RNA–Protein interactions for RNA: ENST00000581045.1

CDC42EP4-207, Transcript of CDC42 effector protein 4, humanhuman

TSL 4

Gene CDC42EP4, Length 539 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42EP4-207ENST00000581045 PRPHP41219 470 aa14.61□□□□□ -0.07
CDC42EP4-207ENST00000581045 NPEPPSP55786 919 aa14.61□□□□□ -0.07
CDC42EP4-207ENST00000581045 TRIM71Q2Q1W2 868 aaKnown RBP14.61□□□□□ -0.07
CDC42EP4-207ENST00000581045 POTEGQ6S5H5 508 aa14.61□□□□□ -0.07
CDC42EP4-207ENST00000581045 LRRC8DQ7L1W4 858 aa14.61□□□□□ -0.07
CDC42EP4-207ENST00000581045 LRRC71Q8N4P6 559 aa14.61□□□□□ -0.07
CDC42EP4-207ENST00000581045 NEK9Q8TD19 979 aa14.61□□□□□ -0.07
CDC42EP4-207ENST00000581045 SNX29Q8TEQ0 813 aa14.61□□□□□ -0.07
CDC42EP4-207ENST00000581045 PIGOQ8TEQ8 1089 aa14.61□□□□□ -0.07
CDC42EP4-207ENST00000581045 CCDC43Q96MW1 224 aaKnown RBP14.61□□□□□ -0.07
CDC42EP4-207ENST00000581045 TCHHQ07283 1943 aa14.6□□□□□ -0.07
CDC42EP4-207ENST00000581045 MBLAC1A4D2B0 266 aaPredicted RBP14.6□□□□□ -0.07
CDC42EP4-207ENST00000581045 PITPNM1O00562 1244 aa14.6□□□□□ -0.07
CDC42EP4-207ENST00000581045 C22orf31O95567 290 aa14.6□□□□□ -0.07
CDC42EP4-207ENST00000581045 BMP15O95972 392 aa14.6□□□□□ -0.07
CDC42EP4-207ENST00000581045 IQCF3P0C7M6 154 aa14.6□□□□□ -0.07
CDC42EP4-207ENST00000581045 SPATA31C1P0DKV0 1188 aa14.6□□□□□ -0.07
CDC42EP4-207ENST00000581045 PDIA4P13667 645 aaKnown RBP14.6□□□□□ -0.07
CDC42EP4-207ENST00000581045 CLCN3P51790 818 aa14.6□□□□□ -0.07
CDC42EP4-207ENST00000581045 EPHB4P54760 987 aa14.6□□□□□ -0.07
CDC42EP4-207ENST00000581045 GRIN1Q05586 938 aa14.6□□□□□ -0.07
CDC42EP4-207ENST00000581045 TBC1D8BQ0IIM8 1120 aa14.6□□□□□ -0.07
CDC42EP4-207ENST00000581045 PPIGQ13427 754 aaKnown RBP eCLIP14.6□□□□□ -0.07
CDC42EP4-207ENST00000581045 XKR9Q5GH70 373 aa14.6□□□□□ -0.07
CDC42EP4-207ENST00000581045 HAUS3Q68CZ6 603 aa14.6□□□□□ -0.07
CDC42EP4-207ENST00000581045 TAF2Q6P1X5 1199 aa14.6□□□□□ -0.07
CDC42EP4-207ENST00000581045 ANO5Q75V66 913 aa14.6□□□□□ -0.07
CDC42EP4-207ENST00000581045 RSPH3Q86UC2 560 aa14.6□□□□□ -0.07
CDC42EP4-207ENST00000581045 CATSPER3Q86XQ3 398 aa14.6□□□□□ -0.07
CDC42EP4-207ENST00000581045 C4orf19Q8IY42 314 aa14.6□□□□□ -0.07
CDC42EP4-207ENST00000581045 IGSF22Q8N9C0 903 aa14.6□□□□□ -0.07
CDC42EP4-207ENST00000581045 ZNF579Q8NAF0 562 aaKnown RBP14.6□□□□□ -0.07
CDC42EP4-207ENST00000581045 CEP170P1Q96L14 293 aa14.6□□□□□ -0.07
CDC42EP4-207ENST00000581045 ZNF396Q96N95 335 aaPredicted RBP14.6□□□□□ -0.07
CDC42EP4-207ENST00000581045 GDF15Q99988 308 aa14.6□□□□□ -0.07
CDC42EP4-207ENST00000581045 HSD17B14Q9BPX1 270 aa14.6□□□□□ -0.07
CDC42EP4-207ENST00000581045 SUGCTQ9HAC7 445 aa14.6□□□□□ -0.07
CDC42EP4-207ENST00000581045 PCDHA2Q9Y5H9 948 aa14.6□□□□□ -0.07
CDC42EP4-207ENST00000581045 TET1Q8NFU7 2136 aa14.6□□□□□ -0.07
CDC42EP4-207ENST00000581045 RSPH10B2B2RC85 870 aa14.59□□□□□ -0.07
CDC42EP4-207ENST00000581045 RSPH10BP0C881 870 aa14.59□□□□□ -0.07
CDC42EP4-207ENST00000581045 STK38Q15208 465 aa14.59□□□□□ -0.07
CDC42EP4-207ENST00000581045 PTPAQ15257 358 aa14.59□□□□□ -0.07
CDC42EP4-207ENST00000581045 ARL6IP4Q66PJ3 421 aaKnown RBP14.59□□□□□ -0.07
CDC42EP4-207ENST00000581045 EFCAB12Q6NXP0 572 aa14.59□□□□□ -0.07
CDC42EP4-207ENST00000581045 OTUD6AQ7L8S5 288 aa14.59□□□□□ -0.07
CDC42EP4-207ENST00000581045 ZNF668Q96K58 619 aaPredicted RBP14.59□□□□□ -0.07
CDC42EP4-207ENST00000581045 PLIN2Q99541 437 aa14.59□□□□□ -0.07
CDC42EP4-207ENST00000581045 NIFKQ9BYG3 293 aaKnown RBP14.59□□□□□ -0.07
CDC42EP4-207ENST00000581045 TUFT1Q9NNX1 390 aa14.59□□□□□ -0.07
CDC42EP4-207ENST00000581045 CYP26B1Q9NR63 512 aa14.59□□□□□ -0.07
CDC42EP4-207ENST00000581045 COLQQ9Y215 455 aaPredicted RBP14.59□□□□□ -0.07
CDC42EP4-207ENST00000581045 AKT3Q9Y243 479 aa14.59□□□□□ -0.07
CDC42EP4-207ENST00000581045 GINS2Q9Y248 185 aa14.59□□□□□ -0.07
CDC42EP4-207ENST00000581045 ZDHHC9Q9Y397 364 aa14.59□□□□□ -0.07
CDC42EP4-207ENST00000581045 SMIM35A0A1B0GVV1 85 aa14.58□□□□□ -0.08
CDC42EP4-207ENST00000581045 M0QZ92 97 aa14.58□□□□□ -0.08
CDC42EP4-207ENST00000581045 BRD1O95696 1058 aa14.58□□□□□ -0.08
CDC42EP4-207ENST00000581045 VTNP04004 478 aa14.58□□□□□ -0.08
CDC42EP4-207ENST00000581045 NCLP19338 710 aaKnown RBP14.58□□□□□ -0.08
CDC42EP4-207ENST00000581045 RPA1P27694 616 aa14.58□□□□□ -0.08
CDC42EP4-207ENST00000581045 POLGP54098 1239 aaPredicted RBP14.58□□□□□ -0.08
CDC42EP4-207ENST00000581045 RBL2Q08999 1139 aa14.58□□□□□ -0.08
CDC42EP4-207ENST00000581045 PDIA5Q14554 519 aa14.58□□□□□ -0.08
CDC42EP4-207ENST00000581045 TARBP2Q15633 366 aaKnown RBP14.58□□□□□ -0.08
CDC42EP4-207ENST00000581045 ECM1Q16610 540 aa14.58□□□□□ -0.08
CDC42EP4-207ENST00000581045 SPECC1Q5M775 1068 aa14.58□□□□□ -0.08
CDC42EP4-207ENST00000581045 KRT79Q5XKE5 535 aa14.58□□□□□ -0.08
CDC42EP4-207ENST00000581045 CHAMP1Q96JM3 812 aa14.58□□□□□ -0.08
CDC42EP4-207ENST00000581045 POLR3CQ9BUI4 534 aaPredicted RBP14.58□□□□□ -0.08
CDC42EP4-207ENST00000581045 IL23AQ9NPF7 189 aa14.58□□□□□ -0.08
CDC42EP4-207ENST00000581045 DDX19AQ9NUU7 478 aaKnown RBP14.58□□□□□ -0.08
CDC42EP4-207ENST00000581045 KIAA1024Q9UPX6 916 aa14.58□□□□□ -0.08
CDC42EP4-207ENST00000581045 CDY2AQ9Y6F7 541 aa14.58□□□□□ -0.08
CDC42EP4-207ENST00000581045 MAGEB2O15479 319 aa14.57□□□□□ -0.08
CDC42EP4-207ENST00000581045 CHRNA1P02708 482 aa14.57□□□□□ -0.08
CDC42EP4-207ENST00000581045 MRPS6P82932 125 aaKnown RBP14.57□□□□□ -0.08
CDC42EP4-207ENST00000581045 DNM1Q05193 864 aaKnown RBP14.57□□□□□ -0.08
CDC42EP4-207ENST00000581045 MBTPS1Q14703 1052 aa14.57□□□□□ -0.08
CDC42EP4-207ENST00000581045 C9orf50Q5SZB4 431 aa14.57□□□□□ -0.08
CDC42EP4-207ENST00000581045 TRAF7Q6Q0C0 670 aa14.57□□□□□ -0.08
CDC42EP4-207ENST00000581045 CABP7Q86V35 215 aa14.57□□□□□ -0.08
CDC42EP4-207ENST00000581045 KIAA0319LQ8IZA0 1049 aa14.57□□□□□ -0.08
CDC42EP4-207ENST00000581045 RASSF8Q8NHQ8 419 aa14.57□□□□□ -0.08
CDC42EP4-207ENST00000581045 CDK5RAP3Q96JB5 506 aa14.57□□□□□ -0.08
CDC42EP4-207ENST00000581045 CLIC6Q96NY7 704 aa14.57□□□□□ -0.08
CDC42EP4-207ENST00000581045 MAP7D2Q96T17 732 aa14.57□□□□□ -0.08
CDC42EP4-207ENST00000581045 BUD13Q9BRD0 619 aaKnown RBP eCLIP14.57□□□□□ -0.08
CDC42EP4-207ENST00000581045 OSBPL7Q9BZF2 842 aa14.57□□□□□ -0.08
CDC42EP4-207ENST00000581045 FBXO2Q9UK22 296 aaPredicted RBP14.57□□□□□ -0.08
CDC42EP4-207ENST00000581045 USO1O60763 962 aaKnown RBP14.56□□□□□ -0.08
CDC42EP4-207ENST00000581045 NBNO60934 754 aa14.56□□□□□ -0.08
CDC42EP4-207ENST00000581045 CAND2O75155 1236 aa14.56□□□□□ -0.08
CDC42EP4-207ENST00000581045 LYPLA2O95372 231 aa14.56□□□□□ -0.08
CDC42EP4-207ENST00000581045 GHRP10912 638 aa14.56□□□□□ -0.08
CDC42EP4-207ENST00000581045 TMOD1P28289 359 aa14.56□□□□□ -0.08
CDC42EP4-207ENST00000581045 DRP2Q13474 957 aa14.56□□□□□ -0.08
CDC42EP4-207ENST00000581045 SHHQ15465 462 aa14.56□□□□□ -0.08
CDC42EP4-207ENST00000581045 KIZQ2M2Z5 673 aa14.56□□□□□ -0.08
CDC42EP4-207ENST00000581045 ZNF365Q70YC5 407 aa14.56□□□□□ -0.08
Retrieved 100 of 20,778 RNA–protein pairs in 12.1 ms