RNA–Protein interactions for RNA: ENST00000578600.1

PTPRM-208, Transcript of protein tyrosine phosphatase, receptor type M, humanhuman

TSL 2

Gene PTPRM, Length 578 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRM-208ENST00000578600 PTF1AQ7RTS3 328 aa7.05□□□□□ -1.28
PTPRM-208ENST00000578600 NLRP10Q86W26 655 aa7.05□□□□□ -1.28
PTPRM-208ENST00000578600 NXPE1Q8N323 547 aa7.05□□□□□ -1.28
PTPRM-208ENST00000578600 PANK1Q8TE04 598 aa7.05□□□□□ -1.28
PTPRM-208ENST00000578600 FBXW5Q969U6 566 aa7.05□□□□□ -1.28
PTPRM-208ENST00000578600 SMAD5Q99717 465 aaKnown RBP7.05□□□□□ -1.28
PTPRM-208ENST00000578600 CELF4Q9BZC1 486 aaKnown RBP7.05□□□□□ -1.28
PTPRM-208ENST00000578600 PUS7LQ9H0K6 701 aaKnown RBP7.05□□□□□ -1.28
PTPRM-208ENST00000578600 TMEM59LQ9UK28 342 aa7.05□□□□□ -1.28
PTPRM-208ENST00000578600 CCNL1Q9UK58 526 aaPredicted RBP7.05□□□□□ -1.28
PTPRM-208ENST00000578600 ABCC6O95255 1503 aa7.05□□□□□ -1.28
PTPRM-208ENST00000578600 USP47Q96K76 1375 aa7.05□□□□□ -1.28
PTPRM-208ENST00000578600 LMO7Q8WWI1 1683 aa7.04□□□□□ -1.28
PTPRM-208ENST00000578600 ZNF891A8MT65 544 aaPredicted RBP7.04□□□□□ -1.28
PTPRM-208ENST00000578600 NOTOA8MTQ0 251 aa7.04□□□□□ -1.28
PTPRM-208ENST00000578600 FAM47E-STBD1D6RA91 191 aa7.04□□□□□ -1.28
PTPRM-208ENST00000578600 F2P00734 622 aa7.04□□□□□ -1.28
PTPRM-208ENST00000578600 SOD2P04179 222 aa7.04□□□□□ -1.28
PTPRM-208ENST00000578600 SSTR4P31391 388 aa7.04□□□□□ -1.28
PTPRM-208ENST00000578600 GTF2A2P52657 109 aa7.04□□□□□ -1.28
PTPRM-208ENST00000578600 TGFB2P61812 414 aa7.04□□□□□ -1.28
PTPRM-208ENST00000578600 OCRLQ01968 901 aa7.04□□□□□ -1.28
PTPRM-208ENST00000578600 TMEM177Q53S58 311 aa7.04□□□□□ -1.28
PTPRM-208ENST00000578600 C11orf74Q86VG3 221 aa7.04□□□□□ -1.28
PTPRM-208ENST00000578600 ZNF526Q8TF50 670 aaPredicted RBP7.04□□□□□ -1.28
PTPRM-208ENST00000578600 SYTL4Q96C24 671 aaPredicted RBP7.04□□□□□ -1.28
PTPRM-208ENST00000578600 ASIC4Q96FT7 647 aa7.04□□□□□ -1.28
PTPRM-208ENST00000578600 MTA3Q9BTC8 594 aa7.04□□□□□ -1.28
PTPRM-208ENST00000578600 IPPKQ9H8X2 491 aa7.04□□□□□ -1.28
PTPRM-208ENST00000578600 SP110Q9HB58 689 aa7.04□□□□□ -1.28
PTPRM-208ENST00000578600 PAK6Q9NQU5 681 aaPredicted RBP7.04□□□□□ -1.28
PTPRM-208ENST00000578600 ADGRE2Q9UHX3 823 aa7.04□□□□□ -1.28
PTPRM-208ENST00000578600 FAN1Q9Y2M0 1017 aa7.04□□□□□ -1.28
PTPRM-208ENST00000578600 ADCY9O60503 1353 aa7.04□□□□□ -1.28
PTPRM-208ENST00000578600 PEAK1Q9H792 1746 aa7.04□□□□□ -1.28
PTPRM-208ENST00000578600 RGPD8O14715 1765 aaPredicted RBP7.03□□□□□ -1.28
PTPRM-208ENST00000578600 CCDC66A2RUB6 948 aa7.03□□□□□ -1.28
PTPRM-208ENST00000578600 H7BY64 318 aa7.03□□□□□ -1.28
PTPRM-208ENST00000578600 USP2O75604 605 aaPredicted RBP7.03□□□□□ -1.28
PTPRM-208ENST00000578600 FKBP9O95302 570 aa7.03□□□□□ -1.28
PTPRM-208ENST00000578600 GRK2P25098 689 aa7.03□□□□□ -1.28
PTPRM-208ENST00000578600 GRK3P35626 688 aa7.03□□□□□ -1.28
PTPRM-208ENST00000578600 CORO7P57737 925 aa7.03□□□□□ -1.28
PTPRM-208ENST00000578600 RTP1P59025 263 aa7.03□□□□□ -1.28
PTPRM-208ENST00000578600 MTMR1Q13613 665 aa7.03□□□□□ -1.28
PTPRM-208ENST00000578600 HSF5Q4G112 596 aaPredicted RBP7.03□□□□□ -1.28
PTPRM-208ENST00000578600 IQSEC1Q6DN90 963 aa7.03□□□□□ -1.28
PTPRM-208ENST00000578600 SLC23A3Q6PIS1 610 aa7.03□□□□□ -1.28
PTPRM-208ENST00000578600 FKBP9P1Q75LS8 142 aa7.03□□□□□ -1.28
PTPRM-208ENST00000578600 ANKS4BQ8N8V4 417 aa7.03□□□□□ -1.28
PTPRM-208ENST00000578600 CHST14Q8NCH0 376 aa7.03□□□□□ -1.28
PTPRM-208ENST00000578600 PLEKHO2Q8TD55 490 aa7.03□□□□□ -1.28
PTPRM-208ENST00000578600 GPR101Q96P66 508 aaPredicted RBP7.03□□□□□ -1.28
PTPRM-208ENST00000578600 ASPSCR1Q9BZE9 553 aa7.03□□□□□ -1.28
PTPRM-208ENST00000578600 PRDM7Q9NQW5 492 aa7.03□□□□□ -1.28
PTPRM-208ENST00000578600 CATSPERZQ9NTU4 200 aa7.03□□□□□ -1.28
PTPRM-208ENST00000578600 X6R8D5 127 aa7.03□□□□□ -1.28
PTPRM-208ENST00000578600 ANKRD36BQ8N2N9 1353 aa7.03□□□□□ -1.28
PTPRM-208ENST00000578600 TTC21BQ7Z4L5 1316 aa7.02□□□□□ -1.28
PTPRM-208ENST00000578600 PHRF1Q9P1Y6 1649 aaKnown RBP7.02□□□□□ -1.29
PTPRM-208ENST00000578600 CRYBG1Q9Y4K1 1723 aa7.02□□□□□ -1.29
PTPRM-208ENST00000578600 WTIPA6NIX2 430 aaPredicted RBP7.02□□□□□ -1.29
PTPRM-208ENST00000578600 TRAF5O00463 557 aa7.02□□□□□ -1.29
PTPRM-208ENST00000578600 NRDCO43847 1150 aa7.02□□□□□ -1.29
PTPRM-208ENST00000578600 ADAMTS4O75173 837 aa7.02□□□□□ -1.29
PTPRM-208ENST00000578600 ID4P47928 161 aa7.02□□□□□ -1.29
PTPRM-208ENST00000578600 MECP2P51608 486 aaKnown RBP7.02□□□□□ -1.29
PTPRM-208ENST00000578600 RBM10P98175 930 aaKnown RBP7.02□□□□□ -1.29
PTPRM-208ENST00000578600 ATP13A4Q4VNC1 1196 aa7.02□□□□□ -1.29
PTPRM-208ENST00000578600 C16orf59Q7L2K0 433 aa7.02□□□□□ -1.29
PTPRM-208ENST00000578600 OVCH1Q7RTY7 1134 aa7.02□□□□□ -1.29
PTPRM-208ENST00000578600 RAVER1Q8IY67 606 aaKnown RBP7.02□□□□□ -1.29
PTPRM-208ENST00000578600 C2orf69Q8N8R5 385 aa7.02□□□□□ -1.29
PTPRM-208ENST00000578600 SMC1BQ8NDV3 1235 aa7.02□□□□□ -1.29
PTPRM-208ENST00000578600 PDZD8Q8NEN9 1154 aa7.02□□□□□ -1.29
PTPRM-208ENST00000578600 FLCNQ8NFG4 579 aa7.02□□□□□ -1.29
PTPRM-208ENST00000578600 C19orf73Q9NVV2 129 aa7.02□□□□□ -1.29
PTPRM-208ENST00000578600 THG1LQ9NWX6 298 aaKnown RBP7.02□□□□□ -1.29
PTPRM-208ENST00000578600 CLDND1Q9NY35 253 aa7.02□□□□□ -1.29
PTPRM-208ENST00000578600 GULP1Q9UBP9 304 aa7.02□□□□□ -1.29
PTPRM-208ENST00000578600 B4GALT6Q9UBX8 382 aa7.02□□□□□ -1.29
PTPRM-208ENST00000578600 PLEKHG2Q9H7P9 1386 aa7.02□□□□□ -1.29
PTPRM-208ENST00000578600 SLIT3O75094 1523 aa7.01□□□□□ -1.29
PTPRM-208ENST00000578600 LRRC37A3O60309 1634 aa7.01□□□□□ -1.29
PTPRM-208ENST00000578600 EFEMP2O95967 443 aa7.01□□□□□ -1.29
PTPRM-208ENST00000578600 ADCYAP1R1P41586 468 aa7.01□□□□□ -1.29
PTPRM-208ENST00000578600 LSSP48449 732 aa7.01□□□□□ -1.29
PTPRM-208ENST00000578600 NEK2P51955 445 aa7.01□□□□□ -1.29
PTPRM-208ENST00000578600 KPNA1P52294 538 aaPredicted RBP7.01□□□□□ -1.29
PTPRM-208ENST00000578600 DSG1Q02413 1049 aa7.01□□□□□ -1.29
PTPRM-208ENST00000578600 CHRNEQ04844 493 aa7.01□□□□□ -1.29
PTPRM-208ENST00000578600 PPP2R5AQ15172 486 aa7.01□□□□□ -1.29
PTPRM-208ENST00000578600 NR0B2Q15466 257 aa7.01□□□□□ -1.29
PTPRM-208ENST00000578600 CRY1Q16526 586 aa7.01□□□□□ -1.29
PTPRM-208ENST00000578600 CEP128Q6ZU80 1094 aa7.01□□□□□ -1.29
PTPRM-208ENST00000578600 CEP68Q76N32 757 aa7.01□□□□□ -1.29
PTPRM-208ENST00000578600 HDGFL2Q7Z4V5 671 aaPredicted RBP7.01□□□□□ -1.29
PTPRM-208ENST00000578600 COL23A1Q86Y22 540 aaPredicted RBP7.01□□□□□ -1.29
PTPRM-208ENST00000578600 WDR75Q8IWA0 830 aaKnown RBP7.01□□□□□ -1.29
PTPRM-208ENST00000578600 CISD2Q8N5K1 135 aaKnown RBP7.01□□□□□ -1.29
Retrieved 100 of 20,778 RNA–protein pairs in 34.9 ms