP9.66□□□□□ -0.86
SMAD4-206ENST00000588860 BMT2Q1RMZ1 405 aa9.66□□□□□ -0.86
SMAD4-206ENST00000588860 EDRF1Q3B7T1 1238 aa9.66□□□□□ -0.86
SMAD4-206ENST00000588860 GNPTABQ3T906 1256 aa9.66□□□□□ -0.86
SMAD4-206ENST00000588860 ZNF746Q6NUN9 644 aaPredicted RBP9.66□□□□□ -0.86
SMAD4-206ENST00000588860 TOGARAM2Q6ZUX3 1019 aa9.66□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 22 ms