RNA–Protein interactions for RNA: ENST00000580315.1

CDC42EP4-205, Transcript of CDC42 effector protein 4, humanhuman

TSL 2

Gene CDC42EP4, Length 1,022 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42EP4-205ENST00000580315 WDR64B1ANS9 1081 aa28.06■■■□□ 2.08
CDC42EP4-205ENST00000580315 GCFC2P16383 781 aaKnown RBP28.06■■■□□ 2.08
CDC42EP4-205ENST00000580315 PLA2G5P39877 138 aa28.06■■■□□ 2.08
CDC42EP4-205ENST00000580315 HTRA4P83105 476 aaPredicted RBP28.06■■■□□ 2.08
CDC42EP4-205ENST00000580315 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP28.05■■■□□ 2.08
CDC42EP4-205ENST00000580315 MBLAC1A4D2B0 266 aaPredicted RBP28.05■■■□□ 2.08
CDC42EP4-205ENST00000580315 MMP1P03956 469 aa28.05■■■□□ 2.08
CDC42EP4-205ENST00000580315 RPLP2P05387 115 aaKnown RBP28.05■■■□□ 2.08
CDC42EP4-205ENST00000580315 HMGN5P82970 282 aaKnown RBP28.05■■■□□ 2.08
CDC42EP4-205ENST00000580315 FBXO22Q8NEZ5 403 aa28.05■■■□□ 2.08
CDC42EP4-205ENST00000580315 SP7Q8TDD2 431 aaPredicted RBP28.05■■■□□ 2.08
CDC42EP4-205ENST00000580315 ATP8B4Q8TF62 1192 aa28.05■■■□□ 2.08
CDC42EP4-205ENST00000580315 UBE2ZQ9H832 354 aaPredicted RBP28.05■■■□□ 2.08
CDC42EP4-205ENST00000580315 HBP1O60381 514 aa28.04■■■□□ 2.08
CDC42EP4-205ENST00000580315 CTSHP09668 335 aa28.04■■■□□ 2.08
CDC42EP4-205ENST00000580315 SFNP31947 248 aa28.04■■■□□ 2.08
CDC42EP4-205ENST00000580315 JAK3P52333 1124 aa28.04■■■□□ 2.08
CDC42EP4-205ENST00000580315 FOSBP53539 338 aa28.04■■■□□ 2.08
CDC42EP4-205ENST00000580315 PPP4R3AQ6IN85 833 aa28.04■■■□□ 2.08
CDC42EP4-205ENST00000580315 RPAINQ86UA6 219 aa28.04■■■□□ 2.08
CDC42EP4-205ENST00000580315 CKAP2LQ8IYA6 745 aa28.04■■■□□ 2.08
CDC42EP4-205ENST00000580315 KHSRPQ92945 711 aaKnown RBP eCLIP28.04■■■□□ 2.08
CDC42EP4-205ENST00000580315 LRFN3Q9BTN0 628 aa28.04■■■□□ 2.08
CDC42EP4-205ENST00000580315 OSBPL7Q9BZF2 842 aa28.04■■■□□ 2.08
CDC42EP4-205ENST00000580315 DISC1Q9NRI5 854 aa28.04■■■□□ 2.08
CDC42EP4-205ENST00000580315 NR5A1Q13285 461 aa28.03■■■□□ 2.08
CDC42EP4-205ENST00000580315 SAFBQ15424 915 aaKnown RBP eCLIP28.03■■■□□ 2.08
CDC42EP4-205ENST00000580315 MARCH8Q5T0T0 291 aa28.03■■■□□ 2.08
CDC42EP4-205ENST00000580315 RUFY4Q6ZNE9 571 aa28.03■■■□□ 2.08
CDC42EP4-205ENST00000580315 DIS3L2Q8IYB7 885 aaKnown RBP28.03■■■□□ 2.08
CDC42EP4-205ENST00000580315 SEPT8Q92599 483 aa28.03■■■□□ 2.08
CDC42EP4-205ENST00000580315 FAM122AQ96E09 287 aa28.03■■■□□ 2.08
CDC42EP4-205ENST00000580315 MAFBQ9Y5Q3 323 aaPredicted RBP28.03■■■□□ 2.08
CDC42EP4-205ENST00000580315 SIP14410 1827 aa28.03■■■□□ 2.08
CDC42EP4-205ENST00000580315 CHMP2AO43633 222 aa28.02■■■□□ 2.08
CDC42EP4-205ENST00000580315 CCNT1O60563 726 aaKnown RBP28.02■■■□□ 2.08
CDC42EP4-205ENST00000580315 PSMD10O75832 226 aa28.02■■■□□ 2.08
CDC42EP4-205ENST00000580315 FAM184AQ8NB25 1140 aa28.02■■■□□ 2.08
CDC42EP4-205ENST00000580315 TBC1D32Q96NH3 1257 aa28.02■■■□□ 2.08
CDC42EP4-205ENST00000580315 CD320Q9NPF0 282 aa28.02■■■□□ 2.08
CDC42EP4-205ENST00000580315 GABBR1Q9UBS5 961 aa28.02■■■□□ 2.08
CDC42EP4-205ENST00000580315 LEXMQ3ZCV2 418 aa28.01■■■□□ 2.07
CDC42EP4-205ENST00000580315 ZNF484Q5JVG2 852 aa28.01■■■□□ 2.07
CDC42EP4-205ENST00000580315 FAM26DQ5JW98 314 aa28.01■■■□□ 2.07
CDC42EP4-205ENST00000580315 TMEM31Q5JXX7 168 aa28.01■■■□□ 2.07
CDC42EP4-205ENST00000580315 RDM1Q8NG50 284 aa28.01■■■□□ 2.07
CDC42EP4-205ENST00000580315 ETNPPLQ8TBG4 499 aa28.01■■■□□ 2.07
CDC42EP4-205ENST00000580315 BBXQ8WY36 941 aaPredicted RBP28.01■■■□□ 2.07
CDC42EP4-205ENST00000580315 TOP1MTQ969P6 601 aa28.01■■■□□ 2.07
CDC42EP4-205ENST00000580315 C8orf76Q96K31 380 aa28.01■■■□□ 2.07
CDC42EP4-205ENST00000580315 UNC45AQ9H3U1 944 aa28.01■■■□□ 2.07
CDC42EP4-205ENST00000580315 COL1A2P08123 1366 aa28■■■□□ 2.07
CDC42EP4-205ENST00000580315 BTBD18B2RXH4 712 aa28■■■□□ 2.07
CDC42EP4-205ENST00000580315 SLC37A4O43826 429 aa28■■■□□ 2.07
CDC42EP4-205ENST00000580315 MARCH6O60337 910 aa28■■■□□ 2.07
CDC42EP4-205ENST00000580315 KCNA5P22460 613 aa28■■■□□ 2.07
CDC42EP4-205ENST00000580315 EPC2Q52LR7 807 aa28■■■□□ 2.07
CDC42EP4-205ENST00000580315 MIER3Q7Z3K6 550 aa28■■■□□ 2.07
CDC42EP4-205ENST00000580315 TRAPPC12Q8WVT3 735 aa28■■■□□ 2.07
CDC42EP4-205ENST00000580315 DNAJB3Q8WWF6 145 aa28■■■□□ 2.07
CDC42EP4-205ENST00000580315 TNFRSF25Q93038 417 aa28■■■□□ 2.07
CDC42EP4-205ENST00000580315 GJA10Q969M2 543 aa28■■■□□ 2.07
CDC42EP4-205ENST00000580315 MRPL38Q96DV4 380 aaKnown RBP28■■■□□ 2.07
CDC42EP4-205ENST00000580315 FAM167AQ96KS9 214 aa28■■■□□ 2.07
CDC42EP4-205ENST00000580315 FAM20AQ96MK3 541 aa28■■■□□ 2.07
CDC42EP4-205ENST00000580315 YME1L1Q96TA2 773 aa28■■■□□ 2.07
CDC42EP4-205ENST00000580315 PCDHA2Q9Y5H9 948 aa28■■■□□ 2.07
CDC42EP4-205ENST00000580315 MICAL3Q7RTP6 2002 aa27.99■■■□□ 2.07
CDC42EP4-205ENST00000580315 EARS2Q5JPH6 523 aaKnown RBP27.99■■■□□ 2.07
CDC42EP4-205ENST00000580315 MTHFD1LQ6UB35 978 aa27.99■■■□□ 2.07
CDC42EP4-205ENST00000580315 GADD45GIP1Q8TAE8 222 aaPredicted RBP27.99■■■□□ 2.07
CDC42EP4-205ENST00000580315 SAMD11Q96NU1 681 aa27.99■■■□□ 2.07
CDC42EP4-205ENST00000580315 FAM49AQ9H0Q0 323 aaPredicted RBP27.99■■■□□ 2.07
CDC42EP4-205ENST00000580315 IGSF9BQ9UPX0 1349 aa27.98■■■□□ 2.07
CDC42EP4-205ENST00000580315 LOC101059915A0A1B0GWI6 518 aaPredicted RBP27.98■■■□□ 2.07
CDC42EP4-205ENST00000580315 TBX3O15119 743 aa27.98■■■□□ 2.07
CDC42EP4-205ENST00000580315 UPP2O95045 317 aa27.98■■■□□ 2.07
CDC42EP4-205ENST00000580315 MCM2P49736 904 aa27.98■■■□□ 2.07
CDC42EP4-205ENST00000580315 PTPROQ16827 1216 aa27.98■■■□□ 2.07
CDC42EP4-205ENST00000580315 KCNMB3Q9NPA1 279 aa27.98■■■□□ 2.07
CDC42EP4-205ENST00000580315 CEP131Q9UPN4 1083 aa27.98■■■□□ 2.07
CDC42EP4-205ENST00000580315 SMIM35A0A1B0GVV1 85 aa27.97■■■□□ 2.07
CDC42EP4-205ENST00000580315 FAM205CA6NFA0 338 aa27.97■■■□□ 2.07
CDC42EP4-205ENST00000580315 M0QZ92 97 aa27.97■■■□□ 2.07
CDC42EP4-205ENST00000580315 ATP4AP20648 1035 aa27.97■■■□□ 2.07
CDC42EP4-205ENST00000580315 GUCY1B3Q02153 619 aa27.97■■■□□ 2.07
CDC42EP4-205ENST00000580315 IER5Q5VY09 327 aa27.97■■■□□ 2.07
CDC42EP4-205ENST00000580315 C11orf16Q9NQ32 467 aa27.97■■■□□ 2.07
CDC42EP4-205ENST00000580315 NRBP2Q9NSY0 501 aa27.97■■■□□ 2.07
CDC42EP4-205ENST00000580315 PI4K2BG5E9Z4 385 aa27.96■■■□□ 2.07
CDC42EP4-205ENST00000580315 H3BNC9 293 aa27.96■■■□□ 2.07
CDC42EP4-205ENST00000580315 GPR37L1O60883 481 aa27.96■■■□□ 2.07
CDC42EP4-205ENST00000580315 BAG4O95429 457 aaKnown RBP27.96■■■□□ 2.07
CDC42EP4-205ENST00000580315 CHRNA1P02708 482 aa27.96■■■□□ 2.07
CDC42EP4-205ENST00000580315 KLRC1P26715 233 aa27.96■■■□□ 2.07
CDC42EP4-205ENST00000580315 MRPS6P82932 125 aaKnown RBP27.96■■■□□ 2.07
CDC42EP4-205ENST00000580315 TRMT1LQ7Z2T5 733 aaKnown RBP27.96■■■□□ 2.07
CDC42EP4-205ENST00000580315 FAM178BQ8IXR5 827 aa27.96■■■□□ 2.07
CDC42EP4-205ENST00000580315 NME8Q8N427 588 aa27.96■■■□□ 2.07
CDC42EP4-205ENST00000580315 APBB2Q92870 758 aa27.96■■■□□ 2.07
Retrieved 100 of 20,778 RNA–protein pairs in 40.5 ms