RNA–Protein interactions for RNA: ENST00000582293.1

RNF43-206, Transcript of ring finger protein 43, humanhuman

TSL 2

Gene RNF43, Length 324 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF43-206ENST00000582293 CDC25AP30304 524 aa18.39■□□□□ 0.53
RNF43-206ENST00000582293 BMP8BP34820 402 aa18.39■□□□□ 0.53
RNF43-206ENST00000582293 THPOP40225 353 aa18.39■□□□□ 0.53
RNF43-206ENST00000582293 NPEPPSP55786 919 aa18.39■□□□□ 0.53
RNF43-206ENST00000582293 MGAT3Q09327 533 aa18.39■□□□□ 0.53
RNF43-206ENST00000582293 MKRN4PQ13434 485 aaPredicted RBP18.39■□□□□ 0.53
RNF43-206ENST00000582293 DTHD1Q6ZMT9 781 aa18.39■□□□□ 0.53
RNF43-206ENST00000582293 LRRC8DQ7L1W4 858 aa18.39■□□□□ 0.53
RNF43-206ENST00000582293 TPH2Q8IWU9 490 aa18.39■□□□□ 0.53
RNF43-206ENST00000582293 DNAJB3Q8WWF6 145 aa18.39■□□□□ 0.53
RNF43-206ENST00000582293 TNPO1Q92973 898 aaKnown RBP18.39■□□□□ 0.53
RNF43-206ENST00000582293 LBHD1Q9BQE6 289 aaPredicted RBP18.39■□□□□ 0.53
RNF43-206ENST00000582293 POLR3CQ9BUI4 534 aaPredicted RBP18.39■□□□□ 0.53
RNF43-206ENST00000582293 LRWD1Q9UFC0 647 aa18.39■□□□□ 0.53
RNF43-206ENST00000582293 COLQQ9Y215 455 aaPredicted RBP18.39■□□□□ 0.53
RNF43-206ENST00000582293 RANBP2P49792 3224 aaKnown RBP18.39■□□□□ 0.53
RNF43-206ENST00000582293 IGKV6-21A0A0C4DH24 114 aa18.38■□□□□ 0.53
RNF43-206ENST00000582293 SMIM35A0A1B0GVV1 85 aa18.38■□□□□ 0.53
RNF43-206ENST00000582293 DDX11L8A8MPP1 907 aa18.38■□□□□ 0.53
RNF43-206ENST00000582293 NBNO60934 754 aa18.38■□□□□ 0.53
RNF43-206ENST00000582293 CHRNA1P02708 482 aa18.38■□□□□ 0.53
RNF43-206ENST00000582293 RPA1P27694 616 aa18.38■□□□□ 0.53
RNF43-206ENST00000582293 YWHABP31946 246 aaKnown RBP18.38■□□□□ 0.53
RNF43-206ENST00000582293 NASPP49321 788 aaPredicted RBP18.38■□□□□ 0.53
RNF43-206ENST00000582293 FPGSQ05932 587 aa18.38■□□□□ 0.53
RNF43-206ENST00000582293 TMEM266Q2M3C6 531 aa18.38■□□□□ 0.53
RNF43-206ENST00000582293 TCTN1Q2MV58 587 aa18.38■□□□□ 0.53
RNF43-206ENST00000582293 MTERF2Q49AM1 385 aa18.38■□□□□ 0.53
RNF43-206ENST00000582293 FAM26DQ5JW98 314 aa18.38■□□□□ 0.53
RNF43-206ENST00000582293 TAF2Q6P1X5 1199 aa18.38■□□□□ 0.53
RNF43-206ENST00000582293 KIAA0319LQ8IZA0 1049 aa18.38■□□□□ 0.53
RNF43-206ENST00000582293 TMEM199Q8N511 208 aa18.38■□□□□ 0.53
RNF43-206ENST00000582293 CCDC155Q8N6L0 562 aa18.38■□□□□ 0.53
RNF43-206ENST00000582293 FAM49AQ9H0Q0 323 aaPredicted RBP18.38■□□□□ 0.53
RNF43-206ENST00000582293 TUFT1Q9NNX1 390 aa18.38■□□□□ 0.53
RNF43-206ENST00000582293 CEP131Q9UPN4 1083 aa18.38■□□□□ 0.53
RNF43-206ENST00000582293 VWA3AA6NCI4 1184 aa18.37■□□□□ 0.53
RNF43-206ENST00000582293 CAND2O75155 1236 aa18.37■□□□□ 0.53
RNF43-206ENST00000582293 CTSHP09668 335 aa18.37■□□□□ 0.53
RNF43-206ENST00000582293 ACRP10323 421 aa18.37■□□□□ 0.53
RNF43-206ENST00000582293 CLCN3P51790 818 aa18.37■□□□□ 0.53
RNF43-206ENST00000582293 CEBPZQ03701 1054 aaKnown RBP18.37■□□□□ 0.53
RNF43-206ENST00000582293 DRP2Q13474 957 aa18.37■□□□□ 0.53
RNF43-206ENST00000582293 C9orf50Q5SZB4 431 aa18.37■□□□□ 0.53
RNF43-206ENST00000582293 POTEGQ6S5H5 508 aa18.37■□□□□ 0.53
RNF43-206ENST00000582293 RETREG2Q8NC44 543 aa18.37■□□□□ 0.53
RNF43-206ENST00000582293 CHAMP1Q96JM3 812 aa18.37■□□□□ 0.53
RNF43-206ENST00000582293 CYP26B1Q9NR63 512 aa18.37■□□□□ 0.53
RNF43-206ENST00000582293 TFIP11Q9UBB9 837 aaKnown RBP18.37■□□□□ 0.53
RNF43-206ENST00000582293 FBXO2Q9UK22 296 aaPredicted RBP18.37■□□□□ 0.53
RNF43-206ENST00000582293 MORC2Q9Y6X9 1032 aaPredicted RBP18.37■□□□□ 0.53
RNF43-206ENST00000582293 DKC1O60832 514 aaKnown RBP eCLIP18.36■□□□□ 0.53
RNF43-206ENST00000582293 BMP15O95972 392 aa18.36■□□□□ 0.53
RNF43-206ENST00000582293 CXCL10P02778 98 aa18.36■□□□□ 0.53
RNF43-206ENST00000582293 FOXD4L6Q3SYB3 417 aaPredicted RBP18.36■□□□□ 0.53
RNF43-206ENST00000582293 TMEM240Q5SV17 173 aa18.36■□□□□ 0.53
RNF43-206ENST00000582293 FOXD4L3Q6VB84 417 aaPredicted RBP18.36■□□□□ 0.53
RNF43-206ENST00000582293 LRRC71Q8N4P6 559 aa18.36■□□□□ 0.53
RNF43-206ENST00000582293 TET1Q8NFU7 2136 aa18.36■□□□□ 0.53
RNF43-206ENST00000582293 PIGOQ8TEQ8 1089 aa18.36■□□□□ 0.53
RNF43-206ENST00000582293 EVPLQ92817 2033 aa18.36■□□□□ 0.53
RNF43-206ENST00000582293 BUD13Q9BRD0 619 aaKnown RBP eCLIP18.36■□□□□ 0.531e-13■□□□□ 10.7
RNF43-206ENST00000582293 UBE2OQ9C0C9 1292 aaKnown RBP18.36■□□□□ 0.53
RNF43-206ENST00000582293 IL23AQ9NPF7 189 aa18.36■□□□□ 0.53
RNF43-206ENST00000582293 RSPH10B2B2RC85 870 aa18.35■□□□□ 0.53
RNF43-206ENST00000582293 MAGEB2O15479 319 aa18.35■□□□□ 0.53
RNF43-206ENST00000582293 MAFO75444 373 aaPredicted RBP18.35■□□□□ 0.53
RNF43-206ENST00000582293 RSPH10BP0C881 870 aa18.35■□□□□ 0.53
RNF43-206ENST00000582293 MARCKSP29966 332 aaPredicted RBP18.35■□□□□ 0.53
RNF43-206ENST00000582293 RARRES1P49788 294 aa18.35■□□□□ 0.53
RNF43-206ENST00000582293 TMEM62Q0P6H9 643 aa18.35■□□□□ 0.53
RNF43-206ENST00000582293 PPIGQ13427 754 aaKnown RBP eCLIP18.35■□□□□ 0.532e-8■■□□□ 13.4
RNF43-206ENST00000582293 SLC39A14Q15043 492 aa18.35■□□□□ 0.53
RNF43-206ENST00000582293 SHHQ15465 462 aa18.35■□□□□ 0.53
RNF43-206ENST00000582293 EFCAB12Q6NXP0 572 aa18.35■□□□□ 0.53
RNF43-206ENST00000582293 DEFB128Q7Z7B8 93 aa18.35■□□□□ 0.53
RNF43-206ENST00000582293 LINC00301Q8NCQ3 95 aa18.35■□□□□ 0.53
RNF43-206ENST00000582293 ERMNQ8TAM6 284 aa18.35■□□□□ 0.53
RNF43-206ENST00000582293 SNX29Q8TEQ0 813 aa18.35■□□□□ 0.53
RNF43-206ENST00000582293 LRRC15Q8TF66 581 aa18.35■□□□□ 0.53
RNF43-206ENST00000582293 CEP170P1Q96L14 293 aa18.35■□□□□ 0.53
RNF43-206ENST00000582293 PNMA5Q96PV4 448 aa18.35■□□□□ 0.53
RNF43-206ENST00000582293 DHX33Q9H6R0 707 aaKnown RBP18.35■□□□□ 0.53
RNF43-206ENST00000582293 CDHR5Q9HBB8 845 aa18.35■□□□□ 0.53
RNF43-206ENST00000582293 RFC2P35250 354 aa18.34■□□□□ 0.53
RNF43-206ENST00000582293 CCT6AP40227 531 aaKnown RBP18.34■□□□□ 0.53
RNF43-206ENST00000582293 MRPS6P82932 125 aaKnown RBP18.34■□□□□ 0.53
RNF43-206ENST00000582293 TBC1D8BQ0IIM8 1120 aa18.34■□□□□ 0.53
RNF43-206ENST00000582293 HYIQ5T013 277 aa18.34■□□□□ 0.53
RNF43-206ENST00000582293 HAUS3Q68CZ6 603 aa18.34■□□□□ 0.53
RNF43-206ENST00000582293 USP49Q70CQ1 688 aa18.34■□□□□ 0.53
RNF43-206ENST00000582293 ZNF365Q70YC5 407 aa18.34■□□□□ 0.53
RNF43-206ENST00000582293 KCNK18Q7Z418 384 aa18.34■□□□□ 0.53
RNF43-206ENST00000582293 CLIC6Q96NY7 704 aa18.34■□□□□ 0.53
RNF43-206ENST00000582293 RAB34Q9BZG1 259 aa18.34■□□□□ 0.53
RNF43-206ENST00000582293 XPNPEP1Q9NQW7 623 aa18.34■□□□□ 0.53
RNF43-206ENST00000582293 ANKEF1Q9NU02 776 aa18.34■□□□□ 0.53
RNF43-206ENST00000582293 DAXXQ9UER7 740 aaPredicted RBP18.34■□□□□ 0.53
RNF43-206ENST00000582293 SRPRBQ9Y5M8 271 aaKnown RBP18.34■□□□□ 0.53
RNF43-206ENST00000582293 CDY2AQ9Y6F7 541 aa18.34■□□□□ 0.53
Retrieved 100 of 20,778 RNA–protein pairs in 35.7 ms