RNA–Protein interactions for RNA: ENST00000583569.5

NUP85-222, Transcript of nucleoporin 85, human

TSL 5

Gene NUP85, Length 553 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
NUP85-222	ENST00000583569	LINC00482	Q8N8I6	264 aa		6	□□□□□ -1.45
NUP85-222	ENST00000583569	ZNF496	Q96IT1	587 aa	Predicted RBP	6	□□□□□ -1.45
NUP85-222	ENST00000583569	CEP89	Q96ST8	783 aa		6	□□□□□ -1.45
NUP85-222	ENST00000583569	FOXB1	Q99853	325 aa		6	□□□□□ -1.45
NUP85-222	ENST00000583569	TACO1	Q9BSH4	297 aa	Known RBP	6	□□□□□ -1.45
NUP85-222	ENST00000583569	ZDHHC5	Q9C0B5	715 aa		6	□□□□□ -1.45
NUP85-222	ENST00000583569	POFUT1	Q9H488	388 aa		6	□□□□□ -1.45
NUP85-222	ENST00000583569	VTA1	Q9NP79	307 aa		6	□□□□□ -1.45
NUP85-222	ENST00000583569	TOPORS	Q9NS56	1045 aa	Predicted RBP	6	□□□□□ -1.45
NUP85-222	ENST00000583569	TYW1	Q9NV66	732 aa	Known RBP	6	□□□□□ -1.45
NUP85-222	ENST00000583569	USP36	Q9P275	1121 aa	Known RBP	6	□□□□□ -1.45
NUP85-222	ENST00000583569	KCNG1	Q9UIX4	513 aa		6	□□□□□ -1.45
NUP85-222	ENST00000583569	ZFP69B	Q9UJL9	534 aa		6	□□□□□ -1.45
NUP85-222	ENST00000583569	KCTD3	Q9Y597	815 aa		6	□□□□□ -1.45
NUP85-222	ENST00000583569	WASHC2C	Q9Y4E1	1318 aa		5.99	□□□□□ -1.45
NUP85-222	ENST00000583569	CYP7B1	O75881	506 aa		5.99	□□□□□ -1.45
NUP85-222	ENST00000583569	PRL	P01236	227 aa		5.99	□□□□□ -1.45
NUP85-222	ENST00000583569	PLA2G1B	P04054	148 aa	Known RBP	5.99	□□□□□ -1.45
NUP85-222	ENST00000583569	KRT1	P04264	644 aa		5.99	□□□□□ -1.45
NUP85-222	ENST00000583569	PDGFRB	P09619	1106 aa		5.99	□□□□□ -1.45
NUP85-222	ENST00000583569	ALDH6A1	Q02252	535 aa	Known RBP	5.99	□□□□□ -1.45
NUP85-222	ENST00000583569	ZNF385B	Q569K4	471 aa		5.99	□□□□□ -1.45
NUP85-222	ENST00000583569	SLFN12L	Q6IEE8	588 aa		5.99	□□□□□ -1.45
NUP85-222	ENST00000583569	LRSAM1	Q6UWE0	723 aa		5.99	□□□□□ -1.45
NUP85-222	ENST00000583569	DPP8	Q6V1X1	898 aa	Predicted RBP	5.99	□□□□□ -1.45
NUP85-222	ENST00000583569	POU5F2	Q8N7G0	328 aa		5.99	□□□□□ -1.45
NUP85-222	ENST00000583569	STPG3	Q8N7X2	389 aa		5.99	□□□□□ -1.45
NUP85-222	ENST00000583569	FNIP1	Q8TF40	1166 aa		5.99	□□□□□ -1.45
NUP85-222	ENST00000583569	STAG1	Q8WVM7	1258 aa		5.99	□□□□□ -1.45
NUP85-222	ENST00000583569	MAML3	Q96JK9	1138 aa		5.99	□□□□□ -1.45
NUP85-222	ENST00000583569	MYL10	Q9BUA6	226 aa		5.99	□□□□□ -1.45
NUP85-222	ENST00000583569	BTBD2	Q9BX70	525 aa		5.99	□□□□□ -1.45
NUP85-222	ENST00000583569	AMN	Q9BXJ7	453 aa		5.99	□□□□□ -1.45
NUP85-222	ENST00000583569	TRIM8	Q9BZR9	551 aa		5.99	□□□□□ -1.45
NUP85-222	ENST00000583569	C14orf119	Q9NWQ9	140 aa		5.99	□□□□□ -1.45
NUP85-222	ENST00000583569	PRPF6	O94906	941 aa	Known RBP	5.98	□□□□□ -1.45
NUP85-222	ENST00000583569	TSPAN15	O95858	294 aa		5.98	□□□□□ -1.45
NUP85-222	ENST00000583569	IL18BP	O95998	194 aa		5.98	□□□□□ -1.45
NUP85-222	ENST00000583569	HSP90B1	P14625	803 aa	Known RBP	5.98	□□□□□ -1.45
NUP85-222	ENST00000583569	RAP1GAP	P47736	663 aa		5.98	□□□□□ -1.45
NUP85-222	ENST00000583569	RGS3	P49796	1198 aa		5.98	□□□□□ -1.45
NUP85-222	ENST00000583569	SCAND1	P57086	179 aa		5.98	□□□□□ -1.45
NUP85-222	ENST00000583569	HTRA3	P83110	453 aa		5.98	□□□□□ -1.45
NUP85-222	ENST00000583569	EXOSC10	Q01780	885 aa	Known RBP	5.98	□□□□□ -1.45
NUP85-222	ENST00000583569	RTP5	Q14D33	572 aa		5.98	□□□□□ -1.45
NUP85-222	ENST00000583569	RGL3	Q3MIN7	710 aa		5.98	□□□□□ -1.45
NUP85-222	ENST00000583569	ESPNL	Q6ZVH7	1005 aa		5.98	□□□□□ -1.45
NUP85-222	ENST00000583569	BHLHE22	Q8NFJ8	381 aa	Predicted RBP	5.98	□□□□□ -1.45
NUP85-222	ENST00000583569	FERMT2	Q96AC1	680 aa		5.98	□□□□□ -1.45
NUP85-222	ENST00000583569	CCDC8	Q9H0W5	538 aa	Predicted RBP	5.98	□□□□□ -1.45
NUP85-222	ENST00000583569	OR10A5	Q9H207	317 aa		5.98	□□□□□ -1.45
NUP85-222	ENST00000583569	SEMA4A	Q9H3S1	761 aa		5.98	□□□□□ -1.45
NUP85-222	ENST00000583569	EPB41L4A	Q9HCS5	686 aa	Predicted RBP	5.98	□□□□□ -1.45
NUP85-222	ENST00000583569	CD320	Q9NPF0	282 aa		5.98	□□□□□ -1.45
NUP85-222	ENST00000583569	LOC100996750	A0A140TA64	210 aa		5.97	□□□□□ -1.45
NUP85-222	ENST00000583569	GOLGA8A	A7E2F4	631 aa		5.97	□□□□□ -1.45
NUP85-222	ENST00000583569	GOLGA8B	A8MQT2	603 aa		5.97	□□□□□ -1.45
NUP85-222	ENST00000583569	NPIPB6	E9PJ23	425 aa		5.97	□□□□□ -1.45
NUP85-222	ENST00000583569	HMGB1	P09429	215 aa	Known RBP	5.97	□□□□□ -1.45
NUP85-222	ENST00000583569	APEX1	P27695	318 aa	Known RBP	5.97	□□□□□ -1.45
NUP85-222	ENST00000583569	LINC00310	P59036	64 aa		5.97	□□□□□ -1.45
NUP85-222	ENST00000583569	IL13RA1	P78552	427 aa		5.97	□□□□□ -1.45
NUP85-222	ENST00000583569	ADCY2	Q08462	1091 aa		5.97	□□□□□ -1.45
NUP85-222	ENST00000583569	KCNA10	Q16322	511 aa		5.97	□□□□□ -1.45
NUP85-222	ENST00000583569	WDR72	Q3MJ13	1102 aa		5.97	□□□□□ -1.45
NUP85-222	ENST00000583569	SYDE2	Q5VT97	1194 aa		5.97	□□□□□ -1.45
NUP85-222	ENST00000583569	TTLL7	Q6ZT98	887 aa		5.97	□□□□□ -1.45
NUP85-222	ENST00000583569	SMAD5	Q99717	465 aa	Known RBP	5.97	□□□□□ -1.45
NUP85-222	ENST00000583569	MENT	Q9BUN1	341 aa		5.97	□□□□□ -1.45
NUP85-222	ENST00000583569	KRTAP4-6	Q9BYQ5	205 aa		5.97	□□□□□ -1.45
NUP85-222	ENST00000583569	ANO3	Q9BYT9	981 aa		5.97	□□□□□ -1.45
NUP85-222	ENST00000583569	TRHDE	Q9UKU6	1024 aa		5.97	□□□□□ -1.45
NUP85-222	ENST00000583569	WASHC2A	Q641Q2	1341 aa		5.97	□□□□□ -1.45
NUP85-222	ENST00000583569	ST20-MTHFS	A0A0A6YYL1	179 aa		5.96	□□□□□ -1.46
NUP85-222	ENST00000583569	ERVK-21	P61565	698 aa		5.96	□□□□□ -1.46
NUP85-222	ENST00000583569	KLF1	Q13351	362 aa	Predicted RBP	5.96	□□□□□ -1.46
NUP85-222	ENST00000583569	MYBPC3	Q14896	1274 aa		5.96	□□□□□ -1.46
NUP85-222	ENST00000583569	PDCD1	Q15116	288 aa		5.96	□□□□□ -1.46
NUP85-222	ENST00000583569	KIAA1841	Q6NSI8	718 aa		5.96	□□□□□ -1.46
NUP85-222	ENST00000583569	TRMT10B	Q6PF06	316 aa	Known RBP	5.96	□□□□□ -1.46
NUP85-222	ENST00000583569	CXorf67	Q86X51	503 aa	Predicted RBP	5.96	□□□□□ -1.46
NUP85-222	ENST00000583569	CMIP	Q8IY22	773 aa		5.96	□□□□□ -1.46
NUP85-222	ENST00000583569	RPGR	Q92834	1020 aa	Known RBP	5.96	□□□□□ -1.46
NUP85-222	ENST00000583569	FMNL2	Q96PY5	1086 aa		5.96	□□□□□ -1.46
NUP85-222	ENST00000583569	ASPSCR1	Q9BZE9	553 aa		5.96	□□□□□ -1.46
NUP85-222	ENST00000583569	KCND1	Q9NSA2	647 aa		5.96	□□□□□ -1.46
NUP85-222	ENST00000583569	SPATA6	Q9NWH7	488 aa	Predicted RBP	5.96	□□□□□ -1.46
NUP85-222	ENST00000583569	NTM	Q9P121	344 aa		5.96	□□□□□ -1.46
NUP85-222	ENST00000583569		H0Y858	1186 aa		5.95	□□□□□ -1.46
NUP85-222	ENST00000583569		K7ESF4	209 aa		5.95	□□□□□ -1.46
NUP85-222	ENST00000583569	ELL2	O00472	640 aa	Predicted RBP	5.95	□□□□□ -1.46
NUP85-222	ENST00000583569	CHGB	P05060	677 aa		5.95	□□□□□ -1.46
NUP85-222	ENST00000583569	CLEC2L	P0C7M8	214 aa		5.95	□□□□□ -1.46
NUP85-222	ENST00000583569	IL13	P35225	146 aa		5.95	□□□□□ -1.46
NUP85-222	ENST00000583569	AFF3	P51826	1226 aa	Known RBP	5.95	□□□□□ -1.46
NUP85-222	ENST00000583569	MLLT6	P55198	1093 aa	Predicted RBP	5.95	□□□□□ -1.46
NUP85-222	ENST00000583569	BCAR1	P56945	870 aa		5.95	□□□□□ -1.46
NUP85-222	ENST00000583569	CD83	Q01151	205 aa		5.95	□□□□□ -1.46
NUP85-222	ENST00000583569	NOLC1	Q14978	699 aa	Known RBP eCLIP	5.95	□□□□□ -1.46
NUP85-222	ENST00000583569	PLEKHG6	Q3KR16	790 aa		5.95	□□□□□ -1.46

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