RNA–Protein interactions for RNA: ENST00000583741.1

SRSF1-206, Transcript of serine and arginine rich splicing factor 1, humanhuman

TSL 5

Gene SRSF1, Length 1,465 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRSF1-206ENST00000583741 ST18O60284 1047 aa23.3■■□□□ 1.32
SRSF1-206ENST00000583741 STAG3L1P0CL83 205 aa23.3■■□□□ 1.32
SRSF1-206ENST00000583741 NRIP1P48552 1158 aa23.3■■□□□ 1.32
SRSF1-206ENST00000583741 STAT5BP51692 787 aa23.3■■□□□ 1.32
SRSF1-206ENST00000583741 BLOC1S2Q6QNY1 142 aa23.3■■□□□ 1.32
SRSF1-206ENST00000583741 PPP2R3CQ969Q6 453 aa23.3■■□□□ 1.32
SRSF1-206ENST00000583741 SDF4Q9BRK5 362 aa23.3■■□□□ 1.32
SRSF1-206ENST00000583741 CNTNAP5Q8WYK1 1306 aa23.3■■□□□ 1.32
SRSF1-206ENST00000583741 SMIM35A0A1B0GVV1 85 aa23.3■■□□□ 1.32
SRSF1-206ENST00000583741 MGEA5O60502 916 aa23.3■■□□□ 1.32
SRSF1-206ENST00000583741 IBSPP21815 317 aaPredicted RBP23.3■■□□□ 1.32
SRSF1-206ENST00000583741 KRT76Q01546 638 aa23.3■■□□□ 1.32
SRSF1-206ENST00000583741 MTHFD1LQ6UB35 978 aa23.3■■□□□ 1.32
SRSF1-206ENST00000583741 RUFY3Q7L099 469 aa23.3■■□□□ 1.32
SRSF1-206ENST00000583741 RBM23Q86U06 439 aaKnown RBP23.3■■□□□ 1.32
SRSF1-206ENST00000583741 BARX2Q9UMQ3 279 aaPredicted RBP23.3■■□□□ 1.32
SRSF1-206ENST00000583741 ZDBF2Q9HCK1 2354 aa23.29■■□□□ 1.32
SRSF1-206ENST00000583741 HMGB1P09429 215 aaKnown RBP23.29■■□□□ 1.32
SRSF1-206ENST00000583741 COASYQ13057 564 aa23.29■■□□□ 1.32
SRSF1-206ENST00000583741 EDAQ92838 391 aa23.29■■□□□ 1.32
SRSF1-206ENST00000583741 TNPO1Q92973 898 aaKnown RBP23.29■■□□□ 1.32
SRSF1-206ENST00000583741 MFSD14AQ96MC6 490 aa23.29■■□□□ 1.32
SRSF1-206ENST00000583741 AGO4Q9HCK5 861 aaKnown RBP23.29■■□□□ 1.32
SRSF1-206ENST00000583741 LRFN2Q9ULH4 789 aa23.29■■□□□ 1.32
SRSF1-206ENST00000583741 PPFIA3O75145 1194 aa23.28■■□□□ 1.32
SRSF1-206ENST00000583741 CCNE2O96020 404 aa23.28■■□□□ 1.32
SRSF1-206ENST00000583741 CPA1P15085 419 aa23.28■■□□□ 1.32
SRSF1-206ENST00000583741 SARSP49591 514 aaKnown RBP23.28■■□□□ 1.32
SRSF1-206ENST00000583741 NFX1Q12986 1120 aaKnown RBP23.28■■□□□ 1.32
SRSF1-206ENST00000583741 CEP55Q53EZ4 464 aa23.28■■□□□ 1.32
SRSF1-206ENST00000583741 SGMS1Q86VZ5 419 aa23.28■■□□□ 1.32
SRSF1-206ENST00000583741 TMEM40Q8WWA1 233 aa23.28■■□□□ 1.32
SRSF1-206ENST00000583741 CDHR5Q9HBB8 845 aa23.28■■□□□ 1.32
SRSF1-206ENST00000583741 ERVK-5Q9HDB9 667 aa23.28■■□□□ 1.32
SRSF1-206ENST00000583741 GINS2Q9Y248 185 aa23.28■■□□□ 1.32
SRSF1-206ENST00000583741 IGKV6D-21A0A0A0MT36 114 aa23.27■■□□□ 1.32
SRSF1-206ENST00000583741 ATG7O95352 703 aa23.27■■□□□ 1.32
SRSF1-206ENST00000583741 NAPAP54920 295 aa23.27■■□□□ 1.32
SRSF1-206ENST00000583741 RBM10P98175 930 aaKnown RBP23.27■■□□□ 1.32
SRSF1-206ENST00000583741 BECN1Q14457 450 aa23.27■■□□□ 1.32
SRSF1-206ENST00000583741 NME8Q8N427 588 aa23.27■■□□□ 1.32
SRSF1-206ENST00000583741 SNX21Q969T3 373 aa23.27■■□□□ 1.32
SRSF1-206ENST00000583741 ANO3Q9BYT9 981 aa23.27■■□□□ 1.32
SRSF1-206ENST00000583741 RIC8AQ9NPQ8 531 aa23.27■■□□□ 1.32
SRSF1-206ENST00000583741 HCSTQ9UBK5 93 aa23.27■■□□□ 1.32
SRSF1-206ENST00000583741 NOC2LQ9Y3T9 749 aaKnown RBP23.27■■□□□ 1.32
SRSF1-206ENST00000583741 USP15Q9Y4E8 981 aaPredicted RBP23.27■■□□□ 1.32
SRSF1-206ENST00000583741 LOC730098B7Z3J9 87 aa23.26■■□□□ 1.31
SRSF1-206ENST00000583741 RPS6KB1P23443 525 aa23.26■■□□□ 1.31
SRSF1-206ENST00000583741 KLRC1P26715 233 aa23.26■■□□□ 1.31
SRSF1-206ENST00000583741 HSCBQ8IWL3 235 aa23.26■■□□□ 1.31
SRSF1-206ENST00000583741 DDX39AO00148 427 aaKnown RBP23.25■■□□□ 1.31
SRSF1-206ENST00000583741 MEIS1O00470 390 aa23.25■■□□□ 1.31
SRSF1-206ENST00000583741 SLC26A2P50443 739 aa23.25■■□□□ 1.31
SRSF1-206ENST00000583741 KIAA0319LQ8IZA0 1049 aa23.25■■□□□ 1.31
SRSF1-206ENST00000583741 VN1R2Q8NFZ6 395 aa23.25■■□□□ 1.31
SRSF1-206ENST00000583741 PDRG1Q9NUG6 133 aa23.25■■□□□ 1.31
SRSF1-206ENST00000583741 TMEM260Q9NX78 707 aa23.25■■□□□ 1.31
SRSF1-206ENST00000583741 KMT2EQ8IZD2 1858 aa23.25■■□□□ 1.31
SRSF1-206ENST00000583741 PER2O15055 1255 aa23.24■■□□□ 1.31
SRSF1-206ENST00000583741 RPS6KA5O75582 802 aa23.24■■□□□ 1.31
SRSF1-206ENST00000583741 CD2BP2O95400 341 aaKnown RBP23.24■■□□□ 1.31
SRSF1-206ENST00000583741 FUT2Q10981 343 aa23.24■■□□□ 1.31
SRSF1-206ENST00000583741 FAM102BQ5T8I3 360 aa23.24■■□□□ 1.31
SRSF1-206ENST00000583741 PPP1R18Q6NYC8 613 aa23.24■■□□□ 1.31
SRSF1-206ENST00000583741 APOA5Q6Q788 366 aa23.24■■□□□ 1.31
SRSF1-206ENST00000583741 ABHD15Q6UXT9 468 aa23.24■■□□□ 1.31
SRSF1-206ENST00000583741 TRIM67Q6ZTA4 783 aa23.24■■□□□ 1.31
SRSF1-206ENST00000583741 DHX32Q7L7V1 743 aaKnown RBP23.24■■□□□ 1.31
SRSF1-206ENST00000583741 CCDC60Q8IWA6 550 aaPredicted RBP23.24■■□□□ 1.31
SRSF1-206ENST00000583741 ATP8B4Q8TF62 1192 aa23.24■■□□□ 1.31
SRSF1-206ENST00000583741 ADAM2Q99965 735 aa23.24■■□□□ 1.31
SRSF1-206ENST00000583741 TLE6Q9H808 572 aa23.24■■□□□ 1.31
SRSF1-206ENST00000583741 PCDHB7Q9Y5E2 793 aa23.24■■□□□ 1.31
SRSF1-206ENST00000583741 MYH9P35579 1960 aaKnown RBP23.24■■□□□ 1.31
SRSF1-206ENST00000583741 TBKBP1A7MCY6 615 aa23.24■■□□□ 1.31
SRSF1-206ENST00000583741 ZBTB42B2RXF5 422 aa23.24■■□□□ 1.31
SRSF1-206ENST00000583741 FOSP01100 380 aaPredicted RBP23.24■■□□□ 1.31
SRSF1-206ENST00000583741 SREBF1P36956 1147 aa23.24■■□□□ 1.31
SRSF1-206ENST00000583741 ADCY7P51828 1080 aa23.24■■□□□ 1.31
SRSF1-206ENST00000583741 CBX2Q14781 532 aaPredicted RBP23.24■■□□□ 1.31
SRSF1-206ENST00000583741 PRSS33Q8NF86 280 aa23.24■■□□□ 1.31
SRSF1-206ENST00000583741 IPO9Q96P70 1041 aaKnown RBP23.24■■□□□ 1.31
SRSF1-206ENST00000583741 PHOX2BQ99453 314 aa23.24■■□□□ 1.31
SRSF1-206ENST00000583741 TLR9Q9NR96 1032 aa23.24■■□□□ 1.31
SRSF1-206ENST00000583741 ST3GAL5Q9UNP4 418 aa23.24■■□□□ 1.31
SRSF1-206ENST00000583741 PCDHB12Q9Y5F1 795 aa23.24■■□□□ 1.31
SRSF1-206ENST00000583741 TMEM221A6NGB7 291 aa23.23■■□□□ 1.31
SRSF1-206ENST00000583741 C9IYK1 514 aa23.23■■□□□ 1.31
SRSF1-206ENST00000583741 M0R296 226 aa23.23■■□□□ 1.31
SRSF1-206ENST00000583741 BACH1O14867 736 aa23.23■■□□□ 1.31
SRSF1-206ENST00000583741 HBP1O60381 514 aa23.23■■□□□ 1.31
SRSF1-206ENST00000583741 SPOUT1Q5T280 376 aaKnown RBP23.23■■□□□ 1.31
SRSF1-206ENST00000583741 IER5LQ5T953 404 aa23.23■■□□□ 1.31
SRSF1-206ENST00000583741 BMP8AQ7Z5Y6 402 aa23.23■■□□□ 1.31
SRSF1-206ENST00000583741 MICAL1Q8TDZ2 1067 aa23.23■■□□□ 1.31
SRSF1-206ENST00000583741 PPP1R16BQ96T49 567 aa23.23■■□□□ 1.31
SRSF1-206ENST00000583741 RGS18Q9NS28 235 aa23.23■■□□□ 1.31
SRSF1-206ENST00000583741 COL1A2P08123 1366 aa23.22■■□□□ 1.31
SRSF1-206ENST00000583741 DENND3A2RUS2 1198 aa23.22■■□□□ 1.31
Retrieved 100 of 20,778 RNA–protein pairs in 77.5 ms