RNA–Protein interactions for RNA: ENST00000581979.5

SRSF1-204, Transcript of serine and arginine rich splicing factor 1, humanhuman

TSL 1 (best)

Gene SRSF1, Length 1,720 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRSF1-204ENST00000581979 SMTNL1A8MU46 457 aa14.01□□□□□ -0.17
SRSF1-204ENST00000581979 ZEB2O60315 1214 aa14.01□□□□□ -0.17
SRSF1-204ENST00000581979 TIMP1P01033 207 aa14.01□□□□□ -0.17
SRSF1-204ENST00000581979 BMP6P22004 513 aa14.01□□□□□ -0.17
SRSF1-204ENST00000581979 PTGS1P23219 599 aa14.01□□□□□ -0.17
SRSF1-204ENST00000581979 CCDC173Q0VFZ6 552 aa14.01□□□□□ -0.17
SRSF1-204ENST00000581979 CXCL17Q6UXB2 119 aa14.01□□□□□ -0.17
SRSF1-204ENST00000581979 VSIG10LQ86VR7 867 aa14.01□□□□□ -0.17
SRSF1-204ENST00000581979 CCDC47Q96A33 483 aaKnown RBP14.01□□□□□ -0.17
SRSF1-204ENST00000581979 MPHOSPH6Q99547 160 aaKnown RBP14.01□□□□□ -0.17
SRSF1-204ENST00000581979 RIT2Q99578 217 aa14.01□□□□□ -0.17
SRSF1-204ENST00000581979 C7orf25Q9BPX7 421 aa14.01□□□□□ -0.17
SRSF1-204ENST00000581979 SEZ6LQ9BYH1 1024 aa14.01□□□□□ -0.17
SRSF1-204ENST00000581979 MTMR10Q9NXD2 777 aa14.01□□□□□ -0.17
SRSF1-204ENST00000581979 DDX39AO00148 427 aaKnown RBP14.01□□□□□ -0.17
SRSF1-204ENST00000581979 EML1O00423 815 aa14.01□□□□□ -0.17
SRSF1-204ENST00000581979 RPA1P27694 616 aa14.01□□□□□ -0.17
SRSF1-204ENST00000581979 EPHB4P54760 987 aa14.01□□□□□ -0.17
SRSF1-204ENST00000581979 TPM4P67936 248 aa14.01□□□□□ -0.17
SRSF1-204ENST00000581979 ASIC1P78348 528 aa14.01□□□□□ -0.17
SRSF1-204ENST00000581979 Q7L0L9 218 aa14.01□□□□□ -0.17
SRSF1-204ENST00000581979 KCNK18Q7Z418 384 aa14.01□□□□□ -0.17
SRSF1-204ENST00000581979 CATSPER3Q86XQ3 398 aa14.01□□□□□ -0.17
SRSF1-204ENST00000581979 EIF2AK1Q9BQI3 630 aaKnown RBP14.01□□□□□ -0.17
SRSF1-204ENST00000581979 POLR3CQ9BUI4 534 aaPredicted RBP14.01□□□□□ -0.17
SRSF1-204ENST00000581979 TRIM9Q9C026 710 aa14.01□□□□□ -0.17
SRSF1-204ENST00000581979 UNC45AQ9H3U1 944 aa14.01□□□□□ -0.17
SRSF1-204ENST00000581979 KIAA1217Q5T5P2 1943 aa14□□□□□ -0.17
SRSF1-204ENST00000581979 B4DLN1 442 aa14□□□□□ -0.17
SRSF1-204ENST00000581979 E9PMD0 336 aa14□□□□□ -0.17
SRSF1-204ENST00000581979 CD4P01730 458 aa14□□□□□ -0.17
SRSF1-204ENST00000581979 SSBP05455 408 aaKnown RBP eCLIP14□□□□□ -0.17
SRSF1-204ENST00000581979 CYP4A11Q02928 519 aa14□□□□□ -0.17
SRSF1-204ENST00000581979 FPGSQ05932 587 aa14□□□□□ -0.17
SRSF1-204ENST00000581979 PDE4DQ08499 809 aa14□□□□□ -0.17
SRSF1-204ENST00000581979 KMT5BQ4FZB7 885 aa14□□□□□ -0.17
SRSF1-204ENST00000581979 POTEGQ6S5H5 508 aa14□□□□□ -0.17
SRSF1-204ENST00000581979 GPRASP2Q96D09 838 aa14□□□□□ -0.17
SRSF1-204ENST00000581979 IWS1Q96ST2 819 aa14□□□□□ -0.17
SRSF1-204ENST00000581979 TBC1D22BQ9NU19 505 aa14□□□□□ -0.17
SRSF1-204ENST00000581979 GRIN2DO15399 1336 aa14□□□□□ -0.17
SRSF1-204ENST00000581979 NKRFO15226 690 aaKnown RBP eCLIP13.99□□□□□ -0.17
SRSF1-204ENST00000581979 TLR3O15455 904 aaKnown RBP13.99□□□□□ -0.17
SRSF1-204ENST00000581979 KLRC4O43908 158 aa13.99□□□□□ -0.17
SRSF1-204ENST00000581979 STAM2O75886 525 aa13.99□□□□□ -0.17
SRSF1-204ENST00000581979 SPATA31C1P0DKV0 1188 aa13.99□□□□□ -0.17
SRSF1-204ENST00000581979 ITGA7Q13683 1181 aa13.99□□□□□ -0.17
SRSF1-204ENST00000581979 KCNB1Q14721 858 aa13.99□□□□□ -0.17
SRSF1-204ENST00000581979 EPHA7Q15375 998 aa13.99□□□□□ -0.17
SRSF1-204ENST00000581979 ZNF658Q5TYW1 1059 aaPredicted RBP13.99□□□□□ -0.17
SRSF1-204ENST00000581979 MFSD5Q6N075 450 aa13.99□□□□□ -0.17
SRSF1-204ENST00000581979 MIER3Q7Z3K6 550 aa13.99□□□□□ -0.17
SRSF1-204ENST00000581979 SCFD2Q8WU76 684 aa13.99□□□□□ -0.17
SRSF1-204ENST00000581979 DYDC2Q96IM9 177 aa13.99□□□□□ -0.17
SRSF1-204ENST00000581979 TUFT1Q9NNX1 390 aa13.99□□□□□ -0.17
SRSF1-204ENST00000581979 TCEAL9Q9UHQ7 104 aa13.99□□□□□ -0.17
SRSF1-204ENST00000581979 MYMKA6NI61 221 aa13.98□□□□□ -0.17
SRSF1-204ENST00000581979 IKBKBO14920 756 aa13.98□□□□□ -0.17
SRSF1-204ENST00000581979 MAFGO15525 162 aa13.98□□□□□ -0.17
SRSF1-204ENST00000581979 PLA2G4BP0C869 781 aa13.98□□□□□ -0.17
SRSF1-204ENST00000581979 CPT1AP50416 773 aa13.98□□□□□ -0.17
SRSF1-204ENST00000581979 SMAD3P84022 425 aaKnown RBP13.98□□□□□ -0.17
SRSF1-204ENST00000581979 MYL5Q02045 173 aa13.98□□□□□ -0.17
SRSF1-204ENST00000581979 SEMA3FQ13275 785 aa13.98□□□□□ -0.17
SRSF1-204ENST00000581979 ITGB3BPQ13352 177 aaPredicted RBP13.98□□□□□ -0.17
SRSF1-204ENST00000581979 CTTNQ14247 550 aaKnown RBP13.98□□□□□ -0.17
SRSF1-204ENST00000581979 STXBP2Q15833 593 aa13.98□□□□□ -0.17
SRSF1-204ENST00000581979 GNPTABQ3T906 1256 aa13.98□□□□□ -0.17
SRSF1-204ENST00000581979 CT47A1Q5JQC4 288 aaPredicted RBP13.98□□□□□ -0.17
SRSF1-204ENST00000581979 DYMQ7RTS9 669 aa13.98□□□□□ -0.17
SRSF1-204ENST00000581979 SMYD4Q8IYR2 804 aaPredicted RBP13.98□□□□□ -0.17
SRSF1-204ENST00000581979 INPP4AQ96PE3 977 aaPredicted RBP13.98□□□□□ -0.17
SRSF1-204ENST00000581979 BMP2KQ9NSY1 1161 aaPredicted RBP13.98□□□□□ -0.17
SRSF1-204ENST00000581979 EXOC1Q9NV70 894 aa13.98□□□□□ -0.17
SRSF1-204ENST00000581979 RGL1Q9NZL6 768 aa13.98□□□□□ -0.17
SRSF1-204ENST00000581979 DNM3Q9UQ16 869 aa13.98□□□□□ -0.17
SRSF1-204ENST00000581979 DHX15O43143 795 aaKnown RBP13.98□□□□□ -0.17
SRSF1-204ENST00000581979 ADCY5O95622 1261 aa13.98□□□□□ -0.17
SRSF1-204ENST00000581979 B3GNT9Q6UX72 402 aa13.98□□□□□ -0.17
SRSF1-204ENST00000581979 TPH2Q8IWU9 490 aa13.98□□□□□ -0.17
SRSF1-204ENST00000581979 KCTD17Q8N5Z5 321 aa13.98□□□□□ -0.17
SRSF1-204ENST00000581979 NEK9Q8TD19 979 aa13.98□□□□□ -0.17
SRSF1-204ENST00000581979 CDHR1Q96JP9 859 aa13.98□□□□□ -0.17
SRSF1-204ENST00000581979 HSD17B14Q9BPX1 270 aa13.98□□□□□ -0.17
SRSF1-204ENST00000581979 STXBP5LQ9Y2K9 1186 aa13.98□□□□□ -0.17
SRSF1-204ENST00000581979 SAMM50Q9Y512 469 aa13.98□□□□□ -0.17
SRSF1-204ENST00000581979 LOXHD1Q8IVV2 1947 aa13.98□□□□□ -0.17
SRSF1-204ENST00000581979 ATP9AO75110 1047 aa13.97□□□□□ -0.17
SRSF1-204ENST00000581979 SLITRK3O94933 977 aa13.97□□□□□ -0.17
SRSF1-204ENST00000581979 RHOBTB3O94955 611 aa13.97□□□□□ -0.17
SRSF1-204ENST00000581979 MUTP22033 750 aa13.97□□□□□ -0.17
SRSF1-204ENST00000581979 ERCC5P28715 1186 aaPredicted RBP13.97□□□□□ -0.17
SRSF1-204ENST00000581979 PURAQ00577 322 aaKnown RBP13.97□□□□□ -0.17
SRSF1-204ENST00000581979 KLHL10Q6JEL2 608 aa13.97□□□□□ -0.17
SRSF1-204ENST00000581979 UNC13DQ70J99 1090 aa13.97□□□□□ -0.17
SRSF1-204ENST00000581979 DDX12PQ92771 950 aa13.97□□□□□ -0.17
SRSF1-204ENST00000581979 RNPC3Q96LT9 517 aaKnown RBP13.97□□□□□ -0.17
SRSF1-204ENST00000581979 PPP1R9BQ96SB3 815 aa13.97□□□□□ -0.17
SRSF1-204ENST00000581979 GDAQ9Y2T3 454 aa13.97□□□□□ -0.17
SRSF1-204ENST00000581979 DOCK5Q9H7D0 1870 aa13.96□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 33.5 ms