RNA–Protein interactions for RNA: ENST00000584655.5

RFFL-212, Transcript of ring finger and FYVE like domain containing E3 ubiquitin protein ligase, humanhuman

TSL 2 BASIC

Gene RFFL, Length 4,039 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFFL-212ENST00000584655 PITPNM2Q9BZ72 1349 aa11.28□□□□□ -0.6
RFFL-212ENST00000584655 PIK3R2O00459 728 aa11.28□□□□□ -0.6
RFFL-212ENST00000584655 CTNND1O60716 968 aaKnown RBP11.28□□□□□ -0.6
RFFL-212ENST00000584655 ICAM1P05362 532 aa11.28□□□□□ -0.6
RFFL-212ENST00000584655 CYP3A4P08684 503 aa11.28□□□□□ -0.6
RFFL-212ENST00000584655 FGFR4P22455 802 aa11.28□□□□□ -0.6
RFFL-212ENST00000584655 DNM2P50570 870 aa11.28□□□□□ -0.6
RFFL-212ENST00000584655 POLGP54098 1239 aaPredicted RBP11.28□□□□□ -0.6
RFFL-212ENST00000584655 CYP26C1Q6V0L0 522 aa11.28□□□□□ -0.6
RFFL-212ENST00000584655 PASD1Q8IV76 773 aa11.28□□□□□ -0.6
RFFL-212ENST00000584655 C7orf25Q9BPX7 421 aa11.28□□□□□ -0.6
RFFL-212ENST00000584655 MXRA8Q9BRK3 442 aa11.28□□□□□ -0.6
RFFL-212ENST00000584655 PDCD2LQ9BRP1 358 aa11.28□□□□□ -0.6
RFFL-212ENST00000584655 LRP5O75197 1615 aa11.28□□□□□ -0.6
RFFL-212ENST00000584655 UBR3Q6ZT12 1888 aa11.28□□□□□ -0.6
RFFL-212ENST00000584655 COL5A3P25940 1745 aaPredicted RBP11.28□□□□□ -0.6
RFFL-212ENST00000584655 CCNE2O96020 404 aa11.27□□□□□ -0.6
RFFL-212ENST00000584655 TNNI1P19237 187 aa11.27□□□□□ -0.6
RFFL-212ENST00000584655 EHHADHQ08426 723 aa11.27□□□□□ -0.6
RFFL-212ENST00000584655 KIF5AQ12840 1032 aa11.27□□□□□ -0.6
RFFL-212ENST00000584655 APTXQ7Z2E3 356 aaKnown RBP11.27□□□□□ -0.6
RFFL-212ENST00000584655 THNSL1Q8IYQ7 743 aa11.27□□□□□ -0.6
RFFL-212ENST00000584655 GMCL1P1Q8NEA9 526 aa11.27□□□□□ -0.6
RFFL-212ENST00000584655 OPTNQ96CV9 577 aa11.27□□□□□ -0.6
RFFL-212ENST00000584655 CDCA5Q96FF9 252 aa11.27□□□□□ -0.6
RFFL-212ENST00000584655 FAM213AQ9BRX8 229 aa11.27□□□□□ -0.6
RFFL-212ENST00000584655 EHMT1Q9H9B1 1298 aa11.27□□□□□ -0.6
RFFL-212ENST00000584655 ZCCHC17Q9NP64 241 aaKnown RBP11.27□□□□□ -0.6
RFFL-212ENST00000584655 THSD7AQ9UPZ6 1657 aa11.27□□□□□ -0.6
RFFL-212ENST00000584655 ZNF536O15090 1300 aa11.27□□□□□ -0.6
RFFL-212ENST00000584655 ESYT2A0FGR8 921 aa11.27□□□□□ -0.61
RFFL-212ENST00000584655 EPB41P11171 864 aaKnown RBP11.27□□□□□ -0.61
RFFL-212ENST00000584655 GCFC2P16383 781 aaKnown RBP11.27□□□□□ -0.61
RFFL-212ENST00000584655 EPHX2P34913 555 aa11.27□□□□□ -0.61
RFFL-212ENST00000584655 COPB2P35606 906 aa11.27□□□□□ -0.61
RFFL-212ENST00000584655 PRPHP41219 470 aa11.27□□□□□ -0.61
RFFL-212ENST00000584655 DRP2Q13474 957 aa11.27□□□□□ -0.61
RFFL-212ENST00000584655 KIAA0753Q2KHM9 967 aa11.27□□□□□ -0.61
RFFL-212ENST00000584655 CCDC181Q5TID7 509 aa11.27□□□□□ -0.61
RFFL-212ENST00000584655 DHTKD1Q96HY7 919 aaPredicted RBP11.27□□□□□ -0.61
RFFL-212ENST00000584655 BPIFA3Q9BQP9 254 aa11.27□□□□□ -0.61
RFFL-212ENST00000584655 TXNRD2Q9NNW7 524 aa11.27□□□□□ -0.61
RFFL-212ENST00000584655 STK17AQ9UEE5 414 aa11.27□□□□□ -0.61
RFFL-212ENST00000584655 ESYT3A0FGR9 886 aa11.27□□□□□ -0.61
RFFL-212ENST00000584655 DENND3A2RUS2 1198 aa11.27□□□□□ -0.61
RFFL-212ENST00000584655 KRT19P08727 400 aa11.27□□□□□ -0.61
RFFL-212ENST00000584655 RPA1P27694 616 aa11.27□□□□□ -0.61
RFFL-212ENST00000584655 NUMBP49757 651 aa11.27□□□□□ -0.61
RFFL-212ENST00000584655 AP3B2Q13367 1082 aa11.27□□□□□ -0.61
RFFL-212ENST00000584655 CT47A1Q5JQC4 288 aaPredicted RBP11.27□□□□□ -0.61
RFFL-212ENST00000584655 NT5DC1Q5TFE4 455 aa11.27□□□□□ -0.61
RFFL-212ENST00000584655 SPATA20Q8TB22 786 aa11.27□□□□□ -0.61
RFFL-212ENST00000584655 PYM1Q9BRP8 204 aaKnown RBP11.27□□□□□ -0.61
RFFL-212ENST00000584655 BTBD7Q9P203 1132 aa11.27□□□□□ -0.61
RFFL-212ENST00000584655 FRMD4BQ9Y2L6 1034 aa11.27□□□□□ -0.61
RFFL-212ENST00000584655 HTTP42858 3142 aa11.27□□□□□ -0.61
RFFL-212ENST00000584655 ATP1A1P05023 1023 aaKnown RBP11.26□□□□□ -0.61
RFFL-212ENST00000584655 CD58P19256 250 aa11.26□□□□□ -0.61
RFFL-212ENST00000584655 CNGA1P29973 690 aa11.26□□□□□ -0.61
RFFL-212ENST00000584655 CDC25BP30305 580 aa11.26□□□□□ -0.61
RFFL-212ENST00000584655 CLK2P49760 499 aaKnown RBP11.26□□□□□ -0.61
RFFL-212ENST00000584655 EXOC3L4Q17RC7 722 aa11.26□□□□□ -0.61
RFFL-212ENST00000584655 FAM160B2Q86V87 743 aa11.26□□□□□ -0.61
RFFL-212ENST00000584655 CBWD2Q8IUF1 395 aa11.26□□□□□ -0.61
RFFL-212ENST00000584655 FAM114A1Q8IWE2 563 aa11.26□□□□□ -0.61
RFFL-212ENST00000584655 KLHL7Q8IXQ5 586 aa11.26□□□□□ -0.61
RFFL-212ENST00000584655 KLRG1Q96E93 195 aa11.26□□□□□ -0.61
RFFL-212ENST00000584655 KCNMB3Q9NPA1 279 aa11.26□□□□□ -0.61
RFFL-212ENST00000584655 FAM237AA0A1B0GTK4 181 aa11.26□□□□□ -0.61
RFFL-212ENST00000584655 INO80B-WBP1J3KQ70 363 aa11.26□□□□□ -0.61
RFFL-212ENST00000584655 PGM5Q15124 567 aa11.26□□□□□ -0.61
RFFL-212ENST00000584655 KNOP1Q1ED39 458 aaKnown RBP11.26□□□□□ -0.61
RFFL-212ENST00000584655 FBXO38Q6PIJ6 1188 aa11.26□□□□□ -0.61
RFFL-212ENST00000584655 DHX38Q92620 1227 aaKnown RBP11.26□□□□□ -0.61
RFFL-212ENST00000584655 INO80BQ9C086 356 aaPredicted RBP11.26□□□□□ -0.61
RFFL-212ENST00000584655 PORCNQ9H237 461 aa11.26□□□□□ -0.61
RFFL-212ENST00000584655 CTAGE9A4FU28 777 aa11.26□□□□□ -0.61
RFFL-212ENST00000584655 WDR46O15213 610 aaKnown RBP11.26□□□□□ -0.61
RFFL-212ENST00000584655 STX10O60499 249 aa11.26□□□□□ -0.61
RFFL-212ENST00000584655 USP2O75604 605 aaPredicted RBP11.26□□□□□ -0.61
RFFL-212ENST00000584655 GGPS1O95749 300 aa11.26□□□□□ -0.61
RFFL-212ENST00000584655 C2orf54Q08AI8 447 aa11.26□□□□□ -0.61
RFFL-212ENST00000584655 PDIA5Q14554 519 aa11.26□□□□□ -0.61
RFFL-212ENST00000584655 DAB2IPQ5VWQ8 1189 aa11.26□□□□□ -0.61
RFFL-212ENST00000584655 NFRKBQ6P4R8 1299 aa11.26□□□□□ -0.61
RFFL-212ENST00000584655 CCDC60Q8IWA6 550 aaPredicted RBP11.26□□□□□ -0.61
RFFL-212ENST00000584655 AS3MTQ9HBK9 375 aa11.26□□□□□ -0.61
RFFL-212ENST00000584655 KIAA0100Q14667 2235 aaKnown RBP11.26□□□□□ -0.61
RFFL-212ENST00000584655 KIF20AO95235 890 aa11.25□□□□□ -0.61
RFFL-212ENST00000584655 QARSP47897 775 aaKnown RBP11.25□□□□□ -0.61
RFFL-212ENST00000584655 SLC12A3P55017 1021 aa11.25□□□□□ -0.61
RFFL-212ENST00000584655 SP2Q02086 613 aa11.25□□□□□ -0.61
RFFL-212ENST00000584655 LLGL2Q6P1M3 1020 aa11.25□□□□□ -0.61
RFFL-212ENST00000584655 FAM83AQ86UY5 434 aa11.25□□□□□ -0.61
RFFL-212ENST00000584655 TTC16Q8NEE8 873 aa11.25□□□□□ -0.61
RFFL-212ENST00000584655 CLEC4DQ8WXI8 215 aa11.25□□□□□ -0.61
RFFL-212ENST00000584655 IFT81Q8WYA0 676 aa11.25□□□□□ -0.61
RFFL-212ENST00000584655 NACC1Q96RE7 527 aa11.25□□□□□ -0.61
RFFL-212ENST00000584655 CCDC94Q9BW85 323 aaPredicted RBP11.25□□□□□ -0.61
RFFL-212ENST00000584655 TEX13BQ9BXU2 312 aa11.25□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 26.6 ms