RNA–Protein interactions for RNA: ENST00000582885.1

CCDC57-216, Transcript of coiled-coil domain containing 57, humanhuman

TSL 3

Gene CCDC57, Length 537 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC57-216ENST00000582885 KCNB1Q14721 858 aa13.36□□□□□ -0.27
CCDC57-216ENST00000582885 TARBP2Q15633 366 aaKnown RBP13.36□□□□□ -0.27
CCDC57-216ENST00000582885 FSCN1Q16658 493 aaKnown RBP13.36□□□□□ -0.27
CCDC57-216ENST00000582885 XKR9Q5GH70 373 aa13.36□□□□□ -0.27
CCDC57-216ENST00000582885 UTP14CQ5TAP6 766 aaKnown RBP13.36□□□□□ -0.27
CCDC57-216ENST00000582885 PADI6Q6TGC4 694 aa13.36□□□□□ -0.27
CCDC57-216ENST00000582885 GPBP1Q86WP2 473 aa13.36□□□□□ -0.27
CCDC57-216ENST00000582885 CKAP2LQ8IYA6 745 aa13.36□□□□□ -0.27
CCDC57-216ENST00000582885 DDX12PQ92771 950 aa13.36□□□□□ -0.27
CCDC57-216ENST00000582885 DNAJC19Q96DA6 116 aa13.36□□□□□ -0.27
CCDC57-216ENST00000582885 TUT1Q9H6E5 874 aaKnown RBP13.36□□□□□ -0.27
CCDC57-216ENST00000582885 RMND1Q9NWS8 449 aa13.36□□□□□ -0.27
CCDC57-216ENST00000582885 ZNF215Q9UL58 517 aaPredicted RBP13.36□□□□□ -0.27
CCDC57-216ENST00000582885 SYNRGQ9UMZ2 1314 aa13.36□□□□□ -0.27
CCDC57-216ENST00000582885 COL1A2P08123 1366 aa13.35□□□□□ -0.27
CCDC57-216ENST00000582885 SIP14410 1827 aa13.35□□□□□ -0.27
CCDC57-216ENST00000582885 A0A087WWV3 80 aa13.35□□□□□ -0.27
CCDC57-216ENST00000582885 KLRC4O43908 158 aa13.35□□□□□ -0.27
CCDC57-216ENST00000582885 ADAMTS4O75173 837 aa13.35□□□□□ -0.27
CCDC57-216ENST00000582885 DGAT1O75907 488 aa13.35□□□□□ -0.27
CCDC57-216ENST00000582885 F2P00734 622 aa13.35□□□□□ -0.27
CCDC57-216ENST00000582885 RPN1P04843 607 aaKnown RBP13.35□□□□□ -0.27
CCDC57-216ENST00000582885 GIT2Q14161 759 aa13.35□□□□□ -0.27
CCDC57-216ENST00000582885 PLCB4Q15147 1175 aa13.35□□□□□ -0.27
CCDC57-216ENST00000582885 ZNF484Q5JVG2 852 aa13.35□□□□□ -0.27
CCDC57-216ENST00000582885 FBXO46Q6PJ61 603 aaPredicted RBP13.35□□□□□ -0.27
CCDC57-216ENST00000582885 SASS6Q6UVJ0 657 aa13.35□□□□□ -0.27
CCDC57-216ENST00000582885 UNC13DQ70J99 1090 aa13.35□□□□□ -0.27
CCDC57-216ENST00000582885 EXOC8Q8IYI6 725 aa13.35□□□□□ -0.27
CCDC57-216ENST00000582885 KLHDC9Q8NEP7 349 aa13.35□□□□□ -0.27
CCDC57-216ENST00000582885 CCDC47Q96A33 483 aaKnown RBP13.35□□□□□ -0.27
CCDC57-216ENST00000582885 LENG1Q96BZ8 264 aaPredicted RBP13.35□□□□□ -0.27
CCDC57-216ENST00000582885 CCDC43Q96MW1 224 aaKnown RBP13.35□□□□□ -0.27
CCDC57-216ENST00000582885 CEP89Q96ST8 783 aa13.35□□□□□ -0.27
CCDC57-216ENST00000582885 FUCA2Q9BTY2 467 aa13.35□□□□□ -0.27
CCDC57-216ENST00000582885 GZF1Q9H116 711 aaPredicted RBP13.35□□□□□ -0.27
CCDC57-216ENST00000582885 BLZF1Q9H2G9 400 aa13.35□□□□□ -0.27
CCDC57-216ENST00000582885 XPNPEP3Q9NQH7 507 aa13.35□□□□□ -0.27
CCDC57-216ENST00000582885 PDLIM7Q9NR12 457 aa13.35□□□□□ -0.27
CCDC57-216ENST00000582885 CYP26B1Q9NR63 512 aa13.35□□□□□ -0.27
CCDC57-216ENST00000582885 SEPT9Q9UHD8 586 aaPredicted RBP13.35□□□□□ -0.27
CCDC57-216ENST00000582885 ODF2LQ9ULJ1 636 aa13.35□□□□□ -0.27
CCDC57-216ENST00000582885 HTTP42858 3142 aa13.34□□□□□ -0.27
CCDC57-216ENST00000582885 FRMD3A2A2Y4 597 aa13.34□□□□□ -0.27
CCDC57-216ENST00000582885 HAS3O00219 553 aa13.34□□□□□ -0.27
CCDC57-216ENST00000582885 ZEB2O60315 1214 aa13.34□□□□□ -0.27
CCDC57-216ENST00000582885 RHOBTB3O94955 611 aa13.34□□□□□ -0.27
CCDC57-216ENST00000582885 C6orf222P0C671 652 aaPredicted RBP13.34□□□□□ -0.27
CCDC57-216ENST00000582885 CCDC192P0DO97 292 aa13.34□□□□□ -0.27
CCDC57-216ENST00000582885 CASP1P29466 404 aa13.34□□□□□ -0.27
CCDC57-216ENST00000582885 RFC5P40937 340 aa13.34□□□□□ -0.27
CCDC57-216ENST00000582885 LBX1P52954 281 aa13.34□□□□□ -0.27
CCDC57-216ENST00000582885 ASIC1P78348 528 aa13.34□□□□□ -0.27
CCDC57-216ENST00000582885 PSMD2Q13200 908 aa13.34□□□□□ -0.27
CCDC57-216ENST00000582885 MORC3Q14149 939 aa13.34□□□□□ -0.27
CCDC57-216ENST00000582885 SLC9C1Q4G0N8 1177 aa13.34□□□□□ -0.27
CCDC57-216ENST00000582885 GNASQ5JWF2 1037 aa13.34□□□□□ -0.27
CCDC57-216ENST00000582885 PLA2G4FQ68DD2 849 aa13.34□□□□□ -0.27
CCDC57-216ENST00000582885 LRSAM1Q6UWE0 723 aa13.34□□□□□ -0.27
CCDC57-216ENST00000582885 TRIM50Q86XT4 487 aa13.34□□□□□ -0.27
CCDC57-216ENST00000582885 CCDC65Q8IXS2 484 aa13.34□□□□□ -0.27
CCDC57-216ENST00000582885 ERCC4Q92889 916 aaPredicted RBP13.34□□□□□ -0.27
CCDC57-216ENST00000582885 CEP170P1Q96L14 293 aa13.34□□□□□ -0.27
CCDC57-216ENST00000582885 RUSC1Q9BVN2 902 aa13.34□□□□□ -0.27
CCDC57-216ENST00000582885 KATNAL1Q9BW62 490 aa13.34□□□□□ -0.27
CCDC57-216ENST00000582885 DHX33Q9H6R0 707 aaKnown RBP13.34□□□□□ -0.27
CCDC57-216ENST00000582885 MAN1B1Q9UKM7 699 aa13.34□□□□□ -0.27
CCDC57-216ENST00000582885 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP13.33□□□□□ -0.28
CCDC57-216ENST00000582885 TMEM150BA6NC51 233 aa13.33□□□□□ -0.28
CCDC57-216ENST00000582885 GAS2O43903 313 aaKnown RBP13.33□□□□□ -0.28
CCDC57-216ENST00000582885 KRT18P05783 430 aaKnown RBP13.33□□□□□ -0.28
CCDC57-216ENST00000582885 ZNF286BP0CG31 522 aa13.33□□□□□ -0.28
CCDC57-216ENST00000582885 GAP43P17677 238 aa13.33□□□□□ -0.28
CCDC57-216ENST00000582885 ZNF131P52739 623 aa13.33□□□□□ -0.28
CCDC57-216ENST00000582885 NPEPPSP55786 919 aa13.33□□□□□ -0.28
CCDC57-216ENST00000582885 NLRP12P59046 1061 aa13.33□□□□□ -0.28
CCDC57-216ENST00000582885 PURAQ00577 322 aaKnown RBP13.33□□□□□ -0.28
CCDC57-216ENST00000582885 EHHADHQ08426 723 aa13.33□□□□□ -0.28
CCDC57-216ENST00000582885 KMT5BQ4FZB7 885 aa13.33□□□□□ -0.28
CCDC57-216ENST00000582885 LHX8Q68G74 356 aa13.33□□□□□ -0.28
CCDC57-216ENST00000582885 CCSAPQ6IQ19 270 aaPredicted RBP13.33□□□□□ -0.28
CCDC57-216ENST00000582885 DYMQ7RTS9 669 aa13.33□□□□□ -0.28
CCDC57-216ENST00000582885 PCSK9Q8NBP7 692 aaKnown RBP13.33□□□□□ -0.28
CCDC57-216ENST00000582885 MCPH1Q8NEM0 835 aa13.33□□□□□ -0.28
CCDC57-216ENST00000582885 KAT2BQ92831 832 aa13.33□□□□□ -0.28
CCDC57-216ENST00000582885 JPH2Q9BR39 696 aaPredicted RBP13.33□□□□□ -0.28
CCDC57-216ENST00000582885 REEP2Q9BRK0 252 aa13.33□□□□□ -0.28
CCDC57-216ENST00000582885 TSEN34Q9BSV6 310 aaKnown RBP13.33□□□□□ -0.28
CCDC57-216ENST00000582885 XRN2Q9H0D6 950 aaKnown RBP eCLIP13.33□□□□□ -0.28
CCDC57-216ENST00000582885 RNPEPQ9H4A4 650 aa13.33□□□□□ -0.28
CCDC57-216ENST00000582885 SEL1LQ9UBV2 794 aa13.33□□□□□ -0.28
CCDC57-216ENST00000582885 COL4A3BPQ9Y5P4 624 aa13.33□□□□□ -0.28
CCDC57-216ENST00000582885 ZBTB42B2RXF5 422 aa13.32□□□□□ -0.28
CCDC57-216ENST00000582885 MAFO75444 373 aaPredicted RBP13.32□□□□□ -0.28
CCDC57-216ENST00000582885 CAVIN2O95810 425 aa13.32□□□□□ -0.28
CCDC57-216ENST00000582885 PGK1P00558 417 aa13.32□□□□□ -0.28
CCDC57-216ENST00000582885 MARK3P27448 753 aa13.32□□□□□ -0.28
CCDC57-216ENST00000582885 RTP1P59025 263 aa13.32□□□□□ -0.28
CCDC57-216ENST00000582885 BEX3Q00994 111 aa13.32□□□□□ -0.28
CCDC57-216ENST00000582885 TYRO3Q06418 890 aa13.32□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 15.2 ms