RNA–Protein interactions for RNA: ENST00000586059.5

CNN1-204, Transcript of calponin 1, humanhuman

TSL 3

Gene CNN1, Length 565 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNN1-204ENST00000586059 LRWD1Q9UFC0 647 aa13.5□□□□□ -0.25
CNN1-204ENST00000586059 PCDHA2Q9Y5H9 948 aa13.5□□□□□ -0.25
CNN1-204ENST00000586059 GBF1Q92538 1859 aa13.5□□□□□ -0.25
CNN1-204ENST00000586059 SMIM35A0A1B0GVV1 85 aa13.49□□□□□ -0.25
CNN1-204ENST00000586059 RSPH10B2B2RC85 870 aa13.49□□□□□ -0.25
CNN1-204ENST00000586059 SLITRK3O94933 977 aa13.49□□□□□ -0.25
CNN1-204ENST00000586059 RSPH10BP0C881 870 aa13.49□□□□□ -0.25
CNN1-204ENST00000586059 PDIA4P13667 645 aaKnown RBP13.49□□□□□ -0.25
CNN1-204ENST00000586059 CLCN3P51790 818 aa13.49□□□□□ -0.25
CNN1-204ENST00000586059 TBC1D8BQ0IIM8 1120 aa13.49□□□□□ -0.25
CNN1-204ENST00000586059 C9orf50Q5SZB4 431 aa13.49□□□□□ -0.25
CNN1-204ENST00000586059 HAUS3Q68CZ6 603 aa13.49□□□□□ -0.25
CNN1-204ENST00000586059 PSRC1Q6PGN9 363 aaPredicted RBP13.49□□□□□ -0.25
CNN1-204ENST00000586059 TRAF7Q6Q0C0 670 aa13.49□□□□□ -0.25
CNN1-204ENST00000586059 ANO5Q75V66 913 aa13.49□□□□□ -0.25
CNN1-204ENST00000586059 TDHQ8IZJ6 230 aa13.49□□□□□ -0.25
CNN1-204ENST00000586059 METTL13Q8N6R0 699 aa13.49□□□□□ -0.25
CNN1-204ENST00000586059 CCDC43Q96MW1 224 aaKnown RBP13.49□□□□□ -0.25
CNN1-204ENST00000586059 HSD17B14Q9BPX1 270 aa13.49□□□□□ -0.25
CNN1-204ENST00000586059 NIFKQ9BYG3 293 aaKnown RBP13.49□□□□□ -0.25
CNN1-204ENST00000586059 TUFT1Q9NNX1 390 aa13.49□□□□□ -0.25
CNN1-204ENST00000586059 CLIC4Q9Y696 253 aa13.49□□□□□ -0.25
CNN1-204ENST00000586059 PTPRSQ13332 1948 aa13.49□□□□□ -0.25
CNN1-204ENST00000586059 VWA3AA6NCI4 1184 aa13.48□□□□□ -0.25
CNN1-204ENST00000586059 PP2D1A8MPX8 630 aa13.48□□□□□ -0.25
CNN1-204ENST00000586059 M0QZ92 97 aa13.48□□□□□ -0.25
CNN1-204ENST00000586059 MAGEB2O15479 319 aa13.48□□□□□ -0.25
CNN1-204ENST00000586059 MED24O75448 989 aa13.48□□□□□ -0.25
CNN1-204ENST00000586059 PARNO95453 639 aaKnown RBP13.48□□□□□ -0.25
CNN1-204ENST00000586059 F13A1P00488 732 aa13.48□□□□□ -0.25
CNN1-204ENST00000586059 RPLP2P05387 115 aaKnown RBP13.48□□□□□ -0.25
CNN1-204ENST00000586059 PFKMP08237 780 aa13.48□□□□□ -0.25
CNN1-204ENST00000586059 YWHABP31946 246 aaKnown RBP13.48□□□□□ -0.25
CNN1-204ENST00000586059 CCT6AP40227 531 aaKnown RBP13.48□□□□□ -0.25
CNN1-204ENST00000586059 NPEPPSP55786 919 aa13.48□□□□□ -0.25
CNN1-204ENST00000586059 MRPS6P82932 125 aaKnown RBP13.48□□□□□ -0.25
CNN1-204ENST00000586059 CEBPZQ03701 1054 aaKnown RBP13.48□□□□□ -0.25
CNN1-204ENST00000586059 TMEM62Q0P6H9 643 aa13.48□□□□□ -0.25
CNN1-204ENST00000586059 MBTPS1Q14703 1052 aa13.48□□□□□ -0.25
CNN1-204ENST00000586059 SHHQ15465 462 aa13.48□□□□□ -0.25
CNN1-204ENST00000586059 TARBP2Q15633 366 aaKnown RBP13.48□□□□□ -0.25
CNN1-204ENST00000586059 IL17AQ16552 155 aa13.48□□□□□ -0.25
CNN1-204ENST00000586059 XKR9Q5GH70 373 aa13.48□□□□□ -0.25
CNN1-204ENST00000586059 TMEM240Q5SV17 173 aa13.48□□□□□ -0.25
CNN1-204ENST00000586059 ARL6IP4Q66PJ3 421 aaKnown RBP13.48□□□□□ -0.25
CNN1-204ENST00000586059 POTEGQ6S5H5 508 aa13.48□□□□□ -0.25
CNN1-204ENST00000586059 ZNF365Q70YC5 407 aa13.48□□□□□ -0.25
CNN1-204ENST00000586059 OTUD6AQ7L8S5 288 aa13.48□□□□□ -0.25
CNN1-204ENST00000586059 RPAINQ86UA6 219 aa13.48□□□□□ -0.25
CNN1-204ENST00000586059 RPUSD2Q8IZ73 545 aaKnown RBP13.48□□□□□ -0.25
CNN1-204ENST00000586059 LRRC71Q8N4P6 559 aa13.48□□□□□ -0.25
CNN1-204ENST00000586059 IGSF22Q8N9C0 903 aa13.48□□□□□ -0.25
CNN1-204ENST00000586059 SNX29Q8TEQ0 813 aa13.48□□□□□ -0.25
CNN1-204ENST00000586059 CEP170P1Q96L14 293 aa13.48□□□□□ -0.25
CNN1-204ENST00000586059 BUD13Q9BRD0 619 aaKnown RBP eCLIP13.48□□□□□ -0.25
CNN1-204ENST00000586059 POLR3CQ9BUI4 534 aaPredicted RBP13.48□□□□□ -0.25
CNN1-204ENST00000586059 CYP26B1Q9NR63 512 aa13.48□□□□□ -0.25
CNN1-204ENST00000586059 CDY2AQ9Y6F7 541 aa13.48□□□□□ -0.25
CNN1-204ENST00000586059 MYH11P35749 1972 aa13.48□□□□□ -0.25
CNN1-204ENST00000586059 LAMA2P24043 3122 aaKnown RBP13.47□□□□□ -0.25
CNN1-204ENST00000586059 A0A1W2PPC1 479 aa13.47□□□□□ -0.25
CNN1-204ENST00000586059 RBAK-RBAKDNI3L0D1 243 aa13.47□□□□□ -0.25
CNN1-204ENST00000586059 ZBTB39O15060 712 aa13.47□□□□□ -0.25
CNN1-204ENST00000586059 NBNO60934 754 aa13.47□□□□□ -0.25
CNN1-204ENST00000586059 LYPLA2O95372 231 aa13.47□□□□□ -0.25
CNN1-204ENST00000586059 SPATA31C1P0DKV0 1188 aa13.47□□□□□ -0.25
CNN1-204ENST00000586059 RPA1P27694 616 aa13.47□□□□□ -0.25
CNN1-204ENST00000586059 TMOD1P28289 359 aa13.47□□□□□ -0.25
CNN1-204ENST00000586059 MGAT3Q09327 533 aa13.47□□□□□ -0.25
CNN1-204ENST00000586059 PDIA5Q14554 519 aa13.47□□□□□ -0.25
CNN1-204ENST00000586059 FOXD4L6Q3SYB3 417 aaPredicted RBP13.47□□□□□ -0.25
CNN1-204ENST00000586059 FAM26DQ5JW98 314 aa13.47□□□□□ -0.25
CNN1-204ENST00000586059 EFCAB12Q6NXP0 572 aa13.47□□□□□ -0.25
CNN1-204ENST00000586059 FOXD4L3Q6VB84 417 aaPredicted RBP13.47□□□□□ -0.25
CNN1-204ENST00000586059 C16orf59Q7L2K0 433 aa13.47□□□□□ -0.25
CNN1-204ENST00000586059 CATSPER3Q86XQ3 398 aa13.47□□□□□ -0.25
CNN1-204ENST00000586059 KIAA0319LQ8IZA0 1049 aa13.47□□□□□ -0.25
CNN1-204ENST00000586059 PIGOQ8TEQ8 1089 aa13.47□□□□□ -0.25
CNN1-204ENST00000586059 VWCEQ96DN2 955 aa13.47□□□□□ -0.25
CNN1-204ENST00000586059 RNPC3Q96LT9 517 aaKnown RBP13.47□□□□□ -0.25
CNN1-204ENST00000586059 USP28Q96RU2 1077 aa13.47□□□□□ -0.25
CNN1-204ENST00000586059 CEP89Q96ST8 783 aa13.47□□□□□ -0.25
CNN1-204ENST00000586059 MAP7D2Q96T17 732 aa13.47□□□□□ -0.25
CNN1-204ENST00000586059 PPP1R16BQ96T49 567 aa13.47□□□□□ -0.25
CNN1-204ENST00000586059 SUGCTQ9HAC7 445 aa13.47□□□□□ -0.25
CNN1-204ENST00000586059 BMP2KQ9NSY1 1161 aaPredicted RBP13.47□□□□□ -0.25
CNN1-204ENST00000586059 AKT3Q9Y243 479 aa13.47□□□□□ -0.25
CNN1-204ENST00000586059 TRPV2Q9Y5S1 764 aa13.47□□□□□ -0.25
CNN1-204ENST00000586059 A0A087WWV3 80 aa13.46□□□□□ -0.25
CNN1-204ENST00000586059 FGBP02675 491 aa13.46□□□□□ -0.25
CNN1-204ENST00000586059 CHRNA1P02708 482 aa13.46□□□□□ -0.25
CNN1-204ENST00000586059 CXCL10P02778 98 aa13.46□□□□□ -0.25
CNN1-204ENST00000586059 VTNP04004 478 aa13.46□□□□□ -0.25
CNN1-204ENST00000586059 GHRP10912 638 aa13.46□□□□□ -0.25
CNN1-204ENST00000586059 MARCKSP29966 332 aaPredicted RBP13.46□□□□□ -0.25
CNN1-204ENST00000586059 POLGP54098 1239 aaPredicted RBP13.46□□□□□ -0.25
CNN1-204ENST00000586059 GPNMBQ14956 572 aa13.46□□□□□ -0.25
CNN1-204ENST00000586059 PTPAQ15257 358 aa13.46□□□□□ -0.25
CNN1-204ENST00000586059 IER5Q5VY09 327 aa13.46□□□□□ -0.25
CNN1-204ENST00000586059 KRT79Q5XKE5 535 aa13.46□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms