RNA–Protein interactions for RNA: ENST00000581849.1

CASC3-207, Transcript of CASC3, exon junction complex subunit, humanhuman

TSL 2

Gene CASC3, Length 580 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CASC3-207ENST00000581849 FIBCD1Q8N539 461 aa25.28■■□□□ 1.64
CASC3-207ENST00000581849 ADAMTS19Q8TE59 1207 aa25.28■■□□□ 1.64
CASC3-207ENST00000581849 TBCKQ8TEA7 893 aa25.28■■□□□ 1.64
CASC3-207ENST00000581849 SLC5A5Q92911 643 aa25.28■■□□□ 1.64
CASC3-207ENST00000581849 HLA-CQ95604 372 aa25.28■■□□□ 1.64
CASC3-207ENST00000581849 PADI3Q9ULW8 664 aa25.28■■□□□ 1.64
CASC3-207ENST00000581849 ADGRA3Q8IWK6 1321 aa25.28■■□□□ 1.64
CASC3-207ENST00000581849 STK36Q9NRP7 1315 aa25.28■■□□□ 1.64
CASC3-207ENST00000581849 TMEM62Q0P6H9 643 aa25.27■■□□□ 1.64
CASC3-207ENST00000581849 ANKRD1Q15327 319 aa25.27■■□□□ 1.64
CASC3-207ENST00000581849 NPY5RQ15761 445 aa25.27■■□□□ 1.64
CASC3-207ENST00000581849 ZNF710Q8N1W2 664 aa25.27■■□□□ 1.64
CASC3-207ENST00000581849 RDM1Q8NG50 284 aa25.27■■□□□ 1.64
CASC3-207ENST00000581849 ZNF689Q96CS4 500 aaPredicted RBP25.27■■□□□ 1.64
CASC3-207ENST00000581849 MRPL38Q96DV4 380 aaKnown RBP25.27■■□□□ 1.64
CASC3-207ENST00000581849 GABBR1Q9UBS5 961 aa25.27■■□□□ 1.64
CASC3-207ENST00000581849 SAMM50Q9Y512 469 aa25.27■■□□□ 1.64
CASC3-207ENST00000581849 EVPLQ92817 2033 aa25.27■■□□□ 1.64
CASC3-207ENST00000581849 C5orf67F2Z3F1 127 aa25.26■■□□□ 1.63
CASC3-207ENST00000581849 TNFRSF10AO00220 468 aa25.26■■□□□ 1.63
CASC3-207ENST00000581849 MAGEB2O15479 319 aa25.26■■□□□ 1.63
CASC3-207ENST00000581849 GAS7O60861 476 aa25.26■■□□□ 1.63
CASC3-207ENST00000581849 C22orf31O95567 290 aa25.26■■□□□ 1.63
CASC3-207ENST00000581849 RB1P06400 928 aa25.26■■□□□ 1.63
CASC3-207ENST00000581849 BMP1P13497 986 aa25.26■■□□□ 1.63
CASC3-207ENST00000581849 JAK3P52333 1124 aa25.26■■□□□ 1.63
CASC3-207ENST00000581849 SCRN1Q12765 414 aa25.26■■□□□ 1.63
CASC3-207ENST00000581849 STK3Q13188 491 aa25.26■■□□□ 1.63
CASC3-207ENST00000581849 CRIPAKQ8N1N5 446 aa25.26■■□□□ 1.63
CASC3-207ENST00000581849 LINC01599Q8WXQ3 324 aa25.26■■□□□ 1.63
CASC3-207ENST00000581849 MBOAT7Q96N66 472 aa25.26■■□□□ 1.63
CASC3-207ENST00000581849 UIMC1Q96RL1 719 aa25.26■■□□□ 1.63
CASC3-207ENST00000581849 LARP6Q9BRS8 491 aaKnown RBP25.26■■□□□ 1.63
CASC3-207ENST00000581849 TEKT3Q9BXF9 490 aa25.26■■□□□ 1.63
CASC3-207ENST00000581849 SLKQ9H2G2 1235 aaPredicted RBP25.26■■□□□ 1.63
CASC3-207ENST00000581849 DISC1Q9NRI5 854 aa25.26■■□□□ 1.63
CASC3-207ENST00000581849 PFKFB2O60825 505 aa25.25■■□□□ 1.63
CASC3-207ENST00000581849 DGKIO75912 1065 aa25.25■■□□□ 1.63
CASC3-207ENST00000581849 TFF2Q03403 129 aa25.25■■□□□ 1.63
CASC3-207ENST00000581849 TIGD5Q53EQ6 642 aa25.25■■□□□ 1.63
CASC3-207ENST00000581849 LRCH2Q5VUJ6 765 aa25.25■■□□□ 1.63
CASC3-207ENST00000581849 KRT25Q7Z3Z0 450 aa25.25■■□□□ 1.63
CASC3-207ENST00000581849 NPAS4Q8IUM7 802 aa25.25■■□□□ 1.63
CASC3-207ENST00000581849 CLP1Q92989 425 aaKnown RBP25.25■■□□□ 1.63
CASC3-207ENST00000581849 STAG3L1P0CL83 205 aa25.24■■□□□ 1.63
CASC3-207ENST00000581849 XBP1P17861 261 aa25.24■■□□□ 1.63
CASC3-207ENST00000581849 GPM6BQ13491 265 aa25.24■■□□□ 1.63
CASC3-207ENST00000581849 NONOQ15233 471 aaKnown RBP eCLIP25.24■■□□□ 1.63
CASC3-207ENST00000581849 RTN4RL1Q86UN2 441 aaPredicted RBP25.24■■□□□ 1.63
CASC3-207ENST00000581849 UHRF1Q96T88 793 aaPredicted RBP25.24■■□□□ 1.63
CASC3-207ENST00000581849 ERVK-5Q9HDB9 667 aa25.24■■□□□ 1.63
CASC3-207ENST00000581849 RNF216Q9NWF9 866 aaPredicted RBP25.24■■□□□ 1.63
CASC3-207ENST00000581849 BRWD1Q9NSI6 2320 aa25.24■■□□□ 1.63
CASC3-207ENST00000581849 PSMD10O75832 226 aa25.23■■□□□ 1.63
CASC3-207ENST00000581849 LINC00271P0C7V0 271 aa25.23■■□□□ 1.63
CASC3-207ENST00000581849 CMTR2Q8IYT2 770 aaKnown RBP25.23■■□□□ 1.63
CASC3-207ENST00000581849 AIFM3Q96NN9 605 aa25.23■■□□□ 1.63
CASC3-207ENST00000581849 PHF20Q9BVI0 1012 aa25.23■■□□□ 1.63
CASC3-207ENST00000581849 LMAN2LQ9H0V9 348 aa25.23■■□□□ 1.63
CASC3-207ENST00000581849 NRBP2Q9NSY0 501 aa25.23■■□□□ 1.63
CASC3-207ENST00000581849 TPCN1Q9ULQ1 816 aa25.23■■□□□ 1.63
CASC3-207ENST00000581849 RPS6KA5O75582 802 aa25.22■■□□□ 1.63
CASC3-207ENST00000581849 OATP04181 439 aa25.22■■□□□ 1.63
CASC3-207ENST00000581849 BMPR1AP36894 532 aa25.22■■□□□ 1.63
CASC3-207ENST00000581849 CRYBB1P53674 252 aaPredicted RBP25.22■■□□□ 1.63
CASC3-207ENST00000581849 BTG3Q14201 252 aaPredicted RBP25.22■■□□□ 1.63
CASC3-207ENST00000581849 B3GNT9Q6UX72 402 aa25.22■■□□□ 1.63
CASC3-207ENST00000581849 C11orf84Q9BUA3 381 aaPredicted RBP25.22■■□□□ 1.63
CASC3-207ENST00000581849 PLVAPQ9BX97 442 aa25.22■■□□□ 1.63
CASC3-207ENST00000581849 TMX1Q9H3N1 280 aa25.22■■□□□ 1.63
CASC3-207ENST00000581849 C1orf112Q9NSG2 853 aa25.22■■□□□ 1.63
CASC3-207ENST00000581849 GPR182O15218 404 aa25.21■■□□□ 1.63
CASC3-207ENST00000581849 ZNF862O60290 1169 aa25.21■■□□□ 1.63
CASC3-207ENST00000581849 TDP2O95551 362 aa25.21■■□□□ 1.63
CASC3-207ENST00000581849 TMOD1P28289 359 aa25.21■■□□□ 1.63
CASC3-207ENST00000581849 CTNNB1P35222 781 aa25.21■■□□□ 1.63
CASC3-207ENST00000581849 LINC01465Q8N7H1 131 aa25.21■■□□□ 1.63
CASC3-207ENST00000581849 UNC45AQ9H3U1 944 aa25.21■■□□□ 1.63
CASC3-207ENST00000581849 NOC2LQ9Y3T9 749 aaKnown RBP25.21■■□□□ 1.63
CASC3-207ENST00000581849 XIRP2A4UGR9 3374 aa25.21■■□□□ 1.63
CASC3-207ENST00000581849 SARSP49591 514 aaKnown RBP25.2■■□□□ 1.62
CASC3-207ENST00000581849 KCNQ1P51787 676 aa25.2■■□□□ 1.62
CASC3-207ENST00000581849 PRKCEQ02156 737 aa25.2■■□□□ 1.62
CASC3-207ENST00000581849 NFX1Q12986 1120 aaKnown RBP25.2■■□□□ 1.62
CASC3-207ENST00000581849 METTL13Q8N6R0 699 aa25.2■■□□□ 1.62
CASC3-207ENST00000581849 ETNPPLQ8TBG4 499 aa25.2■■□□□ 1.62
CASC3-207ENST00000581849 TMEM40Q8WWA1 233 aa25.2■■□□□ 1.62
CASC3-207ENST00000581849 WASF1Q92558 559 aa25.2■■□□□ 1.62
CASC3-207ENST00000581849 MAP7D2Q96T17 732 aa25.2■■□□□ 1.62
CASC3-207ENST00000581849 GINS2Q9Y248 185 aa25.2■■□□□ 1.62
CASC3-207ENST00000581849 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP25.19■■□□□ 1.62
CASC3-207ENST00000581849 GPR32O75388 356 aa25.19■■□□□ 1.62
CASC3-207ENST00000581849 GCFC2P16383 781 aaKnown RBP25.19■■□□□ 1.62
CASC3-207ENST00000581849 AK2P54819 239 aa25.19■■□□□ 1.62
CASC3-207ENST00000581849 TMEM266Q2M3C6 531 aa25.19■■□□□ 1.62
CASC3-207ENST00000581849 MIER3Q7Z3K6 550 aa25.19■■□□□ 1.62
CASC3-207ENST00000581849 BANK1Q8NDB2 785 aa25.19■■□□□ 1.62
CASC3-207ENST00000581849 NAP1L4Q99733 375 aaKnown RBP25.19■■□□□ 1.62
CASC3-207ENST00000581849 UBE2ZQ9H832 354 aaPredicted RBP25.19■■□□□ 1.62
CASC3-207ENST00000581849 CDHR5Q9HBB8 845 aa25.19■■□□□ 1.62
Retrieved 100 of 20,778 RNA–protein pairs in 29.3 ms