RNA–Protein interactions for RNA: ENST00000586119.1

LIG3-207, Transcript of DNA ligase 3, humanhuman

TSL 3

Gene LIG3, Length 565 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG3-207ENST00000586119 M0QZ92 97 aa13.25□□□□□ -0.29
LIG3-207ENST00000586119 NCK2O43639 380 aa13.25□□□□□ -0.29
LIG3-207ENST00000586119 GLP2RO95838 553 aa13.25□□□□□ -0.29
LIG3-207ENST00000586119 ADD1P35611 737 aaKnown RBP13.25□□□□□ -0.29
LIG3-207ENST00000586119 NDUFV1P49821 464 aa13.25□□□□□ -0.29
LIG3-207ENST00000586119 ADCY7P51828 1080 aa13.25□□□□□ -0.29
LIG3-207ENST00000586119 SMAD4Q13485 552 aaKnown RBP13.25□□□□□ -0.29
LIG3-207ENST00000586119 RTN1Q16799 776 aa13.25□□□□□ -0.29
LIG3-207ENST00000586119 SWSAP1Q6NVH7 229 aa13.25□□□□□ -0.29
LIG3-207ENST00000586119 SYNE3Q6ZMZ3 975 aa13.25□□□□□ -0.29
LIG3-207ENST00000586119 P2RX5Q93086 422 aa13.25□□□□□ -0.29
LIG3-207ENST00000586119 FBXL18Q96ME1 805 aa13.25□□□□□ -0.29
LIG3-207ENST00000586119 FTHL17Q9BXU8 183 aa13.25□□□□□ -0.29
LIG3-207ENST00000586119 PPP4R2Q9NY27 417 aa13.25□□□□□ -0.29
LIG3-207ENST00000586119 BARX2Q9UMQ3 279 aaPredicted RBP13.25□□□□□ -0.29
LIG3-207ENST00000586119 FAM50BQ9Y247 325 aa13.25□□□□□ -0.29
LIG3-207ENST00000586119 SQORQ9Y6N5 450 aa13.25□□□□□ -0.29
LIG3-207ENST00000586119 KDM3AQ9Y4C1 1321 aa13.24□□□□□ -0.29
LIG3-207ENST00000586119 TBKBP1A7MCY6 615 aa13.24□□□□□ -0.29
LIG3-207ENST00000586119 BACH1O14867 736 aa13.24□□□□□ -0.29
LIG3-207ENST00000586119 ZBTB43O43298 467 aa13.24□□□□□ -0.29
LIG3-207ENST00000586119 STAG3L1P0CL83 205 aa13.24□□□□□ -0.29
LIG3-207ENST00000586119 ZNF76P36508 570 aa13.24□□□□□ -0.29
LIG3-207ENST00000586119 SREBF1P36956 1147 aa13.24□□□□□ -0.29
LIG3-207ENST00000586119 SARSP49591 514 aaKnown RBP13.24□□□□□ -0.29
LIG3-207ENST00000586119 ERVFC1P60507 584 aa13.24□□□□□ -0.29
LIG3-207ENST00000586119 DHX32Q7L7V1 743 aaKnown RBP13.24□□□□□ -0.29
LIG3-207ENST00000586119 PLA2G4DQ86XP0 818 aa13.24□□□□□ -0.29
LIG3-207ENST00000586119 NME8Q8N427 588 aa13.24□□□□□ -0.29
LIG3-207ENST00000586119 VN1R2Q8NFZ6 395 aa13.24□□□□□ -0.29
LIG3-207ENST00000586119 ZNF668Q96K58 619 aaPredicted RBP13.24□□□□□ -0.29
LIG3-207ENST00000586119 ADAM2Q99965 735 aa13.24□□□□□ -0.29
LIG3-207ENST00000586119 BARHL2Q9NY43 387 aa13.24□□□□□ -0.29
LIG3-207ENST00000586119 LRFN2Q9ULH4 789 aa13.24□□□□□ -0.29
LIG3-207ENST00000586119 ST3GAL5Q9UNP4 418 aa13.24□□□□□ -0.29
LIG3-207ENST00000586119 PCDHB7Q9Y5E2 793 aa13.24□□□□□ -0.29
LIG3-207ENST00000586119 IGLV3-22A0A075B6J6 115 aa13.23□□□□□ -0.29
LIG3-207ENST00000586119 KLF18A0A0U1RQI7 1052 aa13.23□□□□□ -0.29
LIG3-207ENST00000586119 GOLGA8AA7E2F4 631 aa13.23□□□□□ -0.29
LIG3-207ENST00000586119 GOLGA8BA8MQT2 603 aa13.23□□□□□ -0.29
LIG3-207ENST00000586119 EDIL3O43854 480 aa13.23□□□□□ -0.29
LIG3-207ENST00000586119 HBP1O60381 514 aa13.23□□□□□ -0.29
LIG3-207ENST00000586119 RPS6KA5O75582 802 aa13.23□□□□□ -0.29
LIG3-207ENST00000586119 FOSP01100 380 aaPredicted RBP13.23□□□□□ -0.29
LIG3-207ENST00000586119 VTNP04004 478 aa13.23□□□□□ -0.29
LIG3-207ENST00000586119 FGFR1P11362 822 aa13.23□□□□□ -0.29
LIG3-207ENST00000586119 APOBRQ0VD83 1088 aa13.23□□□□□ -0.29
LIG3-207ENST00000586119 KIZQ2M2Z5 673 aa13.23□□□□□ -0.29
LIG3-207ENST00000586119 SPOUT1Q5T280 376 aaKnown RBP13.23□□□□□ -0.29
LIG3-207ENST00000586119 PDXDC2PQ6P474 469 aa13.23□□□□□ -0.29
LIG3-207ENST00000586119 EFHBQ8N7U6 833 aa13.23□□□□□ -0.29
LIG3-207ENST00000586119 MICAL1Q8TDZ2 1067 aa13.23□□□□□ -0.29
LIG3-207ENST00000586119 ATP8B4Q8TF62 1192 aa13.23□□□□□ -0.29
LIG3-207ENST00000586119 CCDC136Q96JN2 1154 aa13.23□□□□□ -0.29
LIG3-207ENST00000586119 PHOX2BQ99453 314 aa13.23□□□□□ -0.29
LIG3-207ENST00000586119 OSMRQ99650 979 aa13.23□□□□□ -0.29
LIG3-207ENST00000586119 ZNF302Q9NR11 478 aa13.23□□□□□ -0.29
LIG3-207ENST00000586119 TYW1Q9NV66 732 aaKnown RBP13.23□□□□□ -0.29
LIG3-207ENST00000586119 RBM28Q9NW13 759 aaKnown RBP13.23□□□□□ -0.29
LIG3-207ENST00000586119 NAP1L2Q9ULW6 460 aaPredicted RBP13.23□□□□□ -0.29
LIG3-207ENST00000586119 MYO10Q9HD67 2058 aa13.23□□□□□ -0.29
LIG3-207ENST00000586119 WDFY4Q6ZS81 3184 aa13.23□□□□□ -0.29
LIG3-207ENST00000586119 C9IYK1 514 aa13.22□□□□□ -0.29
LIG3-207ENST00000586119 GPR32O75388 356 aa13.22□□□□□ -0.29
LIG3-207ENST00000586119 EYA4O95677 639 aa13.22□□□□□ -0.29
LIG3-207ENST00000586119 NHLH1Q02575 133 aa13.22□□□□□ -0.29
LIG3-207ENST00000586119 NAALADL2Q58DX5 795 aa13.22□□□□□ -0.29
LIG3-207ENST00000586119 HERC4Q5GLZ8 1057 aaPredicted RBP13.22□□□□□ -0.29
LIG3-207ENST00000586119 IER5LQ5T953 404 aa13.22□□□□□ -0.29
LIG3-207ENST00000586119 LRRC55Q6ZSA7 311 aa13.22□□□□□ -0.29
LIG3-207ENST00000586119 CENPQQ7L2Z9 268 aaPredicted RBP13.22□□□□□ -0.29
LIG3-207ENST00000586119 FAM228AQ86W67 206 aa13.22□□□□□ -0.29
LIG3-207ENST00000586119 RASGRP4Q8TDF6 673 aa13.22□□□□□ -0.29
LIG3-207ENST00000586119 CRYGNQ8WXF5 182 aa13.22□□□□□ -0.29
LIG3-207ENST00000586119 UPF3BQ9BZI7 483 aaKnown RBP13.22□□□□□ -0.29
LIG3-207ENST00000586119 CWH43Q9H720 699 aa13.22□□□□□ -0.29
LIG3-207ENST00000586119 TLE6Q9H808 572 aa13.22□□□□□ -0.29
LIG3-207ENST00000586119 RGS18Q9NS28 235 aa13.22□□□□□ -0.29
LIG3-207ENST00000586119 DENND3A2RUS2 1198 aa13.21□□□□□ -0.29
LIG3-207ENST00000586119 C22orf31O95567 290 aa13.21□□□□□ -0.29
LIG3-207ENST00000586119 CLCN3P51790 818 aa13.21□□□□□ -0.29
LIG3-207ENST00000586119 DSC3Q14574 896 aa13.21□□□□□ -0.29
LIG3-207ENST00000586119 PKN1Q16512 942 aa13.21□□□□□ -0.29
LIG3-207ENST00000586119 ZNF484Q5JVG2 852 aa13.21□□□□□ -0.29
LIG3-207ENST00000586119 FAM160B1Q5W0V3 765 aa13.21□□□□□ -0.29
LIG3-207ENST00000586119 PPP1R18Q6NYC8 613 aa13.21□□□□□ -0.29
LIG3-207ENST00000586119 CKAP2LQ8IYA6 745 aa13.21□□□□□ -0.29
LIG3-207ENST00000586119 SMRP1Q8NCR6 262 aa13.21□□□□□ -0.29
LIG3-207ENST00000586119 EDAQ92838 391 aa13.21□□□□□ -0.29
LIG3-207ENST00000586119 TNPO1Q92973 898 aaKnown RBP13.21□□□□□ -0.29
LIG3-207ENST00000586119 GJA10Q969M2 543 aa13.21□□□□□ -0.29
LIG3-207ENST00000586119 APOL5Q9BWW9 433 aa13.21□□□□□ -0.29
LIG3-207ENST00000586119 RNF19AQ9NV58 838 aa13.21□□□□□ -0.29
LIG3-207ENST00000586119 USP15Q9Y4E8 981 aaPredicted RBP13.21□□□□□ -0.29
LIG3-207ENST00000586119 LOC730098B7Z3J9 87 aa13.2□□□□□ -0.3
LIG3-207ENST00000586119 IPO5O00410 1097 aaKnown RBP13.2□□□□□ -0.3
LIG3-207ENST00000586119 FGF18O76093 207 aa13.2□□□□□ -0.3
LIG3-207ENST00000586119 RPLP2P05387 115 aaKnown RBP13.2□□□□□ -0.3
LIG3-207ENST00000586119 CYP3A4P08684 503 aa13.2□□□□□ -0.3
LIG3-207ENST00000586119 PBX3P40426 434 aa13.2□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 22.5 ms