RNA–Protein interactions for RNA: ENST00000579061.5

SS18-212, Transcript of SS18, nBAF chromatin remodeling complex subunit, humanhuman

TSL 3

Gene SS18, Length 646 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SS18-212ENST00000579061 TTC3P53804 2025 aa16.72■□□□□ 0.27
SS18-212ENST00000579061 BTBD18B2RXH4 712 aa16.72■□□□□ 0.27
SS18-212ENST00000579061 CHMP2AO43633 222 aa16.72■□□□□ 0.27
SS18-212ENST00000579061 CCNT1O60563 726 aaKnown RBP16.72■□□□□ 0.27
SS18-212ENST00000579061 C22orf31O95567 290 aa16.72■□□□□ 0.27
SS18-212ENST00000579061 OATP04181 439 aa16.72■□□□□ 0.27
SS18-212ENST00000579061 PRKCEQ02156 737 aa16.72■□□□□ 0.27
SS18-212ENST00000579061 PPP2R5CQ13362 524 aa16.72■□□□□ 0.27
SS18-212ENST00000579061 DIS3L2Q8IYB7 885 aaKnown RBP16.72■□□□□ 0.27
SS18-212ENST00000579061 KIAA0319LQ8IZA0 1049 aa16.72■□□□□ 0.27
SS18-212ENST00000579061 CELF4Q9BZC1 486 aaKnown RBP16.72■□□□□ 0.27
SS18-212ENST00000579061 PRDM12Q9H4Q4 367 aa16.72■□□□□ 0.27
SS18-212ENST00000579061 LOC101059915A0A1B0GWI6 518 aaPredicted RBP16.71■□□□□ 0.27
SS18-212ENST00000579061 ST18O60284 1047 aa16.71■□□□□ 0.27
SS18-212ENST00000579061 HTRA4P83105 476 aaPredicted RBP16.71■□□□□ 0.27
SS18-212ENST00000579061 TAP1Q03518 808 aa16.71■□□□□ 0.27
SS18-212ENST00000579061 SAFBQ15424 915 aaKnown RBP eCLIP16.71■□□□□ 0.27
SS18-212ENST00000579061 UGCGQ16739 394 aa16.71■□□□□ 0.27
SS18-212ENST00000579061 SLFN12Q8IYM2 578 aa16.71■□□□□ 0.27
SS18-212ENST00000579061 MYOCDQ8IZQ8 938 aa16.71■□□□□ 0.27
SS18-212ENST00000579061 ZNF710Q8N1W2 664 aa16.71■□□□□ 0.27
SS18-212ENST00000579061 MAFAQ8NHW3 353 aaPredicted RBP16.71■□□□□ 0.27
SS18-212ENST00000579061 TOP1MTQ969P6 601 aa16.71■□□□□ 0.27
SS18-212ENST00000579061 INSL6Q9Y581 213 aa16.71■□□□□ 0.27
SS18-212ENST00000579061 FAM205CA6NFA0 338 aa16.7■□□□□ 0.26
SS18-212ENST00000579061 DKC1O60832 514 aaKnown RBP eCLIP16.7■□□□□ 0.26
SS18-212ENST00000579061 BAG4O95429 457 aaKnown RBP16.7■□□□□ 0.26
SS18-212ENST00000579061 XKR3Q5GH77 459 aa16.7■□□□□ 0.26
SS18-212ENST00000579061 ODR4Q5SWX8 454 aa16.7■□□□□ 0.26
SS18-212ENST00000579061 TMCO2Q7Z6W1 182 aaPredicted RBP16.7■□□□□ 0.26
SS18-212ENST00000579061 HAS1Q92839 578 aa16.7■□□□□ 0.26
SS18-212ENST00000579061 C8orf76Q96K31 380 aa16.7■□□□□ 0.26
SS18-212ENST00000579061 FTHL17Q9BXU8 183 aa16.7■□□□□ 0.26
SS18-212ENST00000579061 NIFKQ9BYG3 293 aaKnown RBP16.7■□□□□ 0.26
SS18-212ENST00000579061 AGO3Q9H9G7 860 aaKnown RBP16.7■□□□□ 0.26
SS18-212ENST00000579061 VAV3Q9UKW4 847 aa16.7■□□□□ 0.26
SS18-212ENST00000579061 TRANK1O15050 2925 aa16.7■□□□□ 0.26
SS18-212ENST00000579061 COL4A6Q14031 1691 aa16.69■□□□□ 0.26
SS18-212ENST00000579061 MARCH6O60337 910 aa16.69■□□□□ 0.26
SS18-212ENST00000579061 TMOD1P28289 359 aa16.69■□□□□ 0.26
SS18-212ENST00000579061 PSMC5P62195 406 aa16.69■□□□□ 0.26
SS18-212ENST00000579061 TMEM62Q0P6H9 643 aa16.69■□□□□ 0.26
SS18-212ENST00000579061 TARBP2Q15633 366 aaKnown RBP16.69■□□□□ 0.26
SS18-212ENST00000579061 TRMT1LQ7Z2T5 733 aaKnown RBP16.69■□□□□ 0.26
SS18-212ENST00000579061 POTEDQ86YR6 584 aa16.69■□□□□ 0.26
SS18-212ENST00000579061 LINC01465Q8N7H1 131 aa16.69■□□□□ 0.26
SS18-212ENST00000579061 FBXO18Q8NFZ0 1043 aa16.69■□□□□ 0.26
SS18-212ENST00000579061 LCHNA4D1U4 455 aa16.68■□□□□ 0.26
SS18-212ENST00000579061 EML1O00423 815 aa16.68■□□□□ 0.26
SS18-212ENST00000579061 ENPP3O14638 875 aa16.68■□□□□ 0.26
SS18-212ENST00000579061 ARHGEF15O94989 841 aa16.68■□□□□ 0.26
SS18-212ENST00000579061 STBD1O95210 358 aa16.68■□□□□ 0.26
SS18-212ENST00000579061 P4HBP07237 508 aaKnown RBP16.68■□□□□ 0.26
SS18-212ENST00000579061 POU3F3P20264 500 aaPredicted RBP16.68■□□□□ 0.26
SS18-212ENST00000579061 CD52P31358 61 aa16.68■□□□□ 0.26
SS18-212ENST00000579061 FOSBP53539 338 aa16.68■□□□□ 0.26
SS18-212ENST00000579061 PAK2Q13177 524 aa16.68■□□□□ 0.26
SS18-212ENST00000579061 ADGRE1Q14246 886 aa16.68■□□□□ 0.26
SS18-212ENST00000579061 EPHA7Q15375 998 aa16.68■□□□□ 0.26
SS18-212ENST00000579061 EFCAB12Q6NXP0 572 aa16.68■□□□□ 0.26
SS18-212ENST00000579061 METTL13Q8N6R0 699 aa16.68■□□□□ 0.26
SS18-212ENST00000579061 FAM184AQ8NB25 1140 aa16.68■□□□□ 0.26
SS18-212ENST00000579061 SLC17A8Q8NDX2 589 aa16.68■□□□□ 0.26
SS18-212ENST00000579061 SP7Q8TDD2 431 aaPredicted RBP16.68■□□□□ 0.26
SS18-212ENST00000579061 TBC1D32Q96NH3 1257 aa16.68■□□□□ 0.26
SS18-212ENST00000579061 MAP7D2Q96T17 732 aa16.68■□□□□ 0.26
SS18-212ENST00000579061 FOXP1Q9H334 677 aaPredicted RBP16.68■□□□□ 0.26
SS18-212ENST00000579061 PADI3Q9ULW8 664 aa16.68■□□□□ 0.26
SS18-212ENST00000579061 QARSP47897 775 aaKnown RBP16.67■□□□□ 0.26
SS18-212ENST00000579061 MCM2P49736 904 aa16.67■□□□□ 0.26
SS18-212ENST00000579061 CRYBB1P53674 252 aaPredicted RBP16.67■□□□□ 0.26
SS18-212ENST00000579061 ERVK-21P61565 698 aa16.67■□□□□ 0.26
SS18-212ENST00000579061 SPIRE1Q08AE8 756 aa16.67■□□□□ 0.26
SS18-212ENST00000579061 TBC1D8BQ0IIM8 1120 aa16.67■□□□□ 0.26
SS18-212ENST00000579061 FAM117BQ6P1L5 589 aa16.67■□□□□ 0.26
SS18-212ENST00000579061 TGS1Q96RS0 853 aaKnown RBP16.67■□□□□ 0.26
SS18-212ENST00000579061 CEP89Q96ST8 783 aa16.67■□□□□ 0.26
SS18-212ENST00000579061 TSPYL2Q9H2G4 693 aaPredicted RBP16.67■□□□□ 0.26
SS18-212ENST00000579061 SEPT9Q9UHD8 586 aaPredicted RBP16.67■□□□□ 0.26
SS18-212ENST00000579061 KIF3AQ9Y496 699 aa16.67■□□□□ 0.26
SS18-212ENST00000579061 PPME1Q9Y570 386 aa16.67■□□□□ 0.26
SS18-212ENST00000579061 EYSQ5T1H1 3165 aa16.67■□□□□ 0.26
SS18-212ENST00000579061 LINC01553A4QN01 128 aa16.66■□□□□ 0.26
SS18-212ENST00000579061 NEMFO60524 1076 aa16.66■□□□□ 0.26
SS18-212ENST00000579061 GPR32O75388 356 aa16.66■□□□□ 0.26
SS18-212ENST00000579061 RPS6KA5O75582 802 aa16.66■□□□□ 0.26
SS18-212ENST00000579061 CLCN3P51790 818 aa16.66■□□□□ 0.26
SS18-212ENST00000579061 CDC42EP1Q00587 391 aa16.66■□□□□ 0.26
SS18-212ENST00000579061 GUCY1B3Q02153 619 aa16.66■□□□□ 0.26
SS18-212ENST00000579061 ORC2Q13416 577 aaPredicted RBP16.66■□□□□ 0.26
SS18-212ENST00000579061 CALCRLQ16602 461 aa16.66■□□□□ 0.26
SS18-212ENST00000579061 RALGAPA2Q2PPJ7 1873 aa16.66■□□□□ 0.26
SS18-212ENST00000579061 NLRC5Q86WI3 1866 aa16.66■□□□□ 0.26
SS18-212ENST00000579061 BANK1Q8NDB2 785 aa16.66■□□□□ 0.26
SS18-212ENST00000579061 PRUNE2Q8WUY3 3088 aa16.66■□□□□ 0.26
SS18-212ENST00000579061 ARNTL2Q8WYA1 636 aa16.66■□□□□ 0.26
SS18-212ENST00000579061 SAMD11Q96NU1 681 aa16.66■□□□□ 0.26
SS18-212ENST00000579061 YME1L1Q96TA2 773 aa16.66■□□□□ 0.26
SS18-212ENST00000579061 JPH2Q9BR39 696 aaPredicted RBP16.66■□□□□ 0.26
SS18-212ENST00000579061 CDHR5Q9HBB8 845 aa16.66■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 15.8 ms