RNA–Protein interactions for RNA: ENST00000582486.5

GGA3-213, Transcript of golgi associated, gamma adaptin ear containing, ARF binding protein 3, humanhuman

TSL 5 BASIC

Gene GGA3, Length 2,319 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GGA3-213ENST00000582486 SYCP1Q15431 976 aa12.36□□□□□ -0.43
GGA3-213ENST00000582486 CCDC40Q4G0X9 1142 aa12.36□□□□□ -0.43
GGA3-213ENST00000582486 PLA2G4FQ68DD2 849 aa12.36□□□□□ -0.43
GGA3-213ENST00000582486 ZNF720Q7Z2F6 126 aa12.36□□□□□ -0.43
GGA3-213ENST00000582486 FAM178BQ8IXR5 827 aa12.36□□□□□ -0.43
GGA3-213ENST00000582486 ZC3H3Q8IXZ2 948 aaKnown RBP12.36□□□□□ -0.43
GGA3-213ENST00000582486 MS4A4AQ96JQ5 239 aa12.36□□□□□ -0.43
GGA3-213ENST00000582486 CCDC43Q96MW1 224 aaKnown RBP12.36□□□□□ -0.43
GGA3-213ENST00000582486 GBA2Q9HCG7 927 aaPredicted RBP12.36□□□□□ -0.43
GGA3-213ENST00000582486 SEL1LQ9UBV2 794 aa12.36□□□□□ -0.43
GGA3-213ENST00000582486 R3HCC1Q9Y3T6 440 aaKnown RBP12.36□□□□□ -0.43
GGA3-213ENST00000582486 DOCK5Q9H7D0 1870 aa12.35□□□□□ -0.43
GGA3-213ENST00000582486 TTC26A0AVF1 554 aa12.35□□□□□ -0.43
GGA3-213ENST00000582486 PDXKO00764 312 aa12.35□□□□□ -0.43
GGA3-213ENST00000582486 CETN3O15182 167 aa12.35□□□□□ -0.43
GGA3-213ENST00000582486 EDNRBP24530 442 aa12.35□□□□□ -0.43
GGA3-213ENST00000582486 ACTR2P61160 394 aa12.35□□□□□ -0.43
GGA3-213ENST00000582486 ERVK-9P63128 1117 aa12.35□□□□□ -0.43
GGA3-213ENST00000582486 ERVK-24P63145 666 aa12.35□□□□□ -0.43
GGA3-213ENST00000582486 FKBP15Q5T1M5 1219 aa12.35□□□□□ -0.43
GGA3-213ENST00000582486 WDR78Q5VTH9 848 aa12.35□□□□□ -0.43
GGA3-213ENST00000582486 SWSAP1Q6NVH7 229 aa12.35□□□□□ -0.43
GGA3-213ENST00000582486 ANO5Q75V66 913 aa12.35□□□□□ -0.43
GGA3-213ENST00000582486 CYFIP1Q7L576 1253 aa12.35□□□□□ -0.43
GGA3-213ENST00000582486 KSR1Q8IVT5 923 aa12.35□□□□□ -0.43
GGA3-213ENST00000582486 RASSF10A6NK89 507 aa12.34□□□□□ -0.43
GGA3-213ENST00000582486 EIF3DO15371 548 aaKnown RBP eCLIP12.34□□□□□ -0.43
GGA3-213ENST00000582486 CALUO43852 315 aaPredicted RBP12.34□□□□□ -0.43
GGA3-213ENST00000582486 ZNF862O60290 1169 aa12.34□□□□□ -0.43
GGA3-213ENST00000582486 CELF2O95319 508 aaKnown RBP12.34□□□□□ -0.43
GGA3-213ENST00000582486 PSAPP07602 524 aa12.34□□□□□ -0.43
GGA3-213ENST00000582486 KRT9P35527 623 aa12.34□□□□□ -0.43
GGA3-213ENST00000582486 XKR9Q5GH70 373 aa12.34□□□□□ -0.43
GGA3-213ENST00000582486 ABHD15Q6UXT9 468 aa12.34□□□□□ -0.43
GGA3-213ENST00000582486 ERGIC2Q96RQ1 377 aa12.34□□□□□ -0.43
GGA3-213ENST00000582486 IKZF4Q9H2S9 585 aa12.34□□□□□ -0.43
GGA3-213ENST00000582486 ABHD10Q9NUJ1 306 aa12.34□□□□□ -0.43
GGA3-213ENST00000582486 TYW1Q9NV66 732 aaKnown RBP12.34□□□□□ -0.43
GGA3-213ENST00000582486 SOWAHDA6NJG2 315 aa12.34□□□□□ -0.43
GGA3-213ENST00000582486 PDHXO00330 501 aa12.34□□□□□ -0.43
GGA3-213ENST00000582486 CLIC2O15247 247 aa12.34□□□□□ -0.43
GGA3-213ENST00000582486 TGFB1I1O43294 461 aa12.34□□□□□ -0.43
GGA3-213ENST00000582486 GNA14O95837 355 aa12.34□□□□□ -0.43
GGA3-213ENST00000582486 CETPP11597 493 aa12.34□□□□□ -0.43
GGA3-213ENST00000582486 COPB2P35606 906 aa12.34□□□□□ -0.43
GGA3-213ENST00000582486 FKBP1BP68106 108 aa12.34□□□□□ -0.43
GGA3-213ENST00000582486 KCTD2Q14681 263 aa12.34□□□□□ -0.43
GGA3-213ENST00000582486 EEPD1Q7L9B9 569 aa12.34□□□□□ -0.43
GGA3-213ENST00000582486 CCDC60Q8IWA6 550 aaPredicted RBP12.34□□□□□ -0.43
GGA3-213ENST00000582486 SMCR8Q8TEV9 937 aaPredicted RBP12.34□□□□□ -0.43
GGA3-213ENST00000582486 ATP6V0A1Q93050 837 aa12.34□□□□□ -0.43
GGA3-213ENST00000582486 CCDC51Q96ER9 411 aa12.34□□□□□ -0.43
GGA3-213ENST00000582486 PPP1R13BQ96KQ4 1090 aa12.34□□□□□ -0.43
GGA3-213ENST00000582486 PCMTD1Q96MG8 357 aaPredicted RBP12.34□□□□□ -0.43
GGA3-213ENST00000582486 MMP19Q99542 508 aa12.34□□□□□ -0.43
GGA3-213ENST00000582486 PDCL3Q9H2J4 239 aa12.34□□□□□ -0.43
GGA3-213ENST00000582486 ANKEF1Q9NU02 776 aa12.34□□□□□ -0.43
GGA3-213ENST00000582486 PNMA3Q9UL41 463 aa12.34□□□□□ -0.43
GGA3-213ENST00000582486 MYH11P35749 1972 aa12.34□□□□□ -0.43
GGA3-213ENST00000582486 CCL15-CCL14A0A0B4J2E2 113 aa12.33□□□□□ -0.44
GGA3-213ENST00000582486 BTBD19C9JJ37 291 aa12.33□□□□□ -0.44
GGA3-213ENST00000582486 TNNT1P13805 278 aa12.33□□□□□ -0.44
GGA3-213ENST00000582486 TRIM21P19474 475 aaKnown RBP12.33□□□□□ -0.44
GGA3-213ENST00000582486 GTF2A2P52657 109 aa12.33□□□□□ -0.44
GGA3-213ENST00000582486 MARSP56192 900 aaKnown RBP12.33□□□□□ -0.44
GGA3-213ENST00000582486 MTF1Q14872 753 aa12.33□□□□□ -0.44
GGA3-213ENST00000582486 CCL15Q16663 113 aa12.33□□□□□ -0.44
GGA3-213ENST00000582486 TOGARAM2Q6ZUX3 1019 aa12.33□□□□□ -0.44
GGA3-213ENST00000582486 DHX30Q7L2E3 1194 aaKnown RBP eCLIP12.33□□□□□ -0.44
GGA3-213ENST00000582486 C2orf69Q8N8R5 385 aa12.33□□□□□ -0.44
GGA3-213ENST00000582486 FGD4Q96M96 766 aa12.33□□□□□ -0.44
GGA3-213ENST00000582486 TTYH3Q9C0H2 523 aa12.33□□□□□ -0.44
GGA3-213ENST00000582486 PORCNQ9H237 461 aa12.33□□□□□ -0.44
GGA3-213ENST00000582486 GPRC5CQ9NQ84 441 aa12.33□□□□□ -0.44
GGA3-213ENST00000582486 LARSQ9P2J5 1176 aaKnown RBP12.33□□□□□ -0.44
GGA3-213ENST00000582486 CAPN11Q9UMQ6 739 aa12.33□□□□□ -0.44
GGA3-213ENST00000582486 LUC7L2Q9Y383 392 aaKnown RBP12.33□□□□□ -0.44
GGA3-213ENST00000582486 ZMYM2Q9UBW7 1377 aa12.33□□□□□ -0.44
GGA3-213ENST00000582486 STBD1O95210 358 aa12.33□□□□□ -0.44
GGA3-213ENST00000582486 NR3C1P04150 777 aa12.33□□□□□ -0.44
GGA3-213ENST00000582486 MIS18BP1Q6P0N0 1132 aa12.33□□□□□ -0.44
GGA3-213ENST00000582486 NYAP1Q6ZVC0 841 aa12.33□□□□□ -0.44
GGA3-213ENST00000582486 OTUD6AQ7L8S5 288 aa12.33□□□□□ -0.44
GGA3-213ENST00000582486 TRIM59Q8IWR1 403 aa12.33□□□□□ -0.44
GGA3-213ENST00000582486 CCDC155Q8N6L0 562 aa12.33□□□□□ -0.44
GGA3-213ENST00000582486 ZNF526Q8TF50 670 aaPredicted RBP12.33□□□□□ -0.44
GGA3-213ENST00000582486 BRI3BPQ8WY22 251 aa12.33□□□□□ -0.44
GGA3-213ENST00000582486 NUP58Q9BVL2 599 aa12.33□□□□□ -0.44
GGA3-213ENST00000582486 NAA15Q9BXJ9 866 aaKnown RBP12.33□□□□□ -0.44
GGA3-213ENST00000582486 MROH8Q9H579 483 aa12.33□□□□□ -0.44
GGA3-213ENST00000582486 EFCC1Q9HA90 598 aa12.33□□□□□ -0.44
GGA3-213ENST00000582486 AGPAT5Q9NUQ2 364 aa12.33□□□□□ -0.44
GGA3-213ENST00000582486 PCDHB13Q9Y5F0 798 aa12.33□□□□□ -0.44
GGA3-213ENST00000582486 WDR81Q562E7 1941 aa12.32□□□□□ -0.44
GGA3-213ENST00000582486 DNAJC25-GNG10A0A024R161 153 aa12.32□□□□□ -0.44
GGA3-213ENST00000582486 DKC1O60832 514 aaKnown RBP eCLIP12.32□□□□□ -0.44
GGA3-213ENST00000582486 SUPT20HL2P0C7V6 817 aa12.32□□□□□ -0.44
GGA3-213ENST00000582486 PLS3P13797 630 aa12.32□□□□□ -0.44
GGA3-213ENST00000582486 UBA1P22314 1058 aaKnown RBP12.32□□□□□ -0.44
GGA3-213ENST00000582486 PTPN14Q15678 1187 aa12.32□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms