RNA–Protein interactions for RNA: ENST00000578700.5

SS18-210, Transcript of SS18, nBAF chromatin remodeling complex subunit, humanhuman

TSL 5

Gene SS18, Length 575 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SS18-210ENST00000578700 CAVIN2O95810 425 aa11.43□□□□□ -0.58
SS18-210ENST00000578700 CFBP00751 764 aa11.43□□□□□ -0.58
SS18-210ENST00000578700 RSPH10BP0C881 870 aa11.43□□□□□ -0.58
SS18-210ENST00000578700 TOB1P50616 345 aaPredicted RBP11.43□□□□□ -0.58
SS18-210ENST00000578700 ORC2Q13416 577 aaPredicted RBP11.43□□□□□ -0.58
SS18-210ENST00000578700 GPM6BQ13491 265 aa11.43□□□□□ -0.58
SS18-210ENST00000578700 LAMC2Q13753 1193 aa11.43□□□□□ -0.58
SS18-210ENST00000578700 EPC2Q52LR7 807 aa11.43□□□□□ -0.58
SS18-210ENST00000578700 TCEAL5Q5H9L2 206 aa11.43□□□□□ -0.58
SS18-210ENST00000578700 MCF2L2Q86YR7 1114 aa11.43□□□□□ -0.58
SS18-210ENST00000578700 BANK1Q8NDB2 785 aa11.43□□□□□ -0.58
SS18-210ENST00000578700 TNFRSF25Q93038 417 aa11.43□□□□□ -0.58
SS18-210ENST00000578700 MRPL38Q96DV4 380 aaKnown RBP11.43□□□□□ -0.58
SS18-210ENST00000578700 ZFP91Q96JP5 570 aaPredicted RBP11.43□□□□□ -0.58
SS18-210ENST00000578700 IWS1Q96ST2 819 aa11.43□□□□□ -0.58
SS18-210ENST00000578700 YME1L1Q96TA2 773 aa11.43□□□□□ -0.58
SS18-210ENST00000578700 NAP1L4Q99733 375 aaKnown RBP11.43□□□□□ -0.58
SS18-210ENST00000578700 PYM1Q9BRP8 204 aaKnown RBP11.43□□□□□ -0.58
SS18-210ENST00000578700 AMNQ9BXJ7 453 aa11.43□□□□□ -0.58
SS18-210ENST00000578700 PCDHA6Q9UN73 950 aa11.43□□□□□ -0.58
SS18-210ENST00000578700 PCDHA8Q9Y5H6 950 aa11.43□□□□□ -0.58
SS18-210ENST00000578700 SRPRBQ9Y5M8 271 aaKnown RBP11.43□□□□□ -0.58
SS18-210ENST00000578700 USP34Q70CQ2 3546 aa11.43□□□□□ -0.58
SS18-210ENST00000578700 NLRC5Q86WI3 1866 aa11.42□□□□□ -0.58
SS18-210ENST00000578700 ABCB11O95342 1321 aa11.42□□□□□ -0.58
SS18-210ENST00000578700 LAD1O00515 517 aa11.42□□□□□ -0.58
SS18-210ENST00000578700 DCXO43602 365 aa11.42□□□□□ -0.58
SS18-210ENST00000578700 EIF3JO75822 258 aaKnown RBP11.42□□□□□ -0.58
SS18-210ENST00000578700 NR3C2P08235 984 aa11.42□□□□□ -0.58
SS18-210ENST00000578700 PFKFB1P16118 471 aa11.42□□□□□ -0.58
SS18-210ENST00000578700 TXLNAP40222 546 aa11.42□□□□□ -0.58
SS18-210ENST00000578700 SYKP43405 635 aa11.42□□□□□ -0.58
SS18-210ENST00000578700 RBL2Q08999 1139 aa11.42□□□□□ -0.58
SS18-210ENST00000578700 HIC1Q14526 733 aa11.42□□□□□ -0.58
SS18-210ENST00000578700 MBTPS1Q14703 1052 aa11.42□□□□□ -0.58
SS18-210ENST00000578700 ZNF174Q15697 407 aa11.42□□□□□ -0.58
SS18-210ENST00000578700 SLC35G1Q2M3R5 365 aa11.42□□□□□ -0.58
SS18-210ENST00000578700 TRIM71Q2Q1W2 868 aaKnown RBP11.42□□□□□ -0.58
SS18-210ENST00000578700 PUS10Q3MIT2 529 aaKnown RBP11.42□□□□□ -0.58
SS18-210ENST00000578700 AXDND1Q5T1B0 1012 aaPredicted RBP11.42□□□□□ -0.58
SS18-210ENST00000578700 RESP18Q5W5W9 173 aa11.42□□□□□ -0.58
SS18-210ENST00000578700 TRAF7Q6Q0C0 670 aa11.42□□□□□ -0.58
SS18-210ENST00000578700 FBXO11Q86XK2 927 aa11.42□□□□□ -0.58
SS18-210ENST00000578700 TEX2Q8IWB9 1127 aa11.42□□□□□ -0.58
SS18-210ENST00000578700 FBXL18Q96ME1 805 aa11.42□□□□□ -0.58
SS18-210ENST00000578700 TIGD1Q96MW7 591 aa11.42□□□□□ -0.58
SS18-210ENST00000578700 GOLPH3LQ9H4A5 285 aa11.42□□□□□ -0.58
SS18-210ENST00000578700 RIC8AQ9NPQ8 531 aa11.42□□□□□ -0.58
SS18-210ENST00000578700 CLDND1Q9NY35 253 aa11.42□□□□□ -0.58
SS18-210ENST00000578700 MRPL11Q9Y3B7 192 aaKnown RBP11.42□□□□□ -0.58
SS18-210ENST00000578700 PCDHA1Q9Y5I3 950 aa11.42□□□□□ -0.58
SS18-210ENST00000578700 HAS3O00219 553 aa11.41□□□□□ -0.58
SS18-210ENST00000578700 CTSHP09668 335 aa11.41□□□□□ -0.58
SS18-210ENST00000578700 MCM7P33993 719 aa11.41□□□□□ -0.58
SS18-210ENST00000578700 NDUFA8P51970 172 aa11.41□□□□□ -0.58
SS18-210ENST00000578700 NPY5RQ15761 445 aa11.41□□□□□ -0.58
SS18-210ENST00000578700 CLUL1Q15846 466 aa11.41□□□□□ -0.58
SS18-210ENST00000578700 QRICH1Q2TAL8 776 aa11.41□□□□□ -0.58
SS18-210ENST00000578700 ARL6IP4Q66PJ3 421 aaKnown RBP11.41□□□□□ -0.58
SS18-210ENST00000578700 KANK3Q6NY19 840 aa11.41□□□□□ -0.58
SS18-210ENST00000578700 NEK8Q86SG6 692 aa11.41□□□□□ -0.58
SS18-210ENST00000578700 GAS2L3Q86XJ1 694 aa11.41□□□□□ -0.58
SS18-210ENST00000578700 TMEM192Q8IY95 271 aa11.41□□□□□ -0.58
SS18-210ENST00000578700 FMR1NBQ8N0W7 255 aaPredicted RBP11.41□□□□□ -0.58
SS18-210ENST00000578700 ENGASEQ8NFI3 743 aa11.41□□□□□ -0.58
SS18-210ENST00000578700 PPTC7Q8NI37 304 aa11.41□□□□□ -0.58
SS18-210ENST00000578700 NEK9Q8TD19 979 aa11.41□□□□□ -0.58
SS18-210ENST00000578700 ATP6V0A1Q93050 837 aa11.41□□□□□ -0.58
SS18-210ENST00000578700 MTMR8Q96EF0 704 aa11.41□□□□□ -0.58
SS18-210ENST00000578700 SPATA33Q96N06 139 aa11.41□□□□□ -0.58
SS18-210ENST00000578700 PSTPIP2Q9H939 334 aa11.41□□□□□ -0.58
SS18-210ENST00000578700 PXMP2Q9NR77 195 aa11.41□□□□□ -0.58
SS18-210ENST00000578700 FBXO2Q9UK22 296 aaPredicted RBP11.41□□□□□ -0.58
SS18-210ENST00000578700 KCNH3Q9ULD8 1083 aa11.41□□□□□ -0.58
SS18-210ENST00000578700 MYO7AQ13402 2215 aa11.41□□□□□ -0.58
SS18-210ENST00000578700 ZNF318Q5VUA4 2279 aa11.4□□□□□ -0.58
SS18-210ENST00000578700 C17orf102A2RUQ5 167 aa11.4□□□□□ -0.58
SS18-210ENST00000578700 FAM205CA6NFA0 338 aa11.4□□□□□ -0.58
SS18-210ENST00000578700 H3BNC9 293 aa11.4□□□□□ -0.58
SS18-210ENST00000578700 ZNF202O95125 648 aa11.4□□□□□ -0.58
SS18-210ENST00000578700 GGPS1O95749 300 aa11.4□□□□□ -0.58
SS18-210ENST00000578700 F2P00734 622 aa11.4□□□□□ -0.58
SS18-210ENST00000578700 HTRA4P83105 476 aaPredicted RBP11.4□□□□□ -0.58
SS18-210ENST00000578700 ATP2C1P98194 919 aaPredicted RBP11.4□□□□□ -0.58
SS18-210ENST00000578700 NHLH1Q02575 133 aa11.4□□□□□ -0.58
SS18-210ENST00000578700 PTGDRQ13258 359 aa11.4□□□□□ -0.58
SS18-210ENST00000578700 SNW1Q13573 536 aaKnown RBP11.4□□□□□ -0.58
SS18-210ENST00000578700 INF2Q27J81 1249 aa11.4□□□□□ -0.58
SS18-210ENST00000578700 HSDL1Q3SXM5 330 aa11.4□□□□□ -0.58
SS18-210ENST00000578700 TIGD5Q53EQ6 642 aa11.4□□□□□ -0.58
SS18-210ENST00000578700 TYW1BQ6NUM6 668 aa11.4□□□□□ -0.58
SS18-210ENST00000578700 DTHD1Q6ZMT9 781 aa11.4□□□□□ -0.58
SS18-210ENST00000578700 CKAP2LQ8IYA6 745 aa11.4□□□□□ -0.58
SS18-210ENST00000578700 SEPT8Q92599 483 aa11.4□□□□□ -0.58
SS18-210ENST00000578700 SAMD11Q96NU1 681 aa11.4□□□□□ -0.58
SS18-210ENST00000578700 OSBPL7Q9BZF2 842 aa11.4□□□□□ -0.58
SS18-210ENST00000578700 NAT10Q9H0A0 1025 aaKnown RBP11.4□□□□□ -0.58
SS18-210ENST00000578700 NSUN3Q9H649 340 aaKnown RBP11.4□□□□□ -0.58
SS18-210ENST00000578700 IGFLR1Q9H665 355 aa11.4□□□□□ -0.58
SS18-210ENST00000578700 MLXIPQ9HAP2 919 aa11.4□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 21.8 ms