RNA–Protein interactions for RNA: ENST00000579658.5

CDH19-204, Transcript of cadherin 19, humanhuman

TSL 1 (best)

Gene CDH19, Length 2,588 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH19-204ENST00000579658 RSPH10BP0C881 870 aa3.9□□□□□ -1.78
CDH19-204ENST00000579658 MCCP23508 829 aa3.9□□□□□ -1.78
CDH19-204ENST00000579658 ALDH5A1P51649 535 aaPredicted RBP3.9□□□□□ -1.78
CDH19-204ENST00000579658 DLX2Q07687 328 aaPredicted RBP3.9□□□□□ -1.78
CDH19-204ENST00000579658 SEC23AQ15436 765 aa3.9□□□□□ -1.78
CDH19-204ENST00000579658 DGKDQ16760 1214 aa3.9□□□□□ -1.78
CDH19-204ENST00000579658 MB21D2Q8IYB1 491 aaPredicted RBP3.9□□□□□ -1.78
CDH19-204ENST00000579658 CPXCR1Q8N123 301 aa3.9□□□□□ -1.78
CDH19-204ENST00000579658 ZNF687Q8N1G0 1237 aa3.9□□□□□ -1.78
CDH19-204ENST00000579658 NETO1Q8TDF5 533 aa3.9□□□□□ -1.78
CDH19-204ENST00000579658 DHX38Q92620 1227 aaKnown RBP3.9□□□□□ -1.78
CDH19-204ENST00000579658 CASP10Q92851 521 aa3.9□□□□□ -1.78
CDH19-204ENST00000579658 TNPO1Q92973 898 aaKnown RBP3.9□□□□□ -1.78
CDH19-204ENST00000579658 RPGRIP1Q96KN7 1286 aa3.9□□□□□ -1.78
CDH19-204ENST00000579658 TRERF1Q96PN7 1200 aa3.9□□□□□ -1.78
CDH19-204ENST00000579658 MYL10Q9BUA6 226 aa3.9□□□□□ -1.78
CDH19-204ENST00000579658 IGFLR1Q9H665 355 aa3.9□□□□□ -1.78
CDH19-204ENST00000579658 RAVER2Q9HCJ3 691 aaKnown RBP3.9□□□□□ -1.78
CDH19-204ENST00000579658 DZANK1Q9NVP4 752 aa3.9□□□□□ -1.78
CDH19-204ENST00000579658 CYP39A1Q9NYL5 469 aa3.9□□□□□ -1.78
CDH19-204ENST00000579658 GABBR1Q9UBS5 961 aa3.9□□□□□ -1.78
CDH19-204ENST00000579658 STX8Q9UNK0 236 aa3.9□□□□□ -1.78
CDH19-204ENST00000579658 LZTS1Q9Y250 596 aa3.9□□□□□ -1.78
CDH19-204ENST00000579658 DENND4AQ7Z401 1863 aa3.9□□□□□ -1.79
CDH19-204ENST00000579658 PLIN4Q96Q06 1357 aa3.9□□□□□ -1.79
CDH19-204ENST00000579658 FRMPD2Q68DX3 1309 aaPredicted RBP3.9□□□□□ -1.79
CDH19-204ENST00000579658 F5H6K3 240 aa3.9□□□□□ -1.79
CDH19-204ENST00000579658 GRM6O15303 877 aa3.9□□□□□ -1.79
CDH19-204ENST00000579658 TBC1D4O60343 1298 aa3.9□□□□□ -1.79
CDH19-204ENST00000579658 TTLL1O95922 423 aa3.9□□□□□ -1.79
CDH19-204ENST00000579658 OATP04181 439 aa3.9□□□□□ -1.79
CDH19-204ENST00000579658 SLC3A2P08195 630 aaKnown RBP3.9□□□□□ -1.79
CDH19-204ENST00000579658 GOLGA8HP0CJ92 632 aa3.9□□□□□ -1.79
CDH19-204ENST00000579658 STAG3L1P0CL83 205 aa3.9□□□□□ -1.79
CDH19-204ENST00000579658 GNAT1P11488 350 aa3.9□□□□□ -1.79
CDH19-204ENST00000579658 RXRAP19793 462 aa3.9□□□□□ -1.79
CDH19-204ENST00000579658 HSPA4P34932 840 aa3.9□□□□□ -1.79
CDH19-204ENST00000579658 SLC16A2P36021 539 aa3.9□□□□□ -1.79
CDH19-204ENST00000579658 NOVP48745 357 aa3.9□□□□□ -1.79
CDH19-204ENST00000579658 PSEN2P49810 448 aa3.9□□□□□ -1.79
CDH19-204ENST00000579658 STAT2P52630 851 aa3.9□□□□□ -1.79
CDH19-204ENST00000579658 ATXN1P54253 815 aaKnown RBP3.9□□□□□ -1.79
CDH19-204ENST00000579658 CNTN2Q02246 1040 aa3.9□□□□□ -1.79
CDH19-204ENST00000579658 KLRC3Q07444 240 aa3.9□□□□□ -1.79
CDH19-204ENST00000579658 TBC1D8BQ0IIM8 1120 aa3.9□□□□□ -1.79
CDH19-204ENST00000579658 DUSP6Q16828 381 aa3.9□□□□□ -1.79
CDH19-204ENST00000579658 FAM26DQ5JW98 314 aa3.9□□□□□ -1.79
CDH19-204ENST00000579658 GDF6Q6KF10 455 aaPredicted RBP3.9□□□□□ -1.79
CDH19-204ENST00000579658 CES5AQ6NT32 575 aa3.9□□□□□ -1.79
CDH19-204ENST00000579658 ANKRD54Q6NXT1 300 aa3.9□□□□□ -1.79
CDH19-204ENST00000579658 FAM117BQ6P1L5 589 aa3.9□□□□□ -1.79
CDH19-204ENST00000579658 LIN28BQ6ZN17 250 aaKnown RBP eCLIP3.9□□□□□ -1.79
CDH19-204ENST00000579658 RUFY4Q6ZNE9 571 aa3.9□□□□□ -1.79
CDH19-204ENST00000579658 KCTD1Q719H9 257 aa3.9□□□□□ -1.79
CDH19-204ENST00000579658 DEPDC4Q8N2C3 294 aa3.9□□□□□ -1.79
CDH19-204ENST00000579658 ENAHQ8N8S7 591 aaPredicted RBP3.9□□□□□ -1.79
CDH19-204ENST00000579658 TDRD5Q8NAT2 981 aaKnown RBP3.9□□□□□ -1.79
CDH19-204ENST00000579658 FAM174AQ8TBP5 190 aa3.9□□□□□ -1.79
CDH19-204ENST00000579658 IGDCC4Q8TDY8 1250 aa3.9□□□□□ -1.79
CDH19-204ENST00000579658 GMCL1Q96IK5 515 aa3.9□□□□□ -1.79
CDH19-204ENST00000579658 IFIH1Q9BYX4 1025 aaKnown RBP3.9□□□□□ -1.79
CDH19-204ENST00000579658 PANK2Q9BZ23 570 aa3.9□□□□□ -1.79
CDH19-204ENST00000579658 GRPEL1Q9HAV7 217 aa3.9□□□□□ -1.79
CDH19-204ENST00000579658 RC3H2Q9HBD1 1191 aaKnown RBP3.9□□□□□ -1.79
CDH19-204ENST00000579658 PRM3Q9NNZ6 103 aa3.9□□□□□ -1.79
CDH19-204ENST00000579658 NCDNQ9UBB6 729 aa3.9□□□□□ -1.79
CDH19-204ENST00000579658 ANGPTL2Q9UKU9 493 aa3.9□□□□□ -1.79
CDH19-204ENST00000579658 PLAGL2Q9UPG8 496 aa3.9□□□□□ -1.79
CDH19-204ENST00000579658 MYH7BA7E2Y1 1941 aa3.9□□□□□ -1.79
CDH19-204ENST00000579658 KIAA1217Q5T5P2 1943 aa3.89□□□□□ -1.79
CDH19-204ENST00000579658 HAS3O00219 553 aa3.89□□□□□ -1.79
CDH19-204ENST00000579658 PROS1P07225 676 aa3.89□□□□□ -1.79
CDH19-204ENST00000579658 MMP3P08254 477 aa3.89□□□□□ -1.79
CDH19-204ENST00000579658 BMP3P12645 472 aa3.89□□□□□ -1.79
CDH19-204ENST00000579658 EDNRBP24530 442 aa3.89□□□□□ -1.79
CDH19-204ENST00000579658 ERCC5P28715 1186 aaPredicted RBP3.89□□□□□ -1.79
CDH19-204ENST00000579658 SLC35G1Q2M3R5 365 aa3.89□□□□□ -1.79
CDH19-204ENST00000579658 ZNF618Q5T7W0 954 aa3.89□□□□□ -1.79
CDH19-204ENST00000579658 SLFN13Q68D06 897 aa3.89□□□□□ -1.79
CDH19-204ENST00000579658 CWF19L1Q69YN2 538 aaKnown RBP3.89□□□□□ -1.79
CDH19-204ENST00000579658 KCNV1Q6PIU1 500 aa3.89□□□□□ -1.79
CDH19-204ENST00000579658 CASC1Q6TDU7 716 aa3.89□□□□□ -1.79
CDH19-204ENST00000579658 SERINC5Q86VE9 423 aa3.89□□□□□ -1.79
CDH19-204ENST00000579658 STAG2Q8N3U4 1231 aa3.89□□□□□ -1.79
CDH19-204ENST00000579658 DBF4BQ8NFT6 615 aa3.89□□□□□ -1.79
CDH19-204ENST00000579658 NCOA7Q8NI08 942 aa3.89□□□□□ -1.79
CDH19-204ENST00000579658 PIK3R5Q8WYR1 880 aa3.89□□□□□ -1.79
CDH19-204ENST00000579658 ESR2Q92731 530 aa3.89□□□□□ -1.79
CDH19-204ENST00000579658 KCNB2Q92953 911 aa3.89□□□□□ -1.79
CDH19-204ENST00000579658 NXPE3Q969Y0 559 aa3.89□□□□□ -1.79
CDH19-204ENST00000579658 KIFC2Q96AC6 838 aa3.89□□□□□ -1.79
CDH19-204ENST00000579658 ZNF689Q96CS4 500 aaPredicted RBP3.89□□□□□ -1.79
CDH19-204ENST00000579658 GBP4Q96PP9 640 aa3.89□□□□□ -1.79
CDH19-204ENST00000579658 ZSCAN10Q96SZ4 725 aaPredicted RBP3.89□□□□□ -1.79
CDH19-204ENST00000579658 GPR20Q99678 358 aa3.89□□□□□ -1.79
CDH19-204ENST00000579658 UBA5Q9GZZ9 404 aa3.89□□□□□ -1.79
CDH19-204ENST00000579658 TLE6Q9H808 572 aa3.89□□□□□ -1.79
CDH19-204ENST00000579658 PDGFCQ9NRA1 345 aa3.89□□□□□ -1.79
CDH19-204ENST00000579658 TCP11L1Q9NUJ3 509 aa3.89□□□□□ -1.79
CDH19-204ENST00000579658 FBXO4Q9UKT5 387 aa3.89□□□□□ -1.79
Retrieved 100 of 20,778 RNA–protein pairs in 84.3 ms