RNA–Protein interactions for RNA: ENST00000587427.5

GHDC-207, Transcript of GH3 domain containing, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene GHDC, Length 2,396 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GHDC-207ENST00000587427 RAPGEF1Q13905 1077 aa17.47■□□□□ 0.39
GHDC-207ENST00000587427 ODF2Q5BJF6 829 aa17.47■□□□□ 0.39
GHDC-207ENST00000587427 TAX1BP1Q86VP1 789 aa17.47■□□□□ 0.39
GHDC-207ENST00000587427 PARP9Q8IXQ6 854 aa17.47■□□□□ 0.39
GHDC-207ENST00000587427 ZNF444Q8N0Y2 327 aaPredicted RBP17.47■□□□□ 0.39
GHDC-207ENST00000587427 REXO1Q8N1G1 1221 aaKnown RBP17.47■□□□□ 0.39
GHDC-207ENST00000587427 MAGEC3Q8TD91 643 aa17.47■□□□□ 0.39
GHDC-207ENST00000587427 ZNF526Q8TF50 670 aaPredicted RBP17.47■□□□□ 0.39
GHDC-207ENST00000587427 CPVLQ9H3G5 476 aa17.47■□□□□ 0.39
GHDC-207ENST00000587427 GOLPH3Q9H4A6 298 aa17.47■□□□□ 0.39
GHDC-207ENST00000587427 ODF2LQ9ULJ1 636 aa17.47■□□□□ 0.39
GHDC-207ENST00000587427 SMARCA1P28370 1054 aa17.47■□□□□ 0.39
GHDC-207ENST00000587427 FLT3P36888 993 aa17.47■□□□□ 0.39
GHDC-207ENST00000587427 IFI16Q16666 785 aaKnown RBP17.47■□□□□ 0.39
GHDC-207ENST00000587427 LACTB2Q53H82 288 aaPredicted RBP17.47■□□□□ 0.39
GHDC-207ENST00000587427 ANKRD20A8PQ5CZ79 823 aa17.47■□□□□ 0.39
GHDC-207ENST00000587427 P3H4Q92791 437 aa17.47■□□□□ 0.39
GHDC-207ENST00000587427 SEC16BQ96JE7 1060 aa17.47■□□□□ 0.39
GHDC-207ENST00000587427 NEUROG2Q9H2A3 272 aa17.47■□□□□ 0.39
GHDC-207ENST00000587427 GANQ9H2C0 597 aa17.47■□□□□ 0.39
GHDC-207ENST00000587427 KANSL2Q9H9L4 492 aa17.47■□□□□ 0.39
GHDC-207ENST00000587427 DCDC2CA8MYV0 355 aa17.46■□□□□ 0.39
GHDC-207ENST00000587427 NF2P35240 595 aa17.46■□□□□ 0.39
GHDC-207ENST00000587427 COASYQ13057 564 aa17.46■□□□□ 0.39
GHDC-207ENST00000587427 SNCBQ16143 134 aa17.46■□□□□ 0.39
GHDC-207ENST00000587427 KRT79Q5XKE5 535 aa17.46■□□□□ 0.39
GHDC-207ENST00000587427 LRRC57Q8N9N7 239 aa17.46■□□□□ 0.39
GHDC-207ENST00000587427 SCLT1Q96NL6 688 aa17.46■□□□□ 0.39
GHDC-207ENST00000587427 STX8Q9UNK0 236 aa17.46■□□□□ 0.39
GHDC-207ENST00000587427 UTP18Q9Y5J1 556 aaKnown RBP eCLIP17.46■□□□□ 0.39
GHDC-207ENST00000587427 TMCO5BA8MYB1 307 aa17.46■□□□□ 0.39
GHDC-207ENST00000587427 KIF1CO43896 1103 aaKnown RBP17.46■□□□□ 0.39
GHDC-207ENST00000587427 ZBTB48P10074 688 aaPredicted RBP17.46■□□□□ 0.39
GHDC-207ENST00000587427 MFSD14BQ5SR56 506 aa17.46■□□□□ 0.39
GHDC-207ENST00000587427 KCNK18Q7Z418 384 aa17.46■□□□□ 0.39
GHDC-207ENST00000587427 DNAAF5Q86Y56 855 aa17.46■□□□□ 0.39
GHDC-207ENST00000587427 FAM133AQ8N9E0 248 aa17.46■□□□□ 0.39
GHDC-207ENST00000587427 SNX29Q8TEQ0 813 aa17.46■□□□□ 0.39
GHDC-207ENST00000587427 DNAJC19Q96DA6 116 aa17.46■□□□□ 0.39
GHDC-207ENST00000587427 AP1M1Q9BXS5 423 aa17.46■□□□□ 0.39
GHDC-207ENST00000587427 VPS33BQ9H267 617 aa17.46■□□□□ 0.39
GHDC-207ENST00000587427 BIN2Q9UBW5 565 aaPredicted RBP17.46■□□□□ 0.39
GHDC-207ENST00000587427 SEC63Q9UGP8 760 aaKnown RBP17.46■□□□□ 0.39
GHDC-207ENST00000587427 EPB41L3Q9Y2J2 1087 aaPredicted RBP17.46■□□□□ 0.39
GHDC-207ENST00000587427 MAST2Q6P0Q8 1798 aa17.46■□□□□ 0.39
GHDC-207ENST00000587427 DICER1Q9UPY3 1922 aaKnown RBP17.46■□□□□ 0.38
GHDC-207ENST00000587427 CCDC188H7C350 402 aa17.45■□□□□ 0.38
GHDC-207ENST00000587427 PGRMC1O00264 195 aaKnown RBP17.45■□□□□ 0.38
GHDC-207ENST00000587427 SART1O43290 800 aaKnown RBP17.45■□□□□ 0.38
GHDC-207ENST00000587427 CEP104O60308 925 aa17.45■□□□□ 0.38
GHDC-207ENST00000587427 BYSLQ13895 437 aaKnown RBP17.45■□□□□ 0.38
GHDC-207ENST00000587427 DACT2Q5SW24 774 aa17.45■□□□□ 0.38
GHDC-207ENST00000587427 SPTY2D1Q68D10 685 aaPredicted RBP17.45■□□□□ 0.38
GHDC-207ENST00000587427 CACNA2D3Q8IZS8 1091 aa17.45■□□□□ 0.38
GHDC-207ENST00000587427 BANK1Q8NDB2 785 aa17.45■□□□□ 0.38
GHDC-207ENST00000587427 RAPGEF5Q92565 580 aa17.45■□□□□ 0.38
GHDC-207ENST00000587427 TATDN2Q93075 761 aa17.45■□□□□ 0.38
GHDC-207ENST00000587427 SGSM3Q96HU1 749 aa17.45■□□□□ 0.38
GHDC-207ENST00000587427 BUD13Q9BRD0 619 aaKnown RBP eCLIP17.45■□□□□ 0.384e-6■□□□□ 8
GHDC-207ENST00000587427 LRRC4CQ9HCJ2 640 aa17.45■□□□□ 0.38
GHDC-207ENST00000587427 FBXL5Q9UKA1 691 aa17.45■□□□□ 0.38
GHDC-207ENST00000587427 TPX2Q9ULW0 747 aaKnown RBP17.45■□□□□ 0.38
GHDC-207ENST00000587427 PHF20L1A8MW92 1017 aa17.45■□□□□ 0.38
GHDC-207ENST00000587427 OPLAHO14841 1288 aa17.45■□□□□ 0.38
GHDC-207ENST00000587427 EIF6P56537 245 aaKnown RBP17.45■□□□□ 0.38
GHDC-207ENST00000587427 E2F5Q15329 346 aa17.45■□□□□ 0.38
GHDC-207ENST00000587427 FAM26FQ5R3K3 315 aa17.45■□□□□ 0.38
GHDC-207ENST00000587427 CIAPIN1Q6FI81 312 aa17.45■□□□□ 0.38
GHDC-207ENST00000587427 CHADLQ6NUI6 762 aa17.45■□□□□ 0.38
GHDC-207ENST00000587427 DZIP1Q86YF9 867 aaKnown RBP17.45■□□□□ 0.38
GHDC-207ENST00000587427 KIAA0825Q8IV33 1275 aa17.45■□□□□ 0.38
GHDC-207ENST00000587427 UBLCP1Q8WVY7 318 aaPredicted RBP17.45■□□□□ 0.38
GHDC-207ENST00000587427 NUDT12Q9BQG2 462 aa17.45■□□□□ 0.38
GHDC-207ENST00000587427 TMEM260Q9NX78 707 aa17.45■□□□□ 0.38
GHDC-207ENST00000587427 NOVA2Q9UNW9 492 aaKnown RBP17.45■□□□□ 0.38
GHDC-207ENST00000587427 POTEMA6NI47 508 aa17.44■□□□□ 0.38
GHDC-207ENST00000587427 SLC37A4O43826 429 aa17.44■□□□□ 0.38
GHDC-207ENST00000587427 RASA1P20936 1047 aa17.44■□□□□ 0.38
GHDC-207ENST00000587427 SCTRP47872 440 aa17.44■□□□□ 0.38
GHDC-207ENST00000587427 ZC3H3Q8IXZ2 948 aaKnown RBP17.44■□□□□ 0.38
GHDC-207ENST00000587427 SEC14L1Q92503 715 aa17.44■□□□□ 0.38
GHDC-207ENST00000587427 SLITRK6Q9H5Y7 841 aa17.44■□□□□ 0.38
GHDC-207ENST00000587427 PCDHAC2Q9Y5I4 1007 aa17.44■□□□□ 0.38
GHDC-207ENST00000587427 BZW2Q9Y6E2 419 aaKnown RBP17.44■□□□□ 0.38
GHDC-207ENST00000587427 ATP8B3O60423 1300 aa17.44■□□□□ 0.38
GHDC-207ENST00000587427 RASGEF1CQ8N431 466 aa17.44■□□□□ 0.38
GHDC-207ENST00000587427 VEZTQ9HBM0 779 aa17.44■□□□□ 0.38
GHDC-207ENST00000587427 PANK4Q9NVE7 773 aa17.44■□□□□ 0.38
GHDC-207ENST00000587427 NOC2LQ9Y3T9 749 aaKnown RBP17.44■□□□□ 0.38
GHDC-207ENST00000587427 hCG_1984214I3L0E3 225 aa17.43■□□□□ 0.38
GHDC-207ENST00000587427 EDIL3O43854 480 aa17.43■□□□□ 0.38
GHDC-207ENST00000587427 ECM2O94769 699 aaPredicted RBP17.43■□□□□ 0.38
GHDC-207ENST00000587427 GHRP10912 638 aa17.43■□□□□ 0.38
GHDC-207ENST00000587427 SCNN1DP51172 638 aa17.43■□□□□ 0.38
GHDC-207ENST00000587427 STRIP1Q5VSL9 837 aa17.43■□□□□ 0.38
GHDC-207ENST00000587427 IRF2BP2Q7Z5L9 587 aa17.43■□□□□ 0.38
GHDC-207ENST00000587427 TMC3Q7Z5M5 1100 aa17.43■□□□□ 0.38
GHDC-207ENST00000587427 ZNF713Q8N859 430 aaPredicted RBP17.43■□□□□ 0.38
GHDC-207ENST00000587427 SLC44A5Q8NCS7 719 aa17.43■□□□□ 0.38
GHDC-207ENST00000587427 DDX47Q9H0S4 455 aaKnown RBP17.43■□□□□ 0.38
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms