RNA–Protein interactions for RNA: ENST00000579605.5

CDK5RAP3-213, Transcript of CDK5 regulatory subunit associated protein 3, humanhuman

TSL 4

Gene CDK5RAP3, Length 560 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP3-213ENST00000579605 RRN3P2A6NIE6 340 aa15.2■□□□□ 0.02
CDK5RAP3-213ENST00000579605 STAM2O75886 525 aa15.2■□□□□ 0.02
CDK5RAP3-213ENST00000579605 PCP11498 1178 aaKnown RBP15.2■□□□□ 0.02
CDK5RAP3-213ENST00000579605 PDE4AP27815 886 aa15.2■□□□□ 0.02
CDK5RAP3-213ENST00000579605 KRT76Q01546 638 aa15.2■□□□□ 0.02
CDK5RAP3-213ENST00000579605 KCNT2Q6UVM3 1135 aa15.2■□□□□ 0.02
CDK5RAP3-213ENST00000579605 ENAHQ8N8S7 591 aaPredicted RBP15.2■□□□□ 0.02
CDK5RAP3-213ENST00000579605 MRPL43Q8N983 215 aaKnown RBP15.2■□□□□ 0.02
CDK5RAP3-213ENST00000579605 FEZF2Q8TBJ5 459 aa15.2■□□□□ 0.02
CDK5RAP3-213ENST00000579605 SEPT1Q8WYJ6 367 aa15.2■□□□□ 0.02
CDK5RAP3-213ENST00000579605 ACSF2Q96CM8 615 aaPredicted RBP15.2■□□□□ 0.02
CDK5RAP3-213ENST00000579605 PIGSQ96S52 555 aa15.2■□□□□ 0.02
CDK5RAP3-213ENST00000579605 SENP7Q9BQF6 1050 aa15.2■□□□□ 0.02
CDK5RAP3-213ENST00000579605 SMARCAD1Q9H4L7 1026 aa15.2■□□□□ 0.02
CDK5RAP3-213ENST00000579605 RALYQ9UKM9 306 aaKnown RBP15.2■□□□□ 0.02
CDK5RAP3-213ENST00000579605 C2orf71A6NGG8 1288 aa15.19■□□□□ 0.02
CDK5RAP3-213ENST00000579605 B4E1Z4 1266 aa15.19■□□□□ 0.02
CDK5RAP3-213ENST00000579605 ZNF213O14771 459 aa15.19■□□□□ 0.02
CDK5RAP3-213ENST00000579605 NARSO43776 548 aaKnown RBP15.19■□□□□ 0.02
CDK5RAP3-213ENST00000579605 ATP9AO75110 1047 aa15.19■□□□□ 0.02
CDK5RAP3-213ENST00000579605 RPS6KA5O75582 802 aa15.19■□□□□ 0.02
CDK5RAP3-213ENST00000579605 CXCL14O95715 111 aa15.19■□□□□ 0.02
CDK5RAP3-213ENST00000579605 CFHP08603 1231 aa15.19■□□□□ 0.02
CDK5RAP3-213ENST00000579605 SMC1AQ14683 1233 aaKnown RBP15.19■□□□□ 0.02
CDK5RAP3-213ENST00000579605 KIAA1841Q6NSI8 718 aa15.19■□□□□ 0.02
CDK5RAP3-213ENST00000579605 TMC5Q6UXY8 1006 aa15.19■□□□□ 0.02
CDK5RAP3-213ENST00000579605 SLC24A5Q71RS6 500 aa15.19■□□□□ 0.02
CDK5RAP3-213ENST00000579605 ZNF589Q86UQ0 364 aaPredicted RBP15.19■□□□□ 0.02
CDK5RAP3-213ENST00000579605 NLRX1Q86UT6 975 aa15.19■□□□□ 0.02
CDK5RAP3-213ENST00000579605 TMEM87AQ8NBN3 555 aa15.19■□□□□ 0.02
CDK5RAP3-213ENST00000579605 CHAMP1Q96JM3 812 aa15.19■□□□□ 0.02
CDK5RAP3-213ENST00000579605 ZNF558Q96NG5 402 aa15.19■□□□□ 0.02
CDK5RAP3-213ENST00000579605 CDHR5Q9HBB8 845 aa15.19■□□□□ 0.02
CDK5RAP3-213ENST00000579605 RGS18Q9NS28 235 aa15.19■□□□□ 0.02
CDK5RAP3-213ENST00000579605 USTQ9Y2C2 406 aa15.19■□□□□ 0.02
CDK5RAP3-213ENST00000579605 NOC2LQ9Y3T9 749 aaKnown RBP15.19■□□□□ 0.02
CDK5RAP3-213ENST00000579605 RPLP2P05387 115 aaKnown RBP15.18■□□□□ 0.02
CDK5RAP3-213ENST00000579605 ATXN1P54253 815 aaKnown RBP15.18■□□□□ 0.02
CDK5RAP3-213ENST00000579605 ZC3H14Q6PJT7 736 aaKnown RBP15.18■□□□□ 0.02
CDK5RAP3-213ENST00000579605 LRRC55Q6ZSA7 311 aa15.18■□□□□ 0.02
CDK5RAP3-213ENST00000579605 GIMAP8Q8ND71 665 aaPredicted RBP15.18■□□□□ 0.02
CDK5RAP3-213ENST00000579605 PIBF1Q8WXW3 757 aa15.18■□□□□ 0.02
CDK5RAP3-213ENST00000579605 MTMR8Q96EF0 704 aa15.18■□□□□ 0.02
CDK5RAP3-213ENST00000579605 KCNK12Q9HB15 430 aa15.18■□□□□ 0.02
CDK5RAP3-213ENST00000579605 C1orf112Q9NSG2 853 aa15.18■□□□□ 0.02
CDK5RAP3-213ENST00000579605 RNF216Q9NWF9 866 aaPredicted RBP15.18■□□□□ 0.02
CDK5RAP3-213ENST00000579605 SPG21Q9NZD8 308 aa15.18■□□□□ 0.02
CDK5RAP3-213ENST00000579605 CA14Q9ULX7 337 aa15.18■□□□□ 0.02
CDK5RAP3-213ENST00000579605 DUSP12Q9UNI6 340 aa15.18■□□□□ 0.02
CDK5RAP3-213ENST00000579605 TPRP12270 2363 aaKnown RBP15.17■□□□□ 0.02
CDK5RAP3-213ENST00000579605 C9IYK1 514 aa15.17■□□□□ 0.02
CDK5RAP3-213ENST00000579605 DCNP07585 359 aaKnown RBP15.17■□□□□ 0.02
CDK5RAP3-213ENST00000579605 SP9P0CG40 484 aa15.17■□□□□ 0.02
CDK5RAP3-213ENST00000579605 EPCAMP16422 314 aa15.17■□□□□ 0.02
CDK5RAP3-213ENST00000579605 MX1P20591 662 aa15.17■□□□□ 0.02
CDK5RAP3-213ENST00000579605 NMIQ13287 307 aaPredicted RBP15.17■□□□□ 0.02
CDK5RAP3-213ENST00000579605 XRRA1Q6P2D8 792 aa15.17■□□□□ 0.02
CDK5RAP3-213ENST00000579605 AUTS2Q8WXX7 1259 aa15.17■□□□□ 0.02
CDK5RAP3-213ENST00000579605 EVI5LQ96CN4 794 aa15.17■□□□□ 0.02
CDK5RAP3-213ENST00000579605 PPP1R16BQ96T49 567 aa15.17■□□□□ 0.02
CDK5RAP3-213ENST00000579605 ZSWIM5Q9P217 1185 aa15.17■□□□□ 0.02
CDK5RAP3-213ENST00000579605 MAD2L2Q9UI95 211 aa15.17■□□□□ 0.02
CDK5RAP3-213ENST00000579605 ST3GAL5Q9UNP4 418 aa15.17■□□□□ 0.02
CDK5RAP3-213ENST00000579605 PCDHA2Q9Y5H9 948 aa15.17■□□□□ 0.02
CDK5RAP3-213ENST00000579605 DCDC2BA2VCK2 349 aa15.16■□□□□ 0.02
CDK5RAP3-213ENST00000579605 KRBA1A5PL33 1030 aa15.16■□□□□ 0.02
CDK5RAP3-213ENST00000579605 SPDYE4A6NLX3 237 aa15.16■□□□□ 0.02
CDK5RAP3-213ENST00000579605 NT5C1B-RDH14C9J2C7 533 aa15.16■□□□□ 0.02
CDK5RAP3-213ENST00000579605 TRAF1Q13077 416 aa15.16■□□□□ 0.02
CDK5RAP3-213ENST00000579605 PLCB4Q15147 1175 aa15.16■□□□□ 0.02
CDK5RAP3-213ENST00000579605 IFIT1BQ5T764 474 aaKnown RBP15.16■□□□□ 0.02
CDK5RAP3-213ENST00000579605 KIAA0319Q5VV43 1072 aa15.16■□□□□ 0.02
CDK5RAP3-213ENST00000579605 RSAD2Q8WXG1 361 aa15.16■□□□□ 0.02
CDK5RAP3-213ENST00000579605 DZANK1Q9NVP4 752 aa15.16■□□□□ 0.02
CDK5RAP3-213ENST00000579605 TMEM161AQ9NX61 479 aa15.16■□□□□ 0.02
CDK5RAP3-213ENST00000579605 NCDNQ9UBB6 729 aa15.16■□□□□ 0.02
CDK5RAP3-213ENST00000579605 ZMYM6O95789 1325 aa15.16■□□□□ 0.02
CDK5RAP3-213ENST00000579605 KCNA2P16389 499 aa15.15■□□□□ 0.02
CDK5RAP3-213ENST00000579605 PPM1AP35813 382 aa15.15■□□□□ 0.02
CDK5RAP3-213ENST00000579605 TBC1D8BQ0IIM8 1120 aa15.15■□□□□ 0.02
CDK5RAP3-213ENST00000579605 SLC35G1Q2M3R5 365 aa15.15■□□□□ 0.02
CDK5RAP3-213ENST00000579605 PCNX4Q63HM2 1172 aa15.15■□□□□ 0.02
CDK5RAP3-213ENST00000579605 USP17L6PQ6QN14 398 aa15.15■□□□□ 0.02
CDK5RAP3-213ENST00000579605 CCDC149Q6ZUS6 474 aa15.15■□□□□ 0.02
CDK5RAP3-213ENST00000579605 OTOP3Q7RTS5 596 aa15.15■□□□□ 0.02
CDK5RAP3-213ENST00000579605 CABP7Q86V35 215 aa15.15■□□□□ 0.02
CDK5RAP3-213ENST00000579605 ABI1Q8IZP0 508 aa15.15■□□□□ 0.02
CDK5RAP3-213ENST00000579605 NME8Q8N427 588 aa15.15■□□□□ 0.02
CDK5RAP3-213ENST00000579605 RNF169Q8NCN4 708 aa15.15■□□□□ 0.02
CDK5RAP3-213ENST00000579605 SMARCC2Q8TAQ2 1214 aa15.15■□□□□ 0.02
CDK5RAP3-213ENST00000579605 TMEM40Q8WWA1 233 aa15.15■□□□□ 0.02
CDK5RAP3-213ENST00000579605 CASD1Q96PB1 797 aa15.15■□□□□ 0.02
CDK5RAP3-213ENST00000579605 PCYT2Q99447 389 aa15.15■□□□□ 0.02
CDK5RAP3-213ENST00000579605 UBAC1Q9BSL1 405 aa15.15■□□□□ 0.02
CDK5RAP3-213ENST00000579605 TMEM117Q9H0C3 514 aa15.15■□□□□ 0.02
CDK5RAP3-213ENST00000579605 FRMPD4Q14CM0 1322 aa15.15■□□□□ 0.02
CDK5RAP3-213ENST00000579605 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP15.14■□□□□ 0.01
CDK5RAP3-213ENST00000579605 SMIM35A0A1B0GVV1 85 aa15.14■□□□□ 0.01
CDK5RAP3-213ENST00000579605 METAP2P50579 478 aaKnown RBP eCLIP15.14■□□□□ 0.01
CDK5RAP3-213ENST00000579605 FAM189BP81408 668 aa15.14■□□□□ 0.01
Retrieved 100 of 20,778 RNA–protein pairs in 37.5 ms