RNA–Protein interactions for RNA: ENST00000587220.5

ZNF540-205, Transcript of zinc finger protein 540, humanhuman

TSL 2

Gene ZNF540, Length 576 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF540-205ENST00000587220 PADI3Q9ULW8 664 aa12.06□□□□□ -0.48
ZNF540-205ENST00000587220 PCDHA4Q9UN74 947 aa12.06□□□□□ -0.48
ZNF540-205ENST00000587220 RWDD3Q9Y3V2 267 aa12.06□□□□□ -0.48
ZNF540-205ENST00000587220 LOXHD1Q8IVV2 1947 aa12.05□□□□□ -0.48
ZNF540-205ENST00000587220 TCF20Q9UGU0 1960 aaKnown RBP12.05□□□□□ -0.48
ZNF540-205ENST00000587220 H3BNC9 293 aa12.05□□□□□ -0.48
ZNF540-205ENST00000587220 CHMP2AO43633 222 aa12.05□□□□□ -0.48
ZNF540-205ENST00000587220 STAG3L1P0CL83 205 aa12.05□□□□□ -0.48
ZNF540-205ENST00000587220 BMP1P13497 986 aa12.05□□□□□ -0.48
ZNF540-205ENST00000587220 TIGD5Q53EQ6 642 aa12.05□□□□□ -0.48
ZNF540-205ENST00000587220 ODR4Q5SWX8 454 aa12.05□□□□□ -0.48
ZNF540-205ENST00000587220 LRCH2Q5VUJ6 765 aa12.05□□□□□ -0.48
ZNF540-205ENST00000587220 BLIDQ8IZY5 108 aa12.05□□□□□ -0.48
ZNF540-205ENST00000587220 TBCKQ8TEA7 893 aa12.05□□□□□ -0.48
ZNF540-205ENST00000587220 RIT2Q99578 217 aa12.05□□□□□ -0.48
ZNF540-205ENST00000587220 C11orf84Q9BUA3 381 aaPredicted RBP12.05□□□□□ -0.48
ZNF540-205ENST00000587220 LRFN2Q9ULH4 789 aa12.05□□□□□ -0.48
ZNF540-205ENST00000587220 MAFBQ9Y5Q3 323 aaPredicted RBP12.05□□□□□ -0.48
ZNF540-205ENST00000587220 BDP1A6H8Y1 2624 aa12.04□□□□□ -0.48
ZNF540-205ENST00000587220 DENND3A2RUS2 1198 aa12.04□□□□□ -0.48
ZNF540-205ENST00000587220 MSH4O15457 936 aa12.04□□□□□ -0.48
ZNF540-205ENST00000587220 RPS6KA5O75582 802 aa12.04□□□□□ -0.48
ZNF540-205ENST00000587220 XBP1P17861 261 aa12.04□□□□□ -0.48
ZNF540-205ENST00000587220 SFNP31947 248 aa12.04□□□□□ -0.48
ZNF540-205ENST00000587220 TMEM266Q2M3C6 531 aa12.04□□□□□ -0.48
ZNF540-205ENST00000587220 GALNT17Q6IS24 598 aa12.04□□□□□ -0.48
ZNF540-205ENST00000587220 EP400NLQ6ZTU2 488 aa12.04□□□□□ -0.48
ZNF540-205ENST00000587220 NPAS4Q8IUM7 802 aa12.04□□□□□ -0.48
ZNF540-205ENST00000587220 KIAA0319LQ8IZA0 1049 aa12.04□□□□□ -0.48
ZNF540-205ENST00000587220 BANK1Q8NDB2 785 aa12.04□□□□□ -0.48
ZNF540-205ENST00000587220 LENG9Q96B70 501 aa12.04□□□□□ -0.48
ZNF540-205ENST00000587220 NECAB3Q96P71 396 aaPredicted RBP12.04□□□□□ -0.48
ZNF540-205ENST00000587220 MAP7D2Q96T17 732 aa12.04□□□□□ -0.48
ZNF540-205ENST00000587220 PPP1R16BQ96T49 567 aa12.04□□□□□ -0.48
ZNF540-205ENST00000587220 TEKT3Q9BXF9 490 aa12.04□□□□□ -0.48
ZNF540-205ENST00000587220 SLKQ9H2G2 1235 aaPredicted RBP12.04□□□□□ -0.48
ZNF540-205ENST00000587220 DISC1Q9NRI5 854 aa12.04□□□□□ -0.48
ZNF540-205ENST00000587220 NRBP2Q9NSY0 501 aa12.04□□□□□ -0.48
ZNF540-205ENST00000587220 RNF216Q9NWF9 866 aaPredicted RBP12.04□□□□□ -0.48
ZNF540-205ENST00000587220 KDM3AQ9Y4C1 1321 aa12.04□□□□□ -0.48
ZNF540-205ENST00000587220 GPR182O15218 404 aa12.03□□□□□ -0.48
ZNF540-205ENST00000587220 MAGEB2O15479 319 aa12.03□□□□□ -0.48
ZNF540-205ENST00000587220 DGKIO75912 1065 aa12.03□□□□□ -0.48
ZNF540-205ENST00000587220 C22orf31O95567 290 aa12.03□□□□□ -0.48
ZNF540-205ENST00000587220 VTNP04004 478 aa12.03□□□□□ -0.48
ZNF540-205ENST00000587220 OATP04181 439 aa12.03□□□□□ -0.48
ZNF540-205ENST00000587220 RB1P06400 928 aa12.03□□□□□ -0.48
ZNF540-205ENST00000587220 ATP4AP20648 1035 aa12.03□□□□□ -0.48
ZNF540-205ENST00000587220 KCNA5P22460 613 aa12.03□□□□□ -0.48
ZNF540-205ENST00000587220 TMOD1P28289 359 aa12.03□□□□□ -0.48
ZNF540-205ENST00000587220 JAK3P52333 1124 aa12.03□□□□□ -0.48
ZNF540-205ENST00000587220 NONOQ15233 471 aaKnown RBP eCLIP12.03□□□□□ -0.48
ZNF540-205ENST00000587220 ANKRD1Q15327 319 aa12.03□□□□□ -0.48
ZNF540-205ENST00000587220 KIZQ2M2Z5 673 aa12.03□□□□□ -0.48
ZNF540-205ENST00000587220 PAN2Q504Q3 1202 aaKnown RBP12.03□□□□□ -0.48
ZNF540-205ENST00000587220 FAM43BQ6ZT52 329 aaPredicted RBP12.03□□□□□ -0.48
ZNF540-205ENST00000587220 CMTR2Q8IYT2 770 aaKnown RBP12.03□□□□□ -0.48
ZNF540-205ENST00000587220 FAM177A1Q8N128 213 aaPredicted RBP12.03□□□□□ -0.48
ZNF540-205ENST00000587220 LINC01599Q8WXQ3 324 aa12.03□□□□□ -0.48
ZNF540-205ENST00000587220 SCLT1Q96NL6 688 aa12.03□□□□□ -0.48
ZNF540-205ENST00000587220 AIFM3Q96NN9 605 aa12.03□□□□□ -0.48
ZNF540-205ENST00000587220 UBE2ZQ9H832 354 aaPredicted RBP12.03□□□□□ -0.48
ZNF540-205ENST00000587220 AKT3Q9Y243 479 aa12.03□□□□□ -0.48
ZNF540-205ENST00000587220 PCDHB7Q9Y5E2 793 aa12.03□□□□□ -0.48
ZNF540-205ENST00000587220 TTC3P53804 2025 aa12.03□□□□□ -0.48
ZNF540-205ENST00000587220 EVPLQ92817 2033 aa12.03□□□□□ -0.48
ZNF540-205ENST00000587220 CCDC194A0A1B0GVG4 234 aa12.02□□□□□ -0.49
ZNF540-205ENST00000587220 ZBTB42B2RXF5 422 aa12.02□□□□□ -0.49
ZNF540-205ENST00000587220 EIF5BO60841 1220 aaKnown RBP12.02□□□□□ -0.49
ZNF540-205ENST00000587220 CSPG5O95196 566 aa12.02□□□□□ -0.49
ZNF540-205ENST00000587220 TDP2O95551 362 aa12.02□□□□□ -0.49
ZNF540-205ENST00000587220 BMPR1AP36894 532 aa12.02□□□□□ -0.49
ZNF540-205ENST00000587220 ANP32AP39687 249 aaKnown RBP12.02□□□□□ -0.49
ZNF540-205ENST00000587220 CLCN3P51790 818 aa12.02□□□□□ -0.49
ZNF540-205ENST00000587220 CRYBB1P53674 252 aaPredicted RBP12.02□□□□□ -0.49
ZNF540-205ENST00000587220 PRKCEQ02156 737 aa12.02□□□□□ -0.49
ZNF540-205ENST00000587220 Q4G0T1 1027 aa12.02□□□□□ -0.49
ZNF540-205ENST00000587220 EFCAB12Q6NXP0 572 aa12.02□□□□□ -0.49
ZNF540-205ENST00000587220 MIER3Q7Z3K6 550 aa12.02□□□□□ -0.49
ZNF540-205ENST00000587220 KRT25Q7Z3Z0 450 aa12.02□□□□□ -0.49
ZNF540-205ENST00000587220 DAGLBQ8NCG7 672 aa12.02□□□□□ -0.49
ZNF540-205ENST00000587220 SLC5A5Q92911 643 aa12.02□□□□□ -0.49
ZNF540-205ENST00000587220 OSMRQ99650 979 aa12.02□□□□□ -0.49
ZNF540-205ENST00000587220 NSUN3Q9H649 340 aaKnown RBP12.02□□□□□ -0.49
ZNF540-205ENST00000587220 ST3GAL5Q9UNP4 418 aa12.02□□□□□ -0.49
ZNF540-205ENST00000587220 KCNJ14Q9UNX9 436 aa12.02□□□□□ -0.49
ZNF540-205ENST00000587220 NOC2LQ9Y3T9 749 aaKnown RBP12.02□□□□□ -0.49
ZNF540-205ENST00000587220 C5orf67F2Z3F1 127 aa12.01□□□□□ -0.49
ZNF540-205ENST00000587220 MARCH6O60337 910 aa12.01□□□□□ -0.49
ZNF540-205ENST00000587220 SARSP49591 514 aaKnown RBP12.01□□□□□ -0.49
ZNF540-205ENST00000587220 ANAPC15P60006 121 aa12.01□□□□□ -0.49
ZNF540-205ENST00000587220 TBC1D8BQ0IIM8 1120 aa12.01□□□□□ -0.49
ZNF540-205ENST00000587220 SCRN1Q12765 414 aa12.01□□□□□ -0.49
ZNF540-205ENST00000587220 LETM2Q2VYF4 491 aa12.01□□□□□ -0.49
ZNF540-205ENST00000587220 TCEAL5Q5H9L2 206 aa12.01□□□□□ -0.49
ZNF540-205ENST00000587220 SPOUT1Q5T280 376 aaKnown RBP12.01□□□□□ -0.49
ZNF540-205ENST00000587220 RTN4RL1Q86UN2 441 aaPredicted RBP12.01□□□□□ -0.49
ZNF540-205ENST00000587220 ZNF710Q8N1W2 664 aa12.01□□□□□ -0.49
ZNF540-205ENST00000587220 RDM1Q8NG50 284 aa12.01□□□□□ -0.49
ZNF540-205ENST00000587220 TMEM40Q8WWA1 233 aa12.01□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 18.6 ms