RNA–Protein interactions for RNA: ENST00000586058.1

LIG3-206, Transcript of DNA ligase 3, humanhuman

TSL 2

Gene LIG3, Length 581 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG3-206ENST00000586058 SPATA31C1P0DKV0 1188 aa6.85□□□□□ -1.31
LIG3-206ENST00000586058 TXNP10599 105 aaKnown RBP6.85□□□□□ -1.31
LIG3-206ENST00000586058 KCNA2P16389 499 aa6.85□□□□□ -1.31
LIG3-206ENST00000586058 CYP11B2P19099 503 aa6.85□□□□□ -1.31
LIG3-206ENST00000586058 UBA1P22314 1058 aaKnown RBP6.85□□□□□ -1.31
LIG3-206ENST00000586058 EDNRBP24530 442 aa6.85□□□□□ -1.31
LIG3-206ENST00000586058 MSNP26038 577 aaKnown RBP6.85□□□□□ -1.31
LIG3-206ENST00000586058 CASP1P29466 404 aa6.85□□□□□ -1.31
LIG3-206ENST00000586058 CDC25BP30305 580 aa6.85□□□□□ -1.31
LIG3-206ENST00000586058 SLC26A2P50443 739 aa6.85□□□□□ -1.31
LIG3-206ENST00000586058 SMTNP53814 917 aa6.85□□□□□ -1.31
LIG3-206ENST00000586058 POLGP54098 1239 aaPredicted RBP6.85□□□□□ -1.31
LIG3-206ENST00000586058 SLC12A3P55017 1021 aa6.85□□□□□ -1.31
LIG3-206ENST00000586058 FCGRTP55899 365 aa6.85□□□□□ -1.31
LIG3-206ENST00000586058 ACTR2P61160 394 aa6.85□□□□□ -1.31
LIG3-206ENST00000586058 PRKCEQ02156 737 aa6.85□□□□□ -1.31
LIG3-206ENST00000586058 RAD51AP2Q09MP3 1159 aa6.85□□□□□ -1.31
LIG3-206ENST00000586058 GRB14Q14449 540 aa6.85□□□□□ -1.31
LIG3-206ENST00000586058 IQCB1Q15051 598 aa6.85□□□□□ -1.31
LIG3-206ENST00000586058 ARHGEF6Q15052 776 aa6.85□□□□□ -1.31
LIG3-206ENST00000586058 DEFB115Q30KQ5 88 aa6.85□□□□□ -1.31
LIG3-206ENST00000586058 Q3C1V9 767 aa6.85□□□□□ -1.31
LIG3-206ENST00000586058 COBLL1Q53SF7 1204 aa6.85□□□□□ -1.31
LIG3-206ENST00000586058 XKR9Q5GH70 373 aa6.85□□□□□ -1.31
LIG3-206ENST00000586058 METTL7BQ6UX53 244 aa6.85□□□□□ -1.31
LIG3-206ENST00000586058 CYFIP1Q7L576 1253 aa6.85□□□□□ -1.31
LIG3-206ENST00000586058 EEPD1Q7L9B9 569 aa6.85□□□□□ -1.31
LIG3-206ENST00000586058 CREBRFQ8IUR6 639 aa6.85□□□□□ -1.31
LIG3-206ENST00000586058 FBXO16Q8IX29 292 aaPredicted RBP6.85□□□□□ -1.31
LIG3-206ENST00000586058 FAM178BQ8IXR5 827 aa6.85□□□□□ -1.31
LIG3-206ENST00000586058 TRMT44Q8IYL2 757 aaKnown RBP6.85□□□□□ -1.31
LIG3-206ENST00000586058 GUF1Q8N442 669 aaKnown RBP6.85□□□□□ -1.31
LIG3-206ENST00000586058 MYCT1Q8N699 235 aa6.85□□□□□ -1.31
LIG3-206ENST00000586058 CSGALNACT2Q8N6G5 542 aa6.85□□□□□ -1.31
LIG3-206ENST00000586058 PIGOQ8TEQ8 1089 aa6.85□□□□□ -1.31
LIG3-206ENST00000586058 SLC7A3Q8WY07 619 aa6.85□□□□□ -1.31
LIG3-206ENST00000586058 GLG1Q92896 1179 aa6.85□□□□□ -1.31
LIG3-206ENST00000586058 P2RX5Q93086 422 aa6.85□□□□□ -1.31
LIG3-206ENST00000586058 MRFAP1L1Q96HT8 127 aa6.85□□□□□ -1.31
LIG3-206ENST00000586058 PURBQ96QR8 312 aaKnown RBP6.85□□□□□ -1.31
LIG3-206ENST00000586058 APBA2Q99767 749 aa6.85□□□□□ -1.31
LIG3-206ENST00000586058 HSD17B14Q9BPX1 270 aa6.85□□□□□ -1.31
LIG3-206ENST00000586058 JPH2Q9BR39 696 aaPredicted RBP6.85□□□□□ -1.31
LIG3-206ENST00000586058 REEP2Q9BRK0 252 aa6.85□□□□□ -1.31
LIG3-206ENST00000586058 ABHD16BQ9H3Z7 469 aa6.85□□□□□ -1.31
LIG3-206ENST00000586058 ATP6V0A4Q9HBG4 840 aa6.85□□□□□ -1.31
LIG3-206ENST00000586058 PARVGQ9HBI0 331 aa6.85□□□□□ -1.31
LIG3-206ENST00000586058 SLC39A2Q9NP94 309 aa6.85□□□□□ -1.31
LIG3-206ENST00000586058 ANKEF1Q9NU02 776 aa6.85□□□□□ -1.31
LIG3-206ENST00000586058 ZHX1Q9UKY1 873 aaPredicted RBP6.85□□□□□ -1.31
LIG3-206ENST00000586058 GDAQ9Y2T3 454 aa6.85□□□□□ -1.31
LIG3-206ENST00000586058 PPME1Q9Y570 386 aa6.85□□□□□ -1.31
LIG3-206ENST00000586058 PHLPP2Q6ZVD8 1323 aa6.84□□□□□ -1.31
LIG3-206ENST00000586058 EMSYQ7Z589 1322 aa6.84□□□□□ -1.31
LIG3-206ENST00000586058 RALGAPA2Q2PPJ7 1873 aa6.84□□□□□ -1.31
LIG3-206ENST00000586058 A0A087WWV3 80 aa6.84□□□□□ -1.31
LIG3-206ENST00000586058 IGF2BP3O00425 579 aaKnown RBP eCLIP6.84□□□□□ -1.31
LIG3-206ENST00000586058 EIF3DO15371 548 aaKnown RBP eCLIP6.84□□□□□ -1.31
LIG3-206ENST00000586058 DHX15O43143 795 aaKnown RBP6.84□□□□□ -1.31
LIG3-206ENST00000586058 CA12O43570 354 aa6.84□□□□□ -1.31
LIG3-206ENST00000586058 GAS2O43903 313 aaKnown RBP6.84□□□□□ -1.31
LIG3-206ENST00000586058 KLRC4O43908 158 aa6.84□□□□□ -1.31
LIG3-206ENST00000586058 PEX10O60683 326 aa6.84□□□□□ -1.31
LIG3-206ENST00000586058 DGAT1O75907 488 aa6.84□□□□□ -1.31
LIG3-206ENST00000586058 SLITRK3O94933 977 aa6.84□□□□□ -1.31
LIG3-206ENST00000586058 GCNT3O95395 438 aa6.84□□□□□ -1.31
LIG3-206ENST00000586058 GNA14O95837 355 aa6.84□□□□□ -1.31
LIG3-206ENST00000586058 OATP04181 439 aa6.84□□□□□ -1.31
LIG3-206ENST00000586058 NUDT7P0C024 238 aa6.84□□□□□ -1.31
LIG3-206ENST00000586058 SCP2P22307 547 aa6.84□□□□□ -1.31
LIG3-206ENST00000586058 CCNE1P24864 410 aa6.84□□□□□ -1.31
LIG3-206ENST00000586058 GUCY2CP25092 1073 aa6.84□□□□□ -1.31
LIG3-206ENST00000586058 RPL13P26373 211 aaKnown RBP6.84□□□□□ -1.31
LIG3-206ENST00000586058 EEF1GP26641 437 aaKnown RBP6.84□□□□□ -1.31
LIG3-206ENST00000586058 TCF7P36402 384 aaPredicted RBP6.84□□□□□ -1.31
LIG3-206ENST00000586058 PRCPP42785 496 aa6.84□□□□□ -1.31
LIG3-206ENST00000586058 APLP1P51693 650 aa6.84□□□□□ -1.31
LIG3-206ENST00000586058 STX17P56962 302 aa6.84□□□□□ -1.31
LIG3-206ENST00000586058 UBASH3AP57075 661 aa6.84□□□□□ -1.31
LIG3-206ENST00000586058 MAP2K5Q13163 448 aa6.84□□□□□ -1.31
LIG3-206ENST00000586058 DMP1Q13316 513 aaPredicted RBP6.84□□□□□ -1.31
LIG3-206ENST00000586058 IRF5Q13568 498 aa6.84□□□□□ -1.31
LIG3-206ENST00000586058 PPP2R5AQ15172 486 aa6.84□□□□□ -1.31
LIG3-206ENST00000586058 ZNF792Q3KQV3 632 aa6.84□□□□□ -1.31
LIG3-206ENST00000586058 CCDC40Q4G0X9 1142 aa6.84□□□□□ -1.31
LIG3-206ENST00000586058 XKR3Q5GH77 459 aa6.84□□□□□ -1.31
LIG3-206ENST00000586058 ODR4Q5SWX8 454 aa6.84□□□□□ -1.31
LIG3-206ENST00000586058 RINT1Q6NUQ1 792 aa6.84□□□□□ -1.31
LIG3-206ENST00000586058 SWSAP1Q6NVH7 229 aa6.84□□□□□ -1.31
LIG3-206ENST00000586058 PADI6Q6TGC4 694 aa6.84□□□□□ -1.31
LIG3-206ENST00000586058 HS2ST1Q7LGA3 356 aa6.84□□□□□ -1.31
LIG3-206ENST00000586058 KCNK18Q7Z418 384 aa6.84□□□□□ -1.31
LIG3-206ENST00000586058 SFR1Q86XK3 245 aa6.84□□□□□ -1.31
LIG3-206ENST00000586058 SMYD4Q8IYR2 804 aaPredicted RBP6.84□□□□□ -1.31
LIG3-206ENST00000586058 SYCP3Q8IZU3 236 aa6.84□□□□□ -1.31
LIG3-206ENST00000586058 ADSSL1Q8N142 457 aa6.84□□□□□ -1.31
LIG3-206ENST00000586058 GOLGA5Q8TBA6 731 aa6.84□□□□□ -1.31
LIG3-206ENST00000586058 MORC4Q8TE76 937 aa6.84□□□□□ -1.31
LIG3-206ENST00000586058 SEPT1Q8WYJ6 367 aa6.84□□□□□ -1.31
LIG3-206ENST00000586058 KIFAP3Q92845 792 aa6.84□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 61.2 ms