RNA–Protein interactions for RNA: ENST00000581055.1

TOP2A-205, Transcript of DNA topoisomerase II alpha, humanhuman

TSL 4

Gene TOP2A, Length 579 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOP2A-205ENST00000581055 PPME1Q9Y570 386 aa20.3■□□□□ 0.84
TOP2A-205ENST00000581055 STK24Q9Y6E0 443 aa20.3■□□□□ 0.84
TOP2A-205ENST00000581055 STX6O43752 255 aa20.29■□□□□ 0.84
TOP2A-205ENST00000581055 SLITRK3O94933 977 aa20.29■□□□□ 0.84
TOP2A-205ENST00000581055 STBD1O95210 358 aa20.29■□□□□ 0.84
TOP2A-205ENST00000581055 BMP15O95972 392 aa20.29■□□□□ 0.84
TOP2A-205ENST00000581055 FXR2P51116 673 aaKnown RBP eCLIP20.29■□□□□ 0.843e-7■□□□□ 11
TOP2A-205ENST00000581055 CYP4A11Q02928 519 aa20.29■□□□□ 0.84
TOP2A-205ENST00000581055 CTTNQ14247 550 aaKnown RBP20.29■□□□□ 0.84
TOP2A-205ENST00000581055 TARBP2Q15633 366 aaKnown RBP20.29■□□□□ 0.84
TOP2A-205ENST00000581055 FERMT3Q86UX7 667 aa20.29■□□□□ 0.84
TOP2A-205ENST00000581055 EXOC8Q8IYI6 725 aa20.29■□□□□ 0.84
TOP2A-205ENST00000581055 ZNF710Q8N1W2 664 aa20.29■□□□□ 0.84
TOP2A-205ENST00000581055 JPH2Q9BR39 696 aaPredicted RBP20.29■□□□□ 0.84
TOP2A-205ENST00000581055 RANBP2P49792 3224 aaKnown RBP20.29■□□□□ 0.84
TOP2A-205ENST00000581055 POTEMA6NI47 508 aa20.28■□□□□ 0.84
TOP2A-205ENST00000581055 BAIAP3O94812 1187 aa20.28■□□□□ 0.84
TOP2A-205ENST00000581055 LYPLA2O95372 231 aa20.28■□□□□ 0.84
TOP2A-205ENST00000581055 CHRNA1P02708 482 aa20.28■□□□□ 0.84
TOP2A-205ENST00000581055 YWHABP31946 246 aaKnown RBP20.28■□□□□ 0.84
TOP2A-205ENST00000581055 PDIA5Q14554 519 aa20.28■□□□□ 0.84
TOP2A-205ENST00000581055 MBTPS1Q14703 1052 aa20.28■□□□□ 0.84
TOP2A-205ENST00000581055 GPNMBQ14956 572 aa20.28■□□□□ 0.84
TOP2A-205ENST00000581055 MTERF2Q49AM1 385 aa20.28■□□□□ 0.84
TOP2A-205ENST00000581055 RASIP1Q5U651 963 aa20.28■□□□□ 0.84
TOP2A-205ENST00000581055 CNKSR3Q6P9H4 555 aa20.28■□□□□ 0.84
TOP2A-205ENST00000581055 DTHD1Q6ZMT9 781 aa20.28■□□□□ 0.84
TOP2A-205ENST00000581055 ANO5Q75V66 913 aa20.28■□□□□ 0.84
TOP2A-205ENST00000581055 KIAA0319LQ8IZA0 1049 aa20.28■□□□□ 0.84
TOP2A-205ENST00000581055 VWCEQ96DN2 955 aa20.28■□□□□ 0.84
TOP2A-205ENST00000581055 MAP7D2Q96T17 732 aa20.28■□□□□ 0.84
TOP2A-205ENST00000581055 ZSCAN16Q9H4T2 348 aaPredicted RBP20.28■□□□□ 0.84
TOP2A-205ENST00000581055 TUFT1Q9NNX1 390 aa20.28■□□□□ 0.84
TOP2A-205ENST00000581055 MTMR6Q9Y217 621 aa20.28■□□□□ 0.84
TOP2A-205ENST00000581055 ZBBXA8MT70 800 aa20.27■□□□□ 0.84
TOP2A-205ENST00000581055 EFCAB14O75071 495 aa20.27■□□□□ 0.84
TOP2A-205ENST00000581055 DNM2P50570 870 aa20.27■□□□□ 0.84
TOP2A-205ENST00000581055 ATP2C1P98194 919 aaPredicted RBP20.27■□□□□ 0.84
TOP2A-205ENST00000581055 MGAT3Q09327 533 aa20.27■□□□□ 0.84
TOP2A-205ENST00000581055 BECN1Q14457 450 aa20.27■□□□□ 0.84
TOP2A-205ENST00000581055 HAUS3Q68CZ6 603 aa20.27■□□□□ 0.84
TOP2A-205ENST00000581055 EFCAB12Q6NXP0 572 aa20.27■□□□□ 0.84
TOP2A-205ENST00000581055 SEPT8Q92599 483 aa20.27■□□□□ 0.84
TOP2A-205ENST00000581055 CEP170P1Q96L14 293 aa20.27■□□□□ 0.84
TOP2A-205ENST00000581055 CYP26B1Q9NR63 512 aa20.27■□□□□ 0.84
TOP2A-205ENST00000581055 WRAP73Q9P2S5 460 aaPredicted RBP20.27■□□□□ 0.84
TOP2A-205ENST00000581055 LRWD1Q9UFC0 647 aa20.27■□□□□ 0.84
TOP2A-205ENST00000581055 TRPV2Q9Y5S1 764 aa20.27■□□□□ 0.84
TOP2A-205ENST00000581055 CDY2AQ9Y6F7 541 aa20.27■□□□□ 0.84
TOP2A-205ENST00000581055 SLC4A7Q9Y6M7 1214 aa20.27■□□□□ 0.84
TOP2A-205ENST00000581055 HSFX4A0A1B0GTS1 333 aaPredicted RBP20.26■□□□□ 0.83
TOP2A-205ENST00000581055 ABHD14A-ACY1A0A1B0GW23 586 aa20.26■□□□□ 0.83
TOP2A-205ENST00000581055 HSFX3A0A1B0GWH4 333 aaPredicted RBP20.26■□□□□ 0.83
TOP2A-205ENST00000581055 IKBKEQ14164 716 aa20.26■□□□□ 0.83
TOP2A-205ENST00000581055 ARL6IP4Q66PJ3 421 aaKnown RBP20.26■□□□□ 0.83
TOP2A-205ENST00000581055 USP38Q8NB14 1042 aa20.26■□□□□ 0.83
TOP2A-205ENST00000581055 SLC7A3Q8WY07 619 aa20.26■□□□□ 0.83
TOP2A-205ENST00000581055 CCDC43Q96MW1 224 aaKnown RBP20.26■□□□□ 0.83
TOP2A-205ENST00000581055 POLR3CQ9BUI4 534 aaPredicted RBP20.26■□□□□ 0.83
TOP2A-205ENST00000581055 CELF4Q9BZC1 486 aaKnown RBP20.26■□□□□ 0.83
TOP2A-205ENST00000581055 SUGCTQ9HAC7 445 aa20.26■□□□□ 0.83
TOP2A-205ENST00000581055 SQORQ9Y6N5 450 aa20.26■□□□□ 0.83
TOP2A-205ENST00000581055 TMEM150BA6NC51 233 aa20.25■□□□□ 0.83
TOP2A-205ENST00000581055 XRCC6P12956 609 aaKnown RBP eCLIP20.25■□□□□ 0.83
TOP2A-205ENST00000581055 RPA1P27694 616 aa20.25■□□□□ 0.83
TOP2A-205ENST00000581055 RFC5P40937 340 aa20.25■□□□□ 0.83
TOP2A-205ENST00000581055 CDC42EP1Q00587 391 aa20.25■□□□□ 0.83
TOP2A-205ENST00000581055 TMEM62Q0P6H9 643 aa20.25■□□□□ 0.83
TOP2A-205ENST00000581055 RESTQ13127 1097 aa20.25■□□□□ 0.83
TOP2A-205ENST00000581055 PLEKHG4Q58EX7 1191 aa20.25■□□□□ 0.83
TOP2A-205ENST00000581055 PLA2G4FQ68DD2 849 aa20.25■□□□□ 0.83
TOP2A-205ENST00000581055 IGSF22Q8N9C0 903 aa20.25■□□□□ 0.83
TOP2A-205ENST00000581055 APBB2Q92870 758 aa20.25■□□□□ 0.83
TOP2A-205ENST00000581055 ANKEF1Q9NU02 776 aa20.25■□□□□ 0.83
TOP2A-205ENST00000581055 CXXC1Q9P0U4 656 aaPredicted RBP20.25■□□□□ 0.83
TOP2A-205ENST00000581055 AKT3Q9Y243 479 aa20.25■□□□□ 0.83
TOP2A-205ENST00000581055 KDM3AQ9Y4C1 1321 aa20.25■□□□□ 0.83
TOP2A-205ENST00000581055 MAFO75444 373 aaPredicted RBP20.24■□□□□ 0.83
TOP2A-205ENST00000581055 GHRP10912 638 aa20.24■□□□□ 0.83
TOP2A-205ENST00000581055 MUTP22033 750 aa20.24■□□□□ 0.83
TOP2A-205ENST00000581055 KCNJ6P48051 423 aa20.24■□□□□ 0.83
TOP2A-205ENST00000581055 FXR1P51114 621 aaKnown RBP eCLIP20.24■□□□□ 0.83
TOP2A-205ENST00000581055 CLCN3P51790 818 aa20.24■□□□□ 0.83
TOP2A-205ENST00000581055 POLGP54098 1239 aaPredicted RBP20.24■□□□□ 0.83
TOP2A-205ENST00000581055 SMAD3P84022 425 aaKnown RBP20.24■□□□□ 0.83
TOP2A-205ENST00000581055 XKR9Q5GH70 373 aa20.24■□□□□ 0.83
TOP2A-205ENST00000581055 FBXO47Q5MNV8 452 aa20.24■□□□□ 0.83
TOP2A-205ENST00000581055 TSHZ1Q6ZSZ6 1077 aa20.24■□□□□ 0.83
TOP2A-205ENST00000581055 FAM43BQ6ZT52 329 aaPredicted RBP20.24■□□□□ 0.83
TOP2A-205ENST00000581055 CATSPER3Q86XQ3 398 aa20.24■□□□□ 0.83
TOP2A-205ENST00000581055 LRRC71Q8N4P6 559 aa20.24■□□□□ 0.83
TOP2A-205ENST00000581055 LINC01465Q8N7H1 131 aa20.24■□□□□ 0.83
TOP2A-205ENST00000581055 SPRYD3Q8NCJ5 442 aa20.24■□□□□ 0.83
TOP2A-205ENST00000581055 DBF4BQ8NFT6 615 aa20.24■□□□□ 0.83
TOP2A-205ENST00000581055 NACC1Q96RE7 527 aa20.24■□□□□ 0.83
TOP2A-205ENST00000581055 CEP89Q96ST8 783 aa20.24■□□□□ 0.83
TOP2A-205ENST00000581055 IFIH1Q9BYX4 1025 aaKnown RBP20.24■□□□□ 0.83
TOP2A-205ENST00000581055 TRIOBPQ9H2D6 2365 aa20.24■□□□□ 0.83
TOP2A-205ENST00000581055 IGKV6-21A0A0C4DH24 114 aa20.23■□□□□ 0.83
TOP2A-205ENST00000581055 GAS2O43903 313 aaKnown RBP20.23■□□□□ 0.83
Retrieved 100 of 20,778 RNA–protein pairs in 38.1 ms