RNA–Protein interactions for RNA: ENST00000586833.5

TPM4-205, Transcript of tropomyosin 4, humanhuman

TSL 5

Gene TPM4, Length 558 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM4-205ENST00000586833 KRT79Q5XKE5 535 aa15.78■□□□□ 0.12
TPM4-205ENST00000586833 CNKSR3Q6P9H4 555 aa15.78■□□□□ 0.12
TPM4-205ENST00000586833 RUFY4Q6ZNE9 571 aa15.78■□□□□ 0.12
TPM4-205ENST00000586833 ZNF365Q70YC5 407 aa15.78■□□□□ 0.12
TPM4-205ENST00000586833 FERMT3Q86UX7 667 aa15.78■□□□□ 0.12
TPM4-205ENST00000586833 USP38Q8NB14 1042 aa15.78■□□□□ 0.12
TPM4-205ENST00000586833 HERVK_113Q902F9 699 aa15.78■□□□□ 0.12
TPM4-205ENST00000586833 SEPT8Q92599 483 aa15.78■□□□□ 0.12
TPM4-205ENST00000586833 POLR3CQ9BUI4 534 aaPredicted RBP15.78■□□□□ 0.12
TPM4-205ENST00000586833 TRPV2Q9Y5S1 764 aa15.78■□□□□ 0.12
TPM4-205ENST00000586833 ZBBXA8MT70 800 aa15.77■□□□□ 0.12
TPM4-205ENST00000586833 WNT7AO00755 349 aa15.77■□□□□ 0.12
TPM4-205ENST00000586833 SLITRK3O94933 977 aa15.77■□□□□ 0.12
TPM4-205ENST00000586833 C22orf31O95567 290 aa15.77■□□□□ 0.12
TPM4-205ENST00000586833 CXCL10P02778 98 aa15.77■□□□□ 0.12
TPM4-205ENST00000586833 XRCC6P12956 609 aaKnown RBP eCLIP15.77■□□□□ 0.12
TPM4-205ENST00000586833 KCNJ6P48051 423 aa15.77■□□□□ 0.12
TPM4-205ENST00000586833 POLGP54098 1239 aaPredicted RBP15.77■□□□□ 0.12
TPM4-205ENST00000586833 ATP2C1P98194 919 aaPredicted RBP15.77■□□□□ 0.12
TPM4-205ENST00000586833 CYP4A11Q02928 519 aa15.77■□□□□ 0.12
TPM4-205ENST00000586833 IKBKEQ14164 716 aa15.77■□□□□ 0.12
TPM4-205ENST00000586833 CTTNQ14247 550 aaKnown RBP15.77■□□□□ 0.12
TPM4-205ENST00000586833 NBR1Q14596 966 aa15.77■□□□□ 0.12
TPM4-205ENST00000586833 SHHQ15465 462 aa15.77■□□□□ 0.12
TPM4-205ENST00000586833 LRIT3Q3SXY7 679 aa15.77■□□□□ 0.12
TPM4-205ENST00000586833 TMEM240Q5SV17 173 aa15.77■□□□□ 0.12
TPM4-205ENST00000586833 TRAPPC12Q8WVT3 735 aa15.77■□□□□ 0.12
TPM4-205ENST00000586833 ZNF396Q96N95 335 aaPredicted RBP15.77■□□□□ 0.12
TPM4-205ENST00000586833 SCLT1Q96NL6 688 aa15.77■□□□□ 0.12
TPM4-205ENST00000586833 NACC1Q96RE7 527 aa15.77■□□□□ 0.12
TPM4-205ENST00000586833 BUD13Q9BRD0 619 aaKnown RBP eCLIP15.77■□□□□ 0.122e-12■■□□□ 12.2
TPM4-205ENST00000586833 CYP26B1Q9NR63 512 aa15.77■□□□□ 0.12
TPM4-205ENST00000586833 ANKEF1Q9NU02 776 aa15.77■□□□□ 0.12
TPM4-205ENST00000586833 RGL1Q9NZL6 768 aa15.77■□□□□ 0.12
TPM4-205ENST00000586833 DAXXQ9UER7 740 aaPredicted RBP15.77■□□□□ 0.12
TPM4-205ENST00000586833 MTMR6Q9Y217 621 aa15.77■□□□□ 0.12
TPM4-205ENST00000586833 AKT3Q9Y243 479 aa15.77■□□□□ 0.12
TPM4-205ENST00000586833 SQORQ9Y6N5 450 aa15.77■□□□□ 0.12
TPM4-205ENST00000586833 ABHD14A-ACY1A0A1B0GW23 586 aa15.76■□□□□ 0.11
TPM4-205ENST00000586833 POTEMA6NI47 508 aa15.76■□□□□ 0.11
TPM4-205ENST00000586833 RPA1P27694 616 aa15.76■□□□□ 0.11
TPM4-205ENST00000586833 CCT6AP40227 531 aaKnown RBP15.76■□□□□ 0.11
TPM4-205ENST00000586833 XKR9Q5GH70 373 aa15.76■□□□□ 0.11
TPM4-205ENST00000586833 EFCAB12Q6NXP0 572 aa15.76■□□□□ 0.11
TPM4-205ENST00000586833 KCTD17Q8N5Z5 321 aa15.76■□□□□ 0.11
TPM4-205ENST00000586833 C4orf32Q8N8J7 132 aa15.76■□□□□ 0.11
TPM4-205ENST00000586833 TCP11Q8WWU5 503 aa15.76■□□□□ 0.11
TPM4-205ENST00000586833 AK8Q96MA6 479 aa15.76■□□□□ 0.11
TPM4-205ENST00000586833 HSD17B14Q9BPX1 270 aa15.76■□□□□ 0.11
TPM4-205ENST00000586833 SUGCTQ9HAC7 445 aa15.76■□□□□ 0.11
TPM4-205ENST00000586833 CDY2AQ9Y6F7 541 aa15.76■□□□□ 0.11
TPM4-205ENST00000586833 SLC4A7Q9Y6M7 1214 aa15.76■□□□□ 0.11
TPM4-205ENST00000586833 KDM3AQ9Y4C1 1321 aa15.75■□□□□ 0.11
TPM4-205ENST00000586833 HSFX4A0A1B0GTS1 333 aaPredicted RBP15.75■□□□□ 0.11
TPM4-205ENST00000586833 HSFX3A0A1B0GWH4 333 aaPredicted RBP15.75■□□□□ 0.11
TPM4-205ENST00000586833 SLC26A4O43511 780 aa15.75■□□□□ 0.11
TPM4-205ENST00000586833 EPHB4P54760 987 aa15.75■□□□□ 0.11
TPM4-205ENST00000586833 RESTQ13127 1097 aa15.75■□□□□ 0.11
TPM4-205ENST00000586833 TARBP2Q15633 366 aaKnown RBP15.75■□□□□ 0.11
TPM4-205ENST00000586833 C9orf50Q5SZB4 431 aa15.75■□□□□ 0.11
TPM4-205ENST00000586833 ANO5Q75V66 913 aa15.75■□□□□ 0.11
TPM4-205ENST00000586833 OTOP2Q7RTS6 562 aa15.75■□□□□ 0.11
TPM4-205ENST00000586833 SPRYD3Q8NCJ5 442 aa15.75■□□□□ 0.11
TPM4-205ENST00000586833 SNX29Q8TEQ0 813 aa15.75■□□□□ 0.11
TPM4-205ENST00000586833 WNT8BQ93098 351 aa15.75■□□□□ 0.11
TPM4-205ENST00000586833 CDK5RAP3Q96JB5 506 aa15.75■□□□□ 0.11
TPM4-205ENST00000586833 CELF4Q9BZC1 486 aaKnown RBP15.75■□□□□ 0.11
TPM4-205ENST00000586833 RNF216Q9NWF9 866 aaPredicted RBP15.75■□□□□ 0.11
TPM4-205ENST00000586833 PDE4DIPQ5VU43 2346 aa15.75■□□□□ 0.11
TPM4-205ENST00000586833 MYH7BA7E2Y1 1941 aa15.74■□□□□ 0.11
TPM4-205ENST00000586833 ZBTB42B2RXF5 422 aa15.74■□□□□ 0.11
TPM4-205ENST00000586833 NBNO60934 754 aa15.74■□□□□ 0.11
TPM4-205ENST00000586833 MAFO75444 373 aaPredicted RBP15.74■□□□□ 0.11
TPM4-205ENST00000586833 DGAT1O75907 488 aa15.74■□□□□ 0.11
TPM4-205ENST00000586833 ZSCAN22P10073 491 aaPredicted RBP15.74■□□□□ 0.11
TPM4-205ENST00000586833 CRYBB1P53674 252 aaPredicted RBP15.74■□□□□ 0.11
TPM4-205ENST00000586833 SF3A1Q15459 793 aaKnown RBP15.74■□□□□ 0.11
TPM4-205ENST00000586833 TSHZ1Q6ZSZ6 1077 aa15.74■□□□□ 0.11
TPM4-205ENST00000586833 KIAA0319LQ8IZA0 1049 aa15.74■□□□□ 0.11
TPM4-205ENST00000586833 IGSF22Q8N9C0 903 aa15.74■□□□□ 0.11
TPM4-205ENST00000586833 PHOSPHO2Q8TCD6 241 aa15.74■□□□□ 0.11
TPM4-205ENST00000586833 SLC9A7Q96T83 725 aa15.74■□□□□ 0.11
TPM4-205ENST00000586833 FTHL17Q9BXU8 183 aa15.74■□□□□ 0.11
TPM4-205ENST00000586833 IFIH1Q9BYX4 1025 aaKnown RBP15.74■□□□□ 0.11
TPM4-205ENST00000586833 INO80BQ9C086 356 aaPredicted RBP15.74■□□□□ 0.11
TPM4-205ENST00000586833 NT5C3AQ9H0P0 336 aa15.74■□□□□ 0.11
TPM4-205ENST00000586833 GINS2Q9Y248 185 aa15.74■□□□□ 0.11
TPM4-205ENST00000586833 ATP6V1DQ9Y5K8 247 aa15.74■□□□□ 0.11
TPM4-205ENST00000586833 ALPK3Q96L96 1907 aa15.73■□□□□ 0.11
TPM4-205ENST00000586833 ARHGEF35A5YM69 484 aa15.73■□□□□ 0.11
TPM4-205ENST00000586833 VWA3AA6NCI4 1184 aa15.73■□□□□ 0.11
TPM4-205ENST00000586833 GPR182O15218 404 aa15.73■□□□□ 0.11
TPM4-205ENST00000586833 ASAP2O43150 1006 aa15.73■□□□□ 0.11
TPM4-205ENST00000586833 CHRNA1P02708 482 aa15.73■□□□□ 0.11
TPM4-205ENST00000586833 AMHP03971 560 aa15.73■□□□□ 0.11
TPM4-205ENST00000586833 LONP1P36776 959 aaKnown RBP15.73■□□□□ 0.11
TPM4-205ENST00000586833 TXLNAP40222 546 aa15.73■□□□□ 0.11
TPM4-205ENST00000586833 CLCN3P51790 818 aa15.73■□□□□ 0.11
TPM4-205ENST00000586833 SMAD3P84022 425 aaKnown RBP15.73■□□□□ 0.11
TPM4-205ENST00000586833 MGAT3Q09327 533 aa15.73■□□□□ 0.11
Retrieved 100 of 20,778 RNA–protein pairs in 26.8 ms