RNA–Protein interactions for RNA: ENST00000583908.1

NARF-222, Transcript of nuclear prelamin A recognition factor, human

TSL 3

Gene NARF, Length 430 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
NARF-222	ENST00000583908	FXR2	P51116	673 aa	Known RBP eCLIP	11.08	□□□□□ -0.64	7e-7	■□□□□ 8.7
NARF-222	ENST00000583908	POLG	P54098	1239 aa	Predicted RBP	11.08	□□□□□ -0.64
NARF-222	ENST00000583908	PTGDR	Q13258	359 aa		11.08	□□□□□ -0.64
NARF-222	ENST00000583908	IKBKE	Q14164	716 aa		11.08	□□□□□ -0.64
NARF-222	ENST00000583908	SHH	Q15465	462 aa		11.08	□□□□□ -0.64
NARF-222	ENST00000583908	TRIM71	Q2Q1W2	868 aa	Known RBP	11.08	□□□□□ -0.64
NARF-222	ENST00000583908	MTERF2	Q49AM1	385 aa		11.08	□□□□□ -0.64
NARF-222	ENST00000583908	FAM26D	Q5JW98	314 aa		11.08	□□□□□ -0.64
NARF-222	ENST00000583908	TMEM240	Q5SV17	173 aa		11.08	□□□□□ -0.64
NARF-222	ENST00000583908	OTOP2	Q7RTS6	562 aa		11.08	□□□□□ -0.64
NARF-222	ENST00000583908	DNAJB3	Q8WWF6	145 aa		11.08	□□□□□ -0.64
NARF-222	ENST00000583908	CEP170P1	Q96L14	293 aa		11.08	□□□□□ -0.64
NARF-222	ENST00000583908	CTAGE1	Q96RT6	745 aa		11.08	□□□□□ -0.64
NARF-222	ENST00000583908	EIF2AK1	Q9BQI3	630 aa	Known RBP	11.08	□□□□□ -0.64
NARF-222	ENST00000583908	NIFK	Q9BYG3	293 aa	Known RBP	11.08	□□□□□ -0.64
NARF-222	ENST00000583908	AKT3	Q9Y243	479 aa		11.08	□□□□□ -0.64
NARF-222	ENST00000583908	SLC4A7	Q9Y6M7	1214 aa		11.08	□□□□□ -0.64
NARF-222	ENST00000583908	SQOR	Q9Y6N5	450 aa		11.08	□□□□□ -0.64
NARF-222	ENST00000583908	KDM3A	Q9Y4C1	1321 aa		11.08	□□□□□ -0.64
NARF-222	ENST00000583908	MYH9	P35579	1960 aa	Known RBP	11.07	□□□□□ -0.64
NARF-222	ENST00000583908	HSFX4	A0A1B0GTS1	333 aa	Predicted RBP	11.07	□□□□□ -0.64
NARF-222	ENST00000583908	HSFX3	A0A1B0GWH4	333 aa	Predicted RBP	11.07	□□□□□ -0.64
NARF-222	ENST00000583908	ZNF862	O60290	1169 aa		11.07	□□□□□ -0.64
NARF-222	ENST00000583908	C22orf31	O95567	290 aa		11.07	□□□□□ -0.64
NARF-222	ENST00000583908	AMH	P03971	560 aa		11.07	□□□□□ -0.64
NARF-222	ENST00000583908	ACR	P10323	421 aa		11.07	□□□□□ -0.64
NARF-222	ENST00000583908	SYT1	P21579	422 aa		11.07	□□□□□ -0.64
NARF-222	ENST00000583908	TEC	P42680	631 aa		11.07	□□□□□ -0.64
NARF-222	ENST00000583908	SMAD3	P84022	425 aa	Known RBP	11.07	□□□□□ -0.64
NARF-222	ENST00000583908	CYP4A11	Q02928	519 aa		11.07	□□□□□ -0.64
NARF-222	ENST00000583908	SPIRE1	Q08AE8	756 aa		11.07	□□□□□ -0.64
NARF-222	ENST00000583908	RAB30	Q15771	203 aa		11.07	□□□□□ -0.64
NARF-222	ENST00000583908	UGCG	Q16739	394 aa		11.07	□□□□□ -0.64
NARF-222	ENST00000583908	MARCH8	Q5T0T0	291 aa		11.07	□□□□□ -0.64
NARF-222	ENST00000583908	KRT79	Q5XKE5	535 aa		11.07	□□□□□ -0.64
NARF-222	ENST00000583908	ARL6IP4	Q66PJ3	421 aa	Known RBP	11.07	□□□□□ -0.64
NARF-222	ENST00000583908	GPR153	Q6NV75	609 aa		11.07	□□□□□ -0.64
NARF-222	ENST00000583908	RUFY4	Q6ZNE9	571 aa		11.07	□□□□□ -0.64
NARF-222	ENST00000583908	TSHZ1	Q6ZSZ6	1077 aa		11.07	□□□□□ -0.64
NARF-222	ENST00000583908	TPH2	Q8IWU9	490 aa		11.07	□□□□□ -0.64
NARF-222	ENST00000583908	PHOSPHO2	Q8TCD6	241 aa		11.07	□□□□□ -0.64
NARF-222	ENST00000583908	TRAPPC12	Q8WVT3	735 aa		11.07	□□□□□ -0.64
NARF-222	ENST00000583908	TCP11	Q8WWU5	503 aa		11.07	□□□□□ -0.64
NARF-222	ENST00000583908	DYDC2	Q96IM9	177 aa		11.07	□□□□□ -0.64
NARF-222	ENST00000583908	FTHL17	Q9BXU8	183 aa		11.07	□□□□□ -0.64
NARF-222	ENST00000583908	IFIH1	Q9BYX4	1025 aa	Known RBP	11.07	□□□□□ -0.64
NARF-222	ENST00000583908	CYP26B1	Q9NR63	512 aa		11.07	□□□□□ -0.64
NARF-222	ENST00000583908	EIF4ENIF1	Q9NRA8	985 aa	Known RBP	11.07	□□□□□ -0.64
NARF-222	ENST00000583908	LRWD1	Q9UFC0	647 aa		11.07	□□□□□ -0.64
NARF-222	ENST00000583908	PCDHB6	Q9Y5E3	794 aa		11.07	□□□□□ -0.64
NARF-222	ENST00000583908	CDY2A	Q9Y6F7	541 aa		11.07	□□□□□ -0.64
NARF-222	ENST00000583908	TMEM265	A0A087WTH1	108 aa		11.06	□□□□□ -0.64
NARF-222	ENST00000583908	POTEM	A6NI47	508 aa		11.06	□□□□□ -0.64
NARF-222	ENST00000583908	EML1	O00423	815 aa		11.06	□□□□□ -0.64
NARF-222	ENST00000583908	LYPLA2	O95372	231 aa		11.06	□□□□□ -0.64
NARF-222	ENST00000583908	XRCC6	P12956	609 aa	Known RBP eCLIP	11.06	□□□□□ -0.64	8e-11	■■□□□ 11.5
NARF-222	ENST00000583908	ATP2A2	P16615	1042 aa	Known RBP	11.06	□□□□□ -0.64
NARF-222	ENST00000583908	ATP4A	P20648	1035 aa		11.06	□□□□□ -0.64
NARF-222	ENST00000583908	EPHB4	P54760	987 aa		11.06	□□□□□ -0.64
NARF-222	ENST00000583908	ATP2C1	P98194	919 aa	Predicted RBP	11.06	□□□□□ -0.64
NARF-222	ENST00000583908	PAK2	Q13177	524 aa		11.06	□□□□□ -0.64
NARF-222	ENST00000583908	CTTN	Q14247	550 aa	Known RBP	11.06	□□□□□ -0.64
NARF-222	ENST00000583908	HIC1	Q14526	733 aa		11.06	□□□□□ -0.64
NARF-222	ENST00000583908	PDIA5	Q14554	519 aa		11.06	□□□□□ -0.64
NARF-222	ENST00000583908	C9orf50	Q5SZB4	431 aa		11.06	□□□□□ -0.64
NARF-222	ENST00000583908	EFCAB12	Q6NXP0	572 aa		11.06	□□□□□ -0.64
NARF-222	ENST00000583908	KCTD17	Q8N5Z5	321 aa		11.06	□□□□□ -0.64
NARF-222	ENST00000583908	RASSF8	Q8NHQ8	419 aa		11.06	□□□□□ -0.64
NARF-222	ENST00000583908	SNX29	Q8TEQ0	813 aa		11.06	□□□□□ -0.64
NARF-222	ENST00000583908	WNT8B	Q93098	351 aa		11.06	□□□□□ -0.64
NARF-222	ENST00000583908	CDK5RAP3	Q96JB5	506 aa		11.06	□□□□□ -0.64
NARF-222	ENST00000583908	AK8	Q96MA6	479 aa		11.06	□□□□□ -0.64
NARF-222	ENST00000583908	NACC1	Q96RE7	527 aa		11.06	□□□□□ -0.64
NARF-222	ENST00000583908	POLR3C	Q9BUI4	534 aa	Predicted RBP	11.06	□□□□□ -0.64
NARF-222	ENST00000583908	CELF4	Q9BZC1	486 aa	Known RBP	11.06	□□□□□ -0.64
NARF-222	ENST00000583908	INO80B	Q9C086	356 aa	Predicted RBP	11.06	□□□□□ -0.64
NARF-222	ENST00000583908	TMEM60	Q9H2L4	133 aa		11.06	□□□□□ -0.64
NARF-222	ENST00000583908	SUGCT	Q9HAC7	445 aa		11.06	□□□□□ -0.64
NARF-222	ENST00000583908	ANKEF1	Q9NU02	776 aa		11.06	□□□□□ -0.64
NARF-222	ENST00000583908	MSRA	Q9UJ68	235 aa		11.06	□□□□□ -0.64
NARF-222	ENST00000583908	GINS2	Q9Y248	185 aa		11.06	□□□□□ -0.64
NARF-222	ENST00000583908	ZBTB42	B2RXF5	422 aa		11.05	□□□□□ -0.64
NARF-222	ENST00000583908	GPR182	O15218	404 aa		11.05	□□□□□ -0.64
NARF-222	ENST00000583908	SLC26A4	O43511	780 aa		11.05	□□□□□ -0.64
NARF-222	ENST00000583908	NBN	O60934	754 aa		11.05	□□□□□ -0.64
NARF-222	ENST00000583908	DGAT1	O75907	488 aa		11.05	□□□□□ -0.64
NARF-222	ENST00000583908	GHR	P10912	638 aa		11.05	□□□□□ -0.64
NARF-222	ENST00000583908	RPA1	P27694	616 aa		11.05	□□□□□ -0.64
NARF-222	ENST00000583908	TXLNA	P40222	546 aa		11.05	□□□□□ -0.64
NARF-222	ENST00000583908	CCT6A	P40227	531 aa	Known RBP	11.05	□□□□□ -0.64
NARF-222	ENST00000583908	CRYBB1	P53674	252 aa	Predicted RBP	11.05	□□□□□ -0.64
NARF-222	ENST00000583908	MGAT3	Q09327	533 aa		11.05	□□□□□ -0.64
NARF-222	ENST00000583908	NBR1	Q14596	966 aa		11.05	□□□□□ -0.64
NARF-222	ENST00000583908	TARBP2	Q15633	366 aa	Known RBP	11.05	□□□□□ -0.64
NARF-222	ENST00000583908	PLEKHG4	Q58EX7	1191 aa		11.05	□□□□□ -0.64
NARF-222	ENST00000583908	XKR9	Q5GH70	373 aa		11.05	□□□□□ -0.64
NARF-222	ENST00000583908	FERMT3	Q86UX7	667 aa		11.05	□□□□□ -0.64
NARF-222	ENST00000583908	ZNF410	Q86VK4	478 aa		11.05	□□□□□ -0.64
NARF-222	ENST00000583908	NLRP7	Q8WX94	980 aa		11.05	□□□□□ -0.64
NARF-222	ENST00000583908	PSPC1	Q8WXF1	523 aa	Known RBP	11.05	□□□□□ -0.64

Retrieved 100 of 20,778 RNA–protein pairs in 17.2 ms