RNA–Protein interactions for RNA: ENST00000586792.5

ZNF540-204, Transcript of zinc finger protein 540, humanhuman

TSL 3 BASIC

Gene ZNF540, Length 564 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF540-204ENST00000586792 AURKAO14965 403 aa6.15□□□□□ -1.42
ZNF540-204ENST00000586792 PPP1R11O60927 126 aaPredicted RBP6.15□□□□□ -1.42
ZNF540-204ENST00000586792 NTRK1P04629 796 aa6.15□□□□□ -1.42
ZNF540-204ENST00000586792 SEPHS1P49903 392 aa6.15□□□□□ -1.42
ZNF540-204ENST00000586792 EZH2Q15910 746 aaKnown RBP6.15□□□□□ -1.42
ZNF540-204ENST00000586792 HS1BP3Q53T59 392 aa6.15□□□□□ -1.42
ZNF540-204ENST00000586792 CC2D1BQ5T0F9 858 aaKnown RBP6.15□□□□□ -1.42
ZNF540-204ENST00000586792 TAB3Q8N5C8 712 aaPredicted RBP6.15□□□□□ -1.42
ZNF540-204ENST00000586792 ZCRB1Q8TBF4 217 aaKnown RBP6.15□□□□□ -1.42
ZNF540-204ENST00000586792 NKD1Q969G9 470 aa6.15□□□□□ -1.42
ZNF540-204ENST00000586792 TMEM168Q9H0V1 697 aa6.15□□□□□ -1.42
ZNF540-204ENST00000586792 L2HGDHQ9H9P8 463 aa6.15□□□□□ -1.42
ZNF540-204ENST00000586792 UBP1Q9NZI7 540 aa6.15□□□□□ -1.42
ZNF540-204ENST00000586792 NUP188Q5SRE5 1749 aa6.15□□□□□ -1.42
ZNF540-204ENST00000586792 WASHC2AQ641Q2 1341 aa6.15□□□□□ -1.43
ZNF540-204ENST00000586792 EP400Q96L91 3159 aa6.14□□□□□ -1.43
ZNF540-204ENST00000586792 PKD1L3Q7Z443 1732 aa6.14□□□□□ -1.43
ZNF540-204ENST00000586792 SHANK3Q9BYB0 1731 aa6.14□□□□□ -1.43
ZNF540-204ENST00000586792 NPHS1O60500 1241 aa6.14□□□□□ -1.43
ZNF540-204ENST00000586792 CYP7B1O75881 506 aa6.14□□□□□ -1.43
ZNF540-204ENST00000586792 TP53P04637 393 aaPredicted RBP6.14□□□□□ -1.43
ZNF540-204ENST00000586792 NBPF6Q5VWK0 638 aa6.14□□□□□ -1.43
ZNF540-204ENST00000586792 STK32CQ86UX6 486 aa6.14□□□□□ -1.43
ZNF540-204ENST00000586792 PPFIBP1Q86W92 1011 aa6.14□□□□□ -1.43
ZNF540-204ENST00000586792 SLITRK4Q8IW52 837 aa6.14□□□□□ -1.43
ZNF540-204ENST00000586792 NBPF4Q96M43 638 aa6.14□□□□□ -1.43
ZNF540-204ENST00000586792 POLKQ9UBT6 870 aa6.14□□□□□ -1.43
ZNF540-204ENST00000586792 SIT1Q9Y3P8 196 aa6.14□□□□□ -1.43
ZNF540-204ENST00000586792 ZNF451Q9Y4E5 1061 aa6.14□□□□□ -1.43
ZNF540-204ENST00000586792 BTAF1O14981 1849 aa6.13□□□□□ -1.43
ZNF540-204ENST00000586792 NPIPB8E9PQR5 432 aa6.13□□□□□ -1.43
ZNF540-204ENST00000586792 PLSCR1O15162 318 aa6.13□□□□□ -1.43
ZNF540-204ENST00000586792 CLSTN1O94985 981 aa6.13□□□□□ -1.43
ZNF540-204ENST00000586792 IMPDH2P12268 514 aa6.13□□□□□ -1.43
ZNF540-204ENST00000586792 ZNF28P17035 718 aa6.13□□□□□ -1.43
ZNF540-204ENST00000586792 PAMP19021 973 aa6.13□□□□□ -1.43
ZNF540-204ENST00000586792 ZEB1P37275 1124 aaPredicted RBP6.13□□□□□ -1.43
ZNF540-204ENST00000586792 ABHD18Q0P651 414 aa6.13□□□□□ -1.43
ZNF540-204ENST00000586792 FOXE3Q13461 319 aa6.13□□□□□ -1.43
ZNF540-204ENST00000586792 PKN3Q6P5Z2 889 aa6.13□□□□□ -1.43
ZNF540-204ENST00000586792 FAM26EQ8N5C1 309 aa6.13□□□□□ -1.43
ZNF540-204ENST00000586792 CHFRQ96EP1 664 aa6.13□□□□□ -1.43
ZNF540-204ENST00000586792 CFAP53Q96M91 514 aa6.13□□□□□ -1.43
ZNF540-204ENST00000586792 WWC2-AS2Q96NR7 200 aa6.13□□□□□ -1.43
ZNF540-204ENST00000586792 CAMKK2Q96RR4 588 aa6.13□□□□□ -1.43
ZNF540-204ENST00000586792 SYT3Q9BQG1 590 aa6.13□□□□□ -1.43
ZNF540-204ENST00000586792 NPHP3-ACAD11A0A0J9YXS1 232 aa6.12□□□□□ -1.43
ZNF540-204ENST00000586792 FUCA1P04066 466 aa6.12□□□□□ -1.43
ZNF540-204ENST00000586792 HMGB2P26583 209 aaKnown RBP6.12□□□□□ -1.43
ZNF540-204ENST00000586792 EIF4A2Q14240 407 aaKnown RBP6.12□□□□□ -1.43
ZNF540-204ENST00000586792 PPP2R5DQ14738 602 aa6.12□□□□□ -1.43
ZNF540-204ENST00000586792 CPNE8Q86YQ8 564 aa6.12□□□□□ -1.43
ZNF540-204ENST00000586792 KBTBD2Q8IY47 623 aa6.12□□□□□ -1.43
ZNF540-204ENST00000586792 ANKRD13AQ8IZ07 590 aa6.12□□□□□ -1.43
ZNF540-204ENST00000586792 TM9SF2Q99805 663 aa6.12□□□□□ -1.43
ZNF540-204ENST00000586792 NT5C1AQ9BXI3 368 aa6.12□□□□□ -1.43
ZNF540-204ENST00000586792 PLEKHG2Q9H7P9 1386 aa6.12□□□□□ -1.43
ZNF540-204ENST00000586792 STK32BQ9NY57 414 aa6.12□□□□□ -1.43
ZNF540-204ENST00000586792 NPC1L1Q9UHC9 1359 aa6.12□□□□□ -1.43
ZNF540-204ENST00000586792 LRP5O75197 1615 aa6.11□□□□□ -1.43
ZNF540-204ENST00000586792 IGSF1Q8N6C5 1336 aa6.11□□□□□ -1.43
ZNF540-204ENST00000586792 C2orf71A6NGG8 1288 aa6.11□□□□□ -1.43
ZNF540-204ENST00000586792 KCNQ2O43526 872 aa6.11□□□□□ -1.43
ZNF540-204ENST00000586792 HSP90AB1P08238 724 aaKnown RBP6.11□□□□□ -1.43
ZNF540-204ENST00000586792 IL13P35225 146 aa6.11□□□□□ -1.43
ZNF540-204ENST00000586792 TXNRD1Q16881 649 aa6.11□□□□□ -1.43
ZNF540-204ENST00000586792 PLEKHO1Q53GL0 409 aaPredicted RBP6.11□□□□□ -1.43
ZNF540-204ENST00000586792 C1orf141Q5JVX7 400 aa6.11□□□□□ -1.43
ZNF540-204ENST00000586792 MIIPQ5JXC2 388 aa6.11□□□□□ -1.43
ZNF540-204ENST00000586792 TICAM2Q86XR7 235 aa6.11□□□□□ -1.43
ZNF540-204ENST00000586792 IFNL2Q8IZJ0 200 aa6.11□□□□□ -1.43
ZNF540-204ENST00000586792 AMER2Q8N7J2 671 aa6.11□□□□□ -1.43
ZNF540-204ENST00000586792 Q8TCH9 128 aa6.11□□□□□ -1.43
ZNF540-204ENST00000586792 SEC14L1Q92503 715 aa6.11□□□□□ -1.43
ZNF540-204ENST00000586792 MBD6Q96DN6 1003 aa6.11□□□□□ -1.43
ZNF540-204ENST00000586792 YTHDC1Q96MU7 727 aaKnown RBP6.11□□□□□ -1.43
ZNF540-204ENST00000586792 CEP89Q96ST8 783 aa6.11□□□□□ -1.43
ZNF540-204ENST00000586792 WHRNQ9P202 907 aa6.11□□□□□ -1.43
ZNF540-204ENST00000586792 BACE2Q9Y5Z0 518 aa6.11□□□□□ -1.43
ZNF540-204ENST00000586792 NCAPD2Q15021 1401 aa6.1□□□□□ -1.43
ZNF540-204ENST00000586792 STXBP3O00186 592 aa6.1□□□□□ -1.43
ZNF540-204ENST00000586792 U2SURPO15042 1029 aaKnown RBP6.1□□□□□ -1.43
ZNF540-204ENST00000586792 B4GALT4O60513 344 aa6.1□□□□□ -1.43
ZNF540-204ENST00000586792 DIAPH1O60610 1272 aaKnown RBP6.1□□□□□ -1.43
ZNF540-204ENST00000586792 MTHFSP49914 203 aa6.1□□□□□ -1.43
ZNF540-204ENST00000586792 NKX3-2P78367 333 aa6.1□□□□□ -1.43
ZNF540-204ENST00000586792 DPTQ07507 201 aa6.1□□□□□ -1.43
ZNF540-204ENST00000586792 PRKD1Q15139 912 aaPredicted RBP6.1□□□□□ -1.43
ZNF540-204ENST00000586792 AMOTQ4VCS5 1084 aa6.1□□□□□ -1.43
ZNF540-204ENST00000586792 CERS3Q8IU89 383 aa6.1□□□□□ -1.43
ZNF540-204ENST00000586792 FAM126BQ8IXS8 530 aa6.1□□□□□ -1.43
ZNF540-204ENST00000586792 TMOD3Q9NYL9 352 aa6.1□□□□□ -1.43
ZNF540-204ENST00000586792 PPP1R1BQ9UD71 204 aaPredicted RBP6.1□□□□□ -1.43
ZNF540-204ENST00000586792 ADAMTS1Q9UHI8 967 aa6.1□□□□□ -1.43
ZNF540-204ENST00000586792 LY75O60449 1722 aa6.09□□□□□ -1.43
ZNF540-204ENST00000586792 TOGARAM1Q9Y4F4 1720 aa6.09□□□□□ -1.43
ZNF540-204ENST00000586792 C7orf72A4D263 438 aa6.09□□□□□ -1.43
ZNF540-204ENST00000586792 SGSM2O43147 1006 aa6.09□□□□□ -1.43
ZNF540-204ENST00000586792 ADAM9Q13443 819 aa6.09□□□□□ -1.43
ZNF540-204ENST00000586792 SULT6B1Q6IMI4 303 aa6.09□□□□□ -1.43
Retrieved 100 of 20,778 RNA–protein pairs in 74.8 ms