RNA–Protein interactions for RNA: ENST00000588032.5

TPM4-207, Transcript of tropomyosin 4, humanhuman

TSL 3

Gene TPM4, Length 712 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM4-207ENST00000588032 SLC9A7Q96T83 725 aa11.35□□□□□ -0.59
TPM4-207ENST00000588032 FAM49AQ9H0Q0 323 aaPredicted RBP11.35□□□□□ -0.59
TPM4-207ENST00000588032 CXXC1Q9P0U4 656 aaPredicted RBP11.35□□□□□ -0.59
TPM4-207ENST00000588032 PPME1Q9Y570 386 aa11.35□□□□□ -0.59
TPM4-207ENST00000588032 KDM3AQ9Y4C1 1321 aa11.35□□□□□ -0.59
TPM4-207ENST00000588032 LAD1O00515 517 aa11.34□□□□□ -0.59
TPM4-207ENST00000588032 C22orf31O95567 290 aa11.34□□□□□ -0.59
TPM4-207ENST00000588032 ATP2A2P16615 1042 aaKnown RBP11.34□□□□□ -0.59
TPM4-207ENST00000588032 KCNJ6P48051 423 aa11.34□□□□□ -0.59
TPM4-207ENST00000588032 CDC42EP1Q00587 391 aa11.34□□□□□ -0.59
TPM4-207ENST00000588032 MGAT3Q09327 533 aa11.34□□□□□ -0.59
TPM4-207ENST00000588032 TBC1D8BQ0IIM8 1120 aa11.34□□□□□ -0.59
TPM4-207ENST00000588032 TARBP2Q15633 366 aaKnown RBP11.34□□□□□ -0.59
TPM4-207ENST00000588032 ZNF174Q15697 407 aa11.34□□□□□ -0.59
TPM4-207ENST00000588032 RAB30Q15771 203 aa11.34□□□□□ -0.59
TPM4-207ENST00000588032 UGCGQ16739 394 aa11.34□□□□□ -0.59
TPM4-207ENST00000588032 RILPL1Q5EBL4 403 aa11.34□□□□□ -0.59
TPM4-207ENST00000588032 ODR4Q5SWX8 454 aa11.34□□□□□ -0.59
TPM4-207ENST00000588032 MCTP1Q6DN14 999 aa11.34□□□□□ -0.59
TPM4-207ENST00000588032 NCAPH2Q6IBW4 605 aa11.34□□□□□ -0.59
TPM4-207ENST00000588032 OTUD6AQ7L8S5 288 aa11.34□□□□□ -0.59
TPM4-207ENST00000588032 TRMT1LQ7Z2T5 733 aaKnown RBP11.34□□□□□ -0.59
TPM4-207ENST00000588032 KIAA0319LQ8IZA0 1049 aa11.34□□□□□ -0.59
TPM4-207ENST00000588032 DBF4BQ8NFT6 615 aa11.34□□□□□ -0.59
TPM4-207ENST00000588032 JPH2Q9BR39 696 aaPredicted RBP11.34□□□□□ -0.59
TPM4-207ENST00000588032 CELF4Q9BZC1 486 aaKnown RBP11.34□□□□□ -0.59
TPM4-207ENST00000588032 ZSWIM4Q9H7M6 989 aa11.34□□□□□ -0.59
TPM4-207ENST00000588032 MSRAQ9UJ68 235 aa11.34□□□□□ -0.59
TPM4-207ENST00000588032 TRPV2Q9Y5S1 764 aa11.34□□□□□ -0.59
TPM4-207ENST00000588032 CDY2AQ9Y6F7 541 aa11.34□□□□□ -0.59
TPM4-207ENST00000588032 KAT6AQ92794 2004 aa11.33□□□□□ -0.6
TPM4-207ENST00000588032 DDX11L8A8MPP1 907 aa11.33□□□□□ -0.6
TPM4-207ENST00000588032 KIF28PB7ZC32 967 aa11.33□□□□□ -0.6
TPM4-207ENST00000588032 WNT7AO00755 349 aa11.33□□□□□ -0.6
TPM4-207ENST00000588032 STBD1O95210 358 aa11.33□□□□□ -0.6
TPM4-207ENST00000588032 LYPLA2O95372 231 aa11.33□□□□□ -0.6
TPM4-207ENST00000588032 OR52Z1P0C646 297 aa11.33□□□□□ -0.6
TPM4-207ENST00000588032 XRCC6P12956 609 aaKnown RBP eCLIP11.33□□□□□ -0.6
TPM4-207ENST00000588032 PDIA4P13667 645 aaKnown RBP11.33□□□□□ -0.6
TPM4-207ENST00000588032 DNM2P50570 870 aa11.33□□□□□ -0.6
TPM4-207ENST00000588032 FBXO47Q5MNV8 452 aa11.33□□□□□ -0.6
TPM4-207ENST00000588032 ZNF697Q5TEC3 545 aa11.33□□□□□ -0.6
TPM4-207ENST00000588032 EFCAB12Q6NXP0 572 aa11.33□□□□□ -0.6
TPM4-207ENST00000588032 METTL13Q8N6R0 699 aa11.33□□□□□ -0.6
TPM4-207ENST00000588032 BANK1Q8NDB2 785 aa11.33□□□□□ -0.6
TPM4-207ENST00000588032 MAP7D2Q96T17 732 aa11.33□□□□□ -0.6
TPM4-207ENST00000588032 HSD17B14Q9BPX1 270 aa11.33□□□□□ -0.6
TPM4-207ENST00000588032 IFIH1Q9BYX4 1025 aaKnown RBP11.33□□□□□ -0.6
TPM4-207ENST00000588032 SEPT9Q9UHD8 586 aaPredicted RBP11.33□□□□□ -0.6
TPM4-207ENST00000588032 PCDHA11Q9Y5I1 949 aa11.33□□□□□ -0.6
TPM4-207ENST00000588032 STK24Q9Y6E0 443 aa11.33□□□□□ -0.6
TPM4-207ENST00000588032 TANC1Q9C0D5 1861 aa11.33□□□□□ -0.6
TPM4-207ENST00000588032 TRIP12Q14669 1992 aaPredicted RBP11.32□□□□□ -0.6
TPM4-207ENST00000588032 SLITRK3O94933 977 aa11.32□□□□□ -0.6
TPM4-207ENST00000588032 AMHP03971 560 aa11.32□□□□□ -0.6
TPM4-207ENST00000588032 DNAJB2P25686 324 aa11.32□□□□□ -0.6
TPM4-207ENST00000588032 TOB1P50616 345 aaPredicted RBP11.32□□□□□ -0.6
TPM4-207ENST00000588032 WDR5P61964 334 aaKnown RBP11.32□□□□□ -0.6
TPM4-207ENST00000588032 PDIA5Q14554 519 aa11.32□□□□□ -0.6
TPM4-207ENST00000588032 LPIN1Q14693 890 aa11.32□□□□□ -0.6
TPM4-207ENST00000588032 TMEM266Q2M3C6 531 aa11.32□□□□□ -0.6
TPM4-207ENST00000588032 TSHZ1Q6ZSZ6 1077 aa11.32□□□□□ -0.6
TPM4-207ENST00000588032 ANO5Q75V66 913 aa11.32□□□□□ -0.6
TPM4-207ENST00000588032 BRAPQ7Z569 592 aa11.32□□□□□ -0.6
TPM4-207ENST00000588032 TPH2Q8IWU9 490 aa11.32□□□□□ -0.6
TPM4-207ENST00000588032 DEFB123Q8N688 67 aa11.32□□□□□ -0.6
TPM4-207ENST00000588032 ERMNQ8TAM6 284 aa11.32□□□□□ -0.6
TPM4-207ENST00000588032 TIFAQ96CG3 184 aa11.32□□□□□ -0.6
TPM4-207ENST00000588032 ZBTB10Q96DT7 871 aa11.32□□□□□ -0.6
TPM4-207ENST00000588032 DYDC2Q96IM9 177 aa11.32□□□□□ -0.6
TPM4-207ENST00000588032 EIF2AK1Q9BQI3 630 aaKnown RBP11.32□□□□□ -0.6
TPM4-207ENST00000588032 LXNQ9BS40 222 aa11.32□□□□□ -0.6
TPM4-207ENST00000588032 FTHL17Q9BXU8 183 aa11.32□□□□□ -0.6
TPM4-207ENST00000588032 PBX4Q9BYU1 374 aa11.32□□□□□ -0.6
TPM4-207ENST00000588032 RAB34Q9BZG1 259 aa11.32□□□□□ -0.6
TPM4-207ENST00000588032 TMEM60Q9H2L4 133 aa11.32□□□□□ -0.6
TPM4-207ENST00000588032 CYP26B1Q9NR63 512 aa11.32□□□□□ -0.6
TPM4-207ENST00000588032 RGL1Q9NZL6 768 aa11.32□□□□□ -0.6
TPM4-207ENST00000588032 TRIOBPQ9H2D6 2365 aa11.31□□□□□ -0.6
TPM4-207ENST00000588032 IGKV6-21A0A0C4DH24 114 aa11.31□□□□□ -0.6
TPM4-207ENST00000588032 GRXCR1A8MXD5 290 aa11.31□□□□□ -0.6
TPM4-207ENST00000588032 GPR182O15218 404 aa11.31□□□□□ -0.6
TPM4-207ENST00000588032 GAS2O43903 313 aaKnown RBP11.31□□□□□ -0.6
TPM4-207ENST00000588032 MAFO75444 373 aaPredicted RBP11.31□□□□□ -0.6
TPM4-207ENST00000588032 SLC34A2O95436 690 aa11.31□□□□□ -0.6
TPM4-207ENST00000588032 GHRP10912 638 aa11.31□□□□□ -0.6
TPM4-207ENST00000588032 MUTP22033 750 aa11.31□□□□□ -0.6
TPM4-207ENST00000588032 YWHABP31946 246 aaKnown RBP11.31□□□□□ -0.6
TPM4-207ENST00000588032 RFC5P40937 340 aa11.31□□□□□ -0.6
TPM4-207ENST00000588032 PRPHP41219 470 aa11.31□□□□□ -0.6
TPM4-207ENST00000588032 TECP42680 631 aa11.31□□□□□ -0.6
TPM4-207ENST00000588032 FXR2P51116 673 aaKnown RBP eCLIP11.31□□□□□ -0.6
TPM4-207ENST00000588032 CRYBB1P53674 252 aaPredicted RBP11.31□□□□□ -0.6
TPM4-207ENST00000588032 PTGDRQ13258 359 aa11.31□□□□□ -0.6
TPM4-207ENST00000588032 CTTNQ14247 550 aaKnown RBP11.31□□□□□ -0.6
TPM4-207ENST00000588032 MTERF2Q49AM1 385 aa11.31□□□□□ -0.6
TPM4-207ENST00000588032 HERC6Q8IVU3 1022 aa11.31□□□□□ -0.6
TPM4-207ENST00000588032 HSCBQ8IWL3 235 aa11.31□□□□□ -0.6
TPM4-207ENST00000588032 LINC01465Q8N7H1 131 aa11.31□□□□□ -0.6
TPM4-207ENST00000588032 C4orf32Q8N8J7 132 aa11.31□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 31.2 ms