RNA–Protein interactions for RNA: ENST00000581241.5

CSNK1D-217, Transcript of casein kinase 1 delta, humanhuman

TSL 2

Gene CSNK1D, Length 6,094 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1D-217ENST00000581241 NBPF3Q9H094 633 aa15.58■□□□□ 0.09
CSNK1D-217ENST00000581241 SMYD3Q9H7B4 428 aa15.58■□□□□ 0.09
CSNK1D-217ENST00000581241 AKT3Q9Y243 479 aa15.58■□□□□ 0.09
CSNK1D-217ENST00000581241 ARHGEF5Q12774 1597 aa15.58■□□□□ 0.09
CSNK1D-217ENST00000581241 ATP10AO60312 1499 aa15.58■□□□□ 0.08
CSNK1D-217ENST00000581241 LRRC53A6NM62 1247 aa15.58■□□□□ 0.08
CSNK1D-217ENST00000581241 DRP2Q13474 957 aa15.58■□□□□ 0.08
CSNK1D-217ENST00000581241 DOK7Q18PE1 504 aa15.58■□□□□ 0.08
CSNK1D-217ENST00000581241 PROM2Q8N271 834 aa15.58■□□□□ 0.08
CSNK1D-217ENST00000581241 HIPK4Q8NE63 616 aa15.58■□□□□ 0.08
CSNK1D-217ENST00000581241 SLC12A6Q9UHW9 1150 aa15.58■□□□□ 0.08
CSNK1D-217ENST00000581241 XDHP47989 1333 aa15.58■□□□□ 0.08
CSNK1D-217ENST00000581241 ERVK-7P63135 1459 aa15.58■□□□□ 0.08
CSNK1D-217ENST00000581241 USP27XA6NNY8 438 aa15.58■□□□□ 0.08
CSNK1D-217ENST00000581241 ARHGDIAP52565 204 aa15.58■□□□□ 0.08
CSNK1D-217ENST00000581241 CEP170P1Q96L14 293 aa15.58■□□□□ 0.08
CSNK1D-217ENST00000581241 SUCLA2Q9P2R7 463 aaPredicted RBP15.58■□□□□ 0.08
CSNK1D-217ENST00000581241 KPNA7A9QM74 516 aa15.58■□□□□ 0.08
CSNK1D-217ENST00000581241 PAMP19021 973 aa15.58■□□□□ 0.08
CSNK1D-217ENST00000581241 OCRLQ01968 901 aa15.58■□□□□ 0.08
CSNK1D-217ENST00000581241 ACTN3Q08043 901 aaPredicted RBP15.58■□□□□ 0.08
CSNK1D-217ENST00000581241 UBE2SQ16763 222 aa15.58■□□□□ 0.08
CSNK1D-217ENST00000581241 ADAMTS1Q9UHI8 967 aa15.58■□□□□ 0.08
CSNK1D-217ENST00000581241 DNAJC12Q9UKB3 198 aa15.58■□□□□ 0.08
CSNK1D-217ENST00000581241 LEMD3Q9Y2U8 911 aa15.58■□□□□ 0.08
CSNK1D-217ENST00000581241 ZBTB33Q86T24 672 aa15.57■□□□□ 0.08
CSNK1D-217ENST00000581241 RPAP1Q9BWH6 1393 aaPredicted RBP15.57■□□□□ 0.08
CSNK1D-217ENST00000581241 SLC16A2P36021 539 aa15.57■□□□□ 0.08
CSNK1D-217ENST00000581241 KLC4Q9NSK0 619 aa15.57■□□□□ 0.08
CSNK1D-217ENST00000581241 TFAMQ00059 246 aaKnown RBP15.57■□□□□ 0.08
CSNK1D-217ENST00000581241 FAM149B1Q96BN6 582 aa15.57■□□□□ 0.08
CSNK1D-217ENST00000581241 LRRC37BQ96QE4 947 aa15.57■□□□□ 0.08
CSNK1D-217ENST00000581241 TAF1DQ9H5J8 278 aaPredicted RBP15.57■□□□□ 0.08
CSNK1D-217ENST00000581241 TRPC5Q9UL62 973 aaPredicted RBP15.57■□□□□ 0.08
CSNK1D-217ENST00000581241 GDAQ9Y2T3 454 aa15.57■□□□□ 0.08
CSNK1D-217ENST00000581241 SLC4A7Q9Y6M7 1214 aa15.57■□□□□ 0.08
CSNK1D-217ENST00000581241 GPC5P78333 572 aa15.57■□□□□ 0.08
CSNK1D-217ENST00000581241 MYO1EQ12965 1108 aa15.57■□□□□ 0.08
CSNK1D-217ENST00000581241 CCDC144BQ3MJ40 725 aa15.57■□□□□ 0.08
CSNK1D-217ENST00000581241 HEXIM2Q96MH2 286 aaKnown RBP15.57■□□□□ 0.08
CSNK1D-217ENST00000581241 AIFM3Q96NN9 605 aa15.57■□□□□ 0.08
CSNK1D-217ENST00000581241 TYW5A2RUC4 315 aaKnown RBP15.57■□□□□ 0.08
CSNK1D-217ENST00000581241 FAM47CQ5HY64 1035 aa15.57■□□□□ 0.08
CSNK1D-217ENST00000581241 FAM47EQ6ZV65 393 aa15.57■□□□□ 0.08
CSNK1D-217ENST00000581241 ERICH1Q86X53 443 aa15.57■□□□□ 0.08
CSNK1D-217ENST00000581241 BUD13Q9BRD0 619 aaKnown RBP eCLIP15.57■□□□□ 0.085e-8■■□□□ 13.5
CSNK1D-217ENST00000581241 OSBPL1AQ9BXW6 950 aa15.57■□□□□ 0.08
CSNK1D-217ENST00000581241 L3MBTL1Q9Y468 752 aa15.57■□□□□ 0.08
CSNK1D-217ENST00000581241 PNMA6FA0A0J9YX94 578 aa15.56■□□□□ 0.08
CSNK1D-217ENST00000581241 ZBTB18Q99592 522 aa15.56■□□□□ 0.08
CSNK1D-217ENST00000581241 UBN1Q9NPG3 1134 aa15.56■□□□□ 0.08
CSNK1D-217ENST00000581241 H3BRJ5 948 aa15.56■□□□□ 0.08
CSNK1D-217ENST00000581241 KITP10721 976 aa15.56■□□□□ 0.08
CSNK1D-217ENST00000581241 CD58P19256 250 aa15.56■□□□□ 0.08
CSNK1D-217ENST00000581241 SOX5P35711 763 aa15.56■□□□□ 0.08
CSNK1D-217ENST00000581241 NFRKBQ6P4R8 1299 aa15.56■□□□□ 0.08
CSNK1D-217ENST00000581241 TRIM59Q8IWR1 403 aa15.56■□□□□ 0.08
CSNK1D-217ENST00000581241 ICA1LQ8NDH6 482 aa15.56■□□□□ 0.08
CSNK1D-217ENST00000581241 FAM187AA6NFU0 413 aa15.56■□□□□ 0.08
CSNK1D-217ENST00000581241 PSAPP07602 524 aa15.56■□□□□ 0.08
CSNK1D-217ENST00000581241 ZBTB41Q5SVQ8 909 aa15.56■□□□□ 0.08
CSNK1D-217ENST00000581241 FMR1NBQ8N0W7 255 aaPredicted RBP15.56■□□□□ 0.08
CSNK1D-217ENST00000581241 TRIM49BA6NDI0 452 aa15.56■□□□□ 0.08
CSNK1D-217ENST00000581241 RASSF10A6NK89 507 aa15.56■□□□□ 0.08
CSNK1D-217ENST00000581241 SIRT2Q8IXJ6 389 aa15.56■□□□□ 0.08
CSNK1D-217ENST00000581241 TTC13Q8NBP0 860 aa15.56■□□□□ 0.08
CSNK1D-217ENST00000581241 MAN1A2O60476 641 aa15.56■□□□□ 0.08
CSNK1D-217ENST00000581241 KRT38O76015 456 aa15.56■□□□□ 0.08
CSNK1D-217ENST00000581241 PRR29P0C7W0 189 aa15.56■□□□□ 0.08
CSNK1D-217ENST00000581241 RAD23BP54727 409 aa15.56■□□□□ 0.08
CSNK1D-217ENST00000581241 RAD54LQ92698 747 aa15.56■□□□□ 0.08
CSNK1D-217ENST00000581241 GCOM2Q9BZD3 368 aaPredicted RBP15.56■□□□□ 0.08
CSNK1D-217ENST00000581241 NDE1Q9NXR1 346 aa15.56■□□□□ 0.08
CSNK1D-217ENST00000581241 FAM167BQ9BTA0 163 aa15.55■□□□□ 0.08
CSNK1D-217ENST00000581241 NXF1Q9UBU9 619 aaKnown RBP15.55■□□□□ 0.08
CSNK1D-217ENST00000581241 CFAP74Q9C0B2 1584 aa15.55■□□□□ 0.08
CSNK1D-217ENST00000581241 NCK2O43639 380 aa15.55■□□□□ 0.08
CSNK1D-217ENST00000581241 MKRN3Q13064 507 aaKnown RBP15.55■□□□□ 0.08
CSNK1D-217ENST00000581241 GRAMD1AQ96CP6 724 aa15.55■□□□□ 0.08
CSNK1D-217ENST00000581241 SNX5Q9Y5X3 404 aa15.55■□□□□ 0.08
CSNK1D-217ENST00000581241 ARHGAP10A1A4S6 786 aa15.55■□□□□ 0.08
CSNK1D-217ENST00000581241 KCNA4P22459 653 aa15.55■□□□□ 0.08
CSNK1D-217ENST00000581241 ANO5Q75V66 913 aa15.55■□□□□ 0.08
CSNK1D-217ENST00000581241 KIAA0825Q8IV33 1275 aa15.55■□□□□ 0.08
CSNK1D-217ENST00000581241 RYBPQ8N488 228 aaPredicted RBP15.55■□□□□ 0.08
CSNK1D-217ENST00000581241 SNF8Q96H20 258 aa15.55■□□□□ 0.08
CSNK1D-217ENST00000581241 ANAPC7Q9UJX3 599 aa15.55■□□□□ 0.08
CSNK1D-217ENST00000581241 CCDC195A0A1B0GUA6 201 aa15.55■□□□□ 0.08
CSNK1D-217ENST00000581241 CHRNA3P32297 505 aa15.55■□□□□ 0.08
CSNK1D-217ENST00000581241 NOP14P78316 857 aaKnown RBP15.55■□□□□ 0.08
CSNK1D-217ENST00000581241 SIX6OS1Q8N1H7 587 aa15.55■□□□□ 0.08
CSNK1D-217ENST00000581241 PLEKHG1Q9ULL1 1385 aa15.55■□□□□ 0.08
CSNK1D-217ENST00000581241 SPDYE2BA6NHP3 402 aa15.55■□□□□ 0.08
CSNK1D-217ENST00000581241 SYCE1LA8MT33 242 aa15.55■□□□□ 0.08
CSNK1D-217ENST00000581241 PPEF1O14829 653 aaPredicted RBP15.55■□□□□ 0.08
CSNK1D-217ENST00000581241 GGPS1O95749 300 aa15.55■□□□□ 0.08
CSNK1D-217ENST00000581241 SLC4A1P02730 911 aa15.55■□□□□ 0.08
CSNK1D-217ENST00000581241 SPDYE6P0CI01 402 aa15.55■□□□□ 0.08
CSNK1D-217ENST00000581241 ARFIP2P53365 341 aa15.55■□□□□ 0.08
CSNK1D-217ENST00000581241 COPS2P61201 443 aa15.55■□□□□ 0.08
Retrieved 100 of 20,778 RNA–protein pairs in 20.2 ms