RNA–Protein interactions for RNA: ENST00000588692.5

DDX39A-208, Transcript of DExD-box helicase 39A, humanhuman

TSL 5

Gene DDX39A, Length 1,478 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX39A-208ENST00000588692 TMEM62Q0P6H9 643 aa16.29■□□□□ 0.2
DDX39A-208ENST00000588692 LETM2Q2VYF4 491 aa16.29■□□□□ 0.2
DDX39A-208ENST00000588692 C8orf34Q49A92 452 aa16.29■□□□□ 0.2
DDX39A-208ENST00000588692 B3GNT9Q6UX72 402 aa16.29■□□□□ 0.2
DDX39A-208ENST00000588692 MIER3Q7Z3K6 550 aa16.29■□□□□ 0.2
DDX39A-208ENST00000588692 NSUN7Q8NE18 718 aaKnown RBP16.29■□□□□ 0.2
DDX39A-208ENST00000588692 YME1L1Q96TA2 773 aa16.29■□□□□ 0.2
DDX39A-208ENST00000588692 RALGAPA2Q2PPJ7 1873 aa16.29■□□□□ 0.2
DDX39A-208ENST00000588692 EPOPA6NHQ4 379 aa16.29■□□□□ 0.2
DDX39A-208ENST00000588692 CD52P31358 61 aa16.29■□□□□ 0.2
DDX39A-208ENST00000588692 KRT2P35908 639 aa16.29■□□□□ 0.2
DDX39A-208ENST00000588692 PRKCEQ02156 737 aa16.29■□□□□ 0.2
DDX39A-208ENST00000588692 PAK2Q13177 524 aa16.29■□□□□ 0.2
DDX39A-208ENST00000588692 PIK3AP1Q6ZUJ8 805 aa16.29■□□□□ 0.2
DDX39A-208ENST00000588692 KIAA0319LQ8IZA0 1049 aa16.29■□□□□ 0.2
DDX39A-208ENST00000588692 ZNF710Q8N1W2 664 aa16.29■□□□□ 0.2
DDX39A-208ENST00000588692 FAM20AQ96MK3 541 aa16.29■□□□□ 0.2
DDX39A-208ENST00000588692 SAMD11Q96NU1 681 aa16.29■□□□□ 0.2
DDX39A-208ENST00000588692 AGO3Q9H9G7 860 aaKnown RBP16.29■□□□□ 0.2
DDX39A-208ENST00000588692 NRBP2Q9NSY0 501 aa16.29■□□□□ 0.2
DDX39A-208ENST00000588692 GJB4Q9NTQ9 266 aa16.29■□□□□ 0.2
DDX39A-208ENST00000588692 LIMCH1Q9UPQ0 1083 aa16.29■□□□□ 0.2
DDX39A-208ENST00000588692 TTC3P53804 2025 aa16.28■□□□□ 0.2
DDX39A-208ENST00000588692 NLRC5Q86WI3 1866 aa16.28■□□□□ 0.2
DDX39A-208ENST00000588692 RFXAPO00287 272 aa16.28■□□□□ 0.2
DDX39A-208ENST00000588692 TBX3O15119 743 aa16.28■□□□□ 0.2
DDX39A-208ENST00000588692 SLC37A4O43826 429 aa16.28■□□□□ 0.2
DDX39A-208ENST00000588692 ZNF862O60290 1169 aa16.28■□□□□ 0.2
DDX39A-208ENST00000588692 UPP2O95045 317 aa16.28■□□□□ 0.2
DDX39A-208ENST00000588692 TRIM29Q14134 588 aa16.28■□□□□ 0.2
DDX39A-208ENST00000588692 ODR4Q5SWX8 454 aa16.28■□□□□ 0.2
DDX39A-208ENST00000588692 SPRED2Q7Z698 418 aa16.28■□□□□ 0.2
DDX39A-208ENST00000588692 OXER1Q8TDS5 423 aa16.28■□□□□ 0.2
DDX39A-208ENST00000588692 PPM1EQ8WY54 764 aa16.28■□□□□ 0.2
DDX39A-208ENST00000588692 GJA10Q969M2 543 aa16.28■□□□□ 0.2
DDX39A-208ENST00000588692 KCNMB3Q9NPA1 279 aa16.28■□□□□ 0.2
DDX39A-208ENST00000588692 LMCD1Q9NZU5 365 aa16.28■□□□□ 0.2
DDX39A-208ENST00000588692 PADI3Q9ULW8 664 aa16.28■□□□□ 0.2
DDX39A-208ENST00000588692 MTCH2Q9Y6C9 303 aa16.28■□□□□ 0.2
DDX39A-208ENST00000588692 RBAK-RBAKDNI3L0D1 243 aa16.27■□□□□ 0.19
DDX39A-208ENST00000588692 DLL1O00548 723 aa16.27■□□□□ 0.19
DDX39A-208ENST00000588692 ENPP3O14638 875 aa16.27■□□□□ 0.19
DDX39A-208ENST00000588692 CCNT1O60563 726 aaKnown RBP16.27■□□□□ 0.19
DDX39A-208ENST00000588692 TMOD1P28289 359 aa16.27■□□□□ 0.19
DDX39A-208ENST00000588692 GRB10Q13322 594 aa16.27■□□□□ 0.19
DDX39A-208ENST00000588692 CCDC85BQ15834 202 aaPredicted RBP16.27■□□□□ 0.19
DDX39A-208ENST00000588692 UGCGQ16739 394 aa16.27■□□□□ 0.19
DDX39A-208ENST00000588692 TSPYL2Q9H2G4 693 aaPredicted RBP16.27■□□□□ 0.19
DDX39A-208ENST00000588692 PRRC2BQ5JSZ5 2229 aaKnown RBP16.27■□□□□ 0.19
DDX39A-208ENST00000588692 JAK2O60674 1132 aa16.26■□□□□ 0.19
DDX39A-208ENST00000588692 LPXNO60711 386 aa16.26■□□□□ 0.19
DDX39A-208ENST00000588692 MMP1P03956 469 aa16.26■□□□□ 0.19
DDX39A-208ENST00000588692 PPP2R5CQ13362 524 aa16.26■□□□□ 0.19
DDX39A-208ENST00000588692 XKR3Q5GH77 459 aa16.26■□□□□ 0.19
DDX39A-208ENST00000588692 TRMT1LQ7Z2T5 733 aaKnown RBP16.26■□□□□ 0.19
DDX39A-208ENST00000588692 METTL13Q8N6R0 699 aa16.26■□□□□ 0.19
DDX39A-208ENST00000588692 LINC01465Q8N7H1 131 aa16.26■□□□□ 0.19
DDX39A-208ENST00000588692 TNFRSF25Q93038 417 aa16.26■□□□□ 0.19
DDX39A-208ENST00000588692 MAP7D2Q96T17 732 aa16.26■□□□□ 0.19
DDX39A-208ENST00000588692 LLPHQ9BRT6 129 aaKnown RBP16.26■□□□□ 0.19
DDX39A-208ENST00000588692 THEGQ9P2T0 379 aa16.26■□□□□ 0.19
DDX39A-208ENST00000588692 MTUS1Q9ULD2 1270 aa16.26■□□□□ 0.19
DDX39A-208ENST00000588692 CUL9Q8IWT3 2517 aa16.25■□□□□ 0.19
DDX39A-208ENST00000588692 ADGRA3Q8IWK6 1321 aa16.25■□□□□ 0.19
DDX39A-208ENST00000588692 DTNBO60941 627 aa16.25■□□□□ 0.19
DDX39A-208ENST00000588692 RPS6KA5O75582 802 aa16.25■□□□□ 0.19
DDX39A-208ENST00000588692 CRYBB1P53674 252 aaPredicted RBP16.25■□□□□ 0.19
DDX39A-208ENST00000588692 ST3GAL1Q11201 340 aa16.25■□□□□ 0.19
DDX39A-208ENST00000588692 NR5A1Q13285 461 aa16.25■□□□□ 0.19
DDX39A-208ENST00000588692 MICALL1Q8N3F8 863 aa16.25■□□□□ 0.19
DDX39A-208ENST00000588692 FBXO22Q8NEZ5 403 aa16.25■□□□□ 0.19
DDX39A-208ENST00000588692 GDPD5Q8WTR4 605 aa16.25■□□□□ 0.19
DDX39A-208ENST00000588692 ATXN2LQ8WWM7 1075 aaKnown RBP16.25■□□□□ 0.19
DDX39A-208ENST00000588692 LINC01599Q8WXQ3 324 aa16.25■□□□□ 0.19
DDX39A-208ENST00000588692 ZSCAN31Q96LW9 406 aaPredicted RBP16.25■□□□□ 0.19
DDX39A-208ENST00000588692 NIFKQ9BYG3 293 aaKnown RBP16.25■□□□□ 0.19
DDX39A-208ENST00000588692 SUGCTQ9HAC7 445 aa16.25■□□□□ 0.19
DDX39A-208ENST00000588692 RC3H2Q9HBD1 1191 aaKnown RBP16.25■□□□□ 0.19
DDX39A-208ENST00000588692 VAV3Q9UKW4 847 aa16.25■□□□□ 0.19
DDX39A-208ENST00000588692 GINS2Q9Y248 185 aa16.25■□□□□ 0.19
DDX39A-208ENST00000588692 GPR182O15218 404 aa16.24■□□□□ 0.19
DDX39A-208ENST00000588692 DKC1O60832 514 aaKnown RBP eCLIP16.24■□□□□ 0.19
DDX39A-208ENST00000588692 STAG3L1P0CL83 205 aa16.24■□□□□ 0.19
DDX39A-208ENST00000588692 RBM25P49756 843 aaKnown RBP16.24■□□□□ 0.19
DDX39A-208ENST00000588692 PSMC5P62195 406 aa16.24■□□□□ 0.19
DDX39A-208ENST00000588692 TBC1D8BQ0IIM8 1120 aa16.24■□□□□ 0.19
DDX39A-208ENST00000588692 TARBP2Q15633 366 aaKnown RBP16.24■□□□□ 0.19
DDX39A-208ENST00000588692 EARS2Q5JPH6 523 aaKnown RBP16.24■□□□□ 0.19
DDX39A-208ENST00000588692 KRT40Q6A162 431 aa16.24■□□□□ 0.19
DDX39A-208ENST00000588692 EFCAB12Q6NXP0 572 aa16.24■□□□□ 0.19
DDX39A-208ENST00000588692 NPAS4Q8IUM7 802 aa16.24■□□□□ 0.19
DDX39A-208ENST00000588692 DIS3L2Q8IYB7 885 aaKnown RBP16.24■□□□□ 0.19
DDX39A-208ENST00000588692 SLFN12Q8IYM2 578 aa16.24■□□□□ 0.19
DDX39A-208ENST00000588692 FIBCD1Q8N539 461 aa16.24■□□□□ 0.19
DDX39A-208ENST00000588692 KIF2CQ99661 725 aa16.24■□□□□ 0.19
DDX39A-208ENST00000588692 C17orf80Q9BSJ5 609 aa16.24■□□□□ 0.19
DDX39A-208ENST00000588692 ERVK-5Q9HDB9 667 aa16.24■□□□□ 0.19
DDX39A-208ENST00000588692 SH2B1Q9NRF2 756 aaPredicted RBP16.24■□□□□ 0.19
DDX39A-208ENST00000588692 RNF216Q9NWF9 866 aaPredicted RBP16.24■□□□□ 0.19
DDX39A-208ENST00000588692 SEPT9Q9UHD8 586 aaPredicted RBP16.24■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms