RNA–Protein interactions for RNA: ENST00000578044.5

SMARCE1-213, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily e, member 1, humanhuman

TSL 1 (best) BASIC

Gene SMARCE1, Length 1,184 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCE1-213ENST00000578044 PSAPP07602 524 aa16.43■□□□□ 0.22
SMARCE1-213ENST00000578044 STAG3L1P0CL83 205 aa16.43■□□□□ 0.22
SMARCE1-213ENST00000578044 KLRC1P26715 233 aa16.43■□□□□ 0.22
SMARCE1-213ENST00000578044 SFNP31947 248 aa16.43■□□□□ 0.22
SMARCE1-213ENST00000578044 BMPR1AP36894 532 aa16.43■□□□□ 0.22
SMARCE1-213ENST00000578044 ANAPC15P60006 121 aa16.43■□□□□ 0.22
SMARCE1-213ENST00000578044 SKIV2LQ15477 1246 aaKnown RBP16.43■□□□□ 0.22
SMARCE1-213ENST00000578044 LEXMQ3ZCV2 418 aa16.43■□□□□ 0.22
SMARCE1-213ENST00000578044 KRT40Q6A162 431 aa16.43■□□□□ 0.22
SMARCE1-213ENST00000578044 FAM117BQ6P1L5 589 aa16.43■□□□□ 0.22
SMARCE1-213ENST00000578044 KIAA0319LQ8IZA0 1049 aa16.43■□□□□ 0.22
SMARCE1-213ENST00000578044 PHKBQ93100 1093 aa16.43■□□□□ 0.22
SMARCE1-213ENST00000578044 PADI3Q9ULW8 664 aa16.43■□□□□ 0.22
SMARCE1-213ENST00000578044 M0R2N6 131 aa16.42■□□□□ 0.22
SMARCE1-213ENST00000578044 ATP4AP20648 1035 aa16.42■□□□□ 0.22
SMARCE1-213ENST00000578044 IGBP1P78318 339 aa16.42■□□□□ 0.22
SMARCE1-213ENST00000578044 TFF2Q03403 129 aa16.42■□□□□ 0.22
SMARCE1-213ENST00000578044 Q4G0T1 1027 aa16.42■□□□□ 0.22
SMARCE1-213ENST00000578044 MBOAT7Q96N66 472 aa16.42■□□□□ 0.22
SMARCE1-213ENST00000578044 SLC26A6Q9BXS9 759 aa16.42■□□□□ 0.22
SMARCE1-213ENST00000578044 UBE2ZQ9H832 354 aaPredicted RBP16.42■□□□□ 0.22
SMARCE1-213ENST00000578044 C1orf112Q9NSG2 853 aa16.42■□□□□ 0.22
SMARCE1-213ENST00000578044 PCDHA4Q9UN74 947 aa16.42■□□□□ 0.22
SMARCE1-213ENST00000578044 UPP2O95045 317 aa16.41■□□□□ 0.22
SMARCE1-213ENST00000578044 CD52P31358 61 aa16.41■□□□□ 0.22
SMARCE1-213ENST00000578044 JAK3P52333 1124 aa16.41■□□□□ 0.22
SMARCE1-213ENST00000578044 CRYBB1P53674 252 aaPredicted RBP16.41■□□□□ 0.22
SMARCE1-213ENST00000578044 CDC42EP1Q00587 391 aa16.41■□□□□ 0.22
SMARCE1-213ENST00000578044 SSRP1Q08945 709 aaKnown RBP16.41■□□□□ 0.22
SMARCE1-213ENST00000578044 PAK2Q13177 524 aa16.41■□□□□ 0.22
SMARCE1-213ENST00000578044 GPM6BQ13491 265 aa16.41■□□□□ 0.22
SMARCE1-213ENST00000578044 PRR16Q569H4 304 aa16.41■□□□□ 0.22
SMARCE1-213ENST00000578044 SWSAP1Q6NVH7 229 aa16.41■□□□□ 0.22
SMARCE1-213ENST00000578044 RTN4RL1Q86UN2 441 aaPredicted RBP16.41■□□□□ 0.22
SMARCE1-213ENST00000578044 RSPH1Q8WYR4 309 aa16.41■□□□□ 0.22
SMARCE1-213ENST00000578044 SLC5A5Q92911 643 aa16.41■□□□□ 0.22
SMARCE1-213ENST00000578044 FAM49AQ9H0Q0 323 aaPredicted RBP16.41■□□□□ 0.22
SMARCE1-213ENST00000578044 FNDC1Q4ZHG4 1894 aaPredicted RBP16.4■□□□□ 0.22
SMARCE1-213ENST00000578044 CPLX1O14810 134 aa16.4■□□□□ 0.22
SMARCE1-213ENST00000578044 GPR182O15218 404 aa16.4■□□□□ 0.22
SMARCE1-213ENST00000578044 EDIL3O43854 480 aa16.4■□□□□ 0.22
SMARCE1-213ENST00000578044 CDKL5O76039 1030 aa16.4■□□□□ 0.22
SMARCE1-213ENST00000578044 C22orf31O95567 290 aa16.4■□□□□ 0.22
SMARCE1-213ENST00000578044 NEFLP07196 543 aa16.4■□□□□ 0.22
SMARCE1-213ENST00000578044 NLRP5P59047 1200 aa16.4■□□□□ 0.22
SMARCE1-213ENST00000578044 C1QBPQ07021 282 aaKnown RBP16.4■□□□□ 0.22
SMARCE1-213ENST00000578044 B3GNT9Q6UX72 402 aa16.4■□□□□ 0.22
SMARCE1-213ENST00000578044 LINC01465Q8N7H1 131 aa16.4■□□□□ 0.22
SMARCE1-213ENST00000578044 BANK1Q8NDB2 785 aa16.4■□□□□ 0.22
SMARCE1-213ENST00000578044 NEK9Q8TD19 979 aa16.4■□□□□ 0.22
SMARCE1-213ENST00000578044 LINC01599Q8WXQ3 324 aa16.4■□□□□ 0.22
SMARCE1-213ENST00000578044 PABPC5Q96DU9 382 aaKnown RBP16.4■□□□□ 0.22
SMARCE1-213ENST00000578044 NSUN3Q9H649 340 aaKnown RBP16.4■□□□□ 0.22
SMARCE1-213ENST00000578044 ELAC1Q9H777 363 aaKnown RBP16.4■□□□□ 0.22
SMARCE1-213ENST00000578044 ERVK-5Q9HDB9 667 aa16.4■□□□□ 0.22
SMARCE1-213ENST00000578044 VPS54Q9P1Q0 977 aa16.4■□□□□ 0.22
SMARCE1-213ENST00000578044 MTUS1Q9ULD2 1270 aa16.4■□□□□ 0.22
SMARCE1-213ENST00000578044 STK36Q9NRP7 1315 aa16.4■□□□□ 0.22
SMARCE1-213ENST00000578044 ATG2AQ2TAZ0 1938 aa16.39■□□□□ 0.21
SMARCE1-213ENST00000578044 MSH4O15457 936 aa16.39■□□□□ 0.21
SMARCE1-213ENST00000578044 TMOD1P28289 359 aa16.39■□□□□ 0.21
SMARCE1-213ENST00000578044 SARSP49591 514 aaKnown RBP16.39■□□□□ 0.21
SMARCE1-213ENST00000578044 KCNQ1P51787 676 aa16.39■□□□□ 0.21
SMARCE1-213ENST00000578044 BTG3Q14201 252 aaPredicted RBP16.39■□□□□ 0.21
SMARCE1-213ENST00000578044 SLC24A5Q71RS6 500 aa16.39■□□□□ 0.21
SMARCE1-213ENST00000578044 TRAPPC12Q8WVT3 735 aa16.39■□□□□ 0.21
SMARCE1-213ENST00000578044 C1QTNF1Q9BXJ1 281 aa16.39■□□□□ 0.21
SMARCE1-213ENST00000578044 NCOA5Q9HCD5 579 aaKnown RBP16.39■□□□□ 0.21
SMARCE1-213ENST00000578044 DISC1Q9NRI5 854 aa16.39■□□□□ 0.21
SMARCE1-213ENST00000578044 RGS18Q9NS28 235 aa16.39■□□□□ 0.21
SMARCE1-213ENST00000578044 NRBP2Q9NSY0 501 aa16.39■□□□□ 0.21
SMARCE1-213ENST00000578044 ADAMTS3O15072 1205 aa16.38■□□□□ 0.21
SMARCE1-213ENST00000578044 RPS6KA5O75582 802 aa16.38■□□□□ 0.21
SMARCE1-213ENST00000578044 PSMD10O75832 226 aa16.38■□□□□ 0.21
SMARCE1-213ENST00000578044 MMP1P03956 469 aa16.38■□□□□ 0.21
SMARCE1-213ENST00000578044 CCT2P78371 535 aaKnown RBP16.38■□□□□ 0.21
SMARCE1-213ENST00000578044 FAM189BP81408 668 aa16.38■□□□□ 0.21
SMARCE1-213ENST00000578044 ANKRD1Q15327 319 aa16.38■□□□□ 0.21
SMARCE1-213ENST00000578044 NPY5RQ15761 445 aa16.38■□□□□ 0.21
SMARCE1-213ENST00000578044 CTC1Q2NKJ3 1217 aa16.38■□□□□ 0.21
SMARCE1-213ENST00000578044 BLIDQ8IZY5 108 aa16.38■□□□□ 0.21
SMARCE1-213ENST00000578044 TMX1Q9H3N1 280 aa16.38■□□□□ 0.21
SMARCE1-213ENST00000578044 FAM50BQ9Y247 325 aa16.38■□□□□ 0.21
SMARCE1-213ENST00000578044 FSD2A1L4K1 749 aa16.37■□□□□ 0.21
SMARCE1-213ENST00000578044 C9IYK1 514 aa16.37■□□□□ 0.21
SMARCE1-213ENST00000578044 DDX39AO00148 427 aaKnown RBP16.37■□□□□ 0.21
SMARCE1-213ENST00000578044 GAS7O60861 476 aa16.37■□□□□ 0.21
SMARCE1-213ENST00000578044 GPR32O75388 356 aa16.37■□□□□ 0.21
SMARCE1-213ENST00000578044 GCFC2P16383 781 aaKnown RBP16.37■□□□□ 0.21
SMARCE1-213ENST00000578044 XBP1P17861 261 aa16.37■□□□□ 0.21
SMARCE1-213ENST00000578044 CTNNB1P35222 781 aa16.37■□□□□ 0.21
SMARCE1-213ENST00000578044 UBE3AQ05086 875 aa16.37■□□□□ 0.21
SMARCE1-213ENST00000578044 TARBP2Q15633 366 aaKnown RBP16.37■□□□□ 0.21
SMARCE1-213ENST00000578044 CSPP1Q1MSJ5 1256 aa16.37■□□□□ 0.21
SMARCE1-213ENST00000578044 PPP4R3AQ6IN85 833 aa16.37■□□□□ 0.21
SMARCE1-213ENST00000578044 KRT25Q7Z3Z0 450 aa16.37■□□□□ 0.21
SMARCE1-213ENST00000578044 CKAP2LQ8IYA6 745 aa16.37■□□□□ 0.21
SMARCE1-213ENST00000578044 TBCKQ8TEA7 893 aa16.37■□□□□ 0.21
SMARCE1-213ENST00000578044 NAP1L4Q99733 375 aaKnown RBP16.37■□□□□ 0.21
SMARCE1-213ENST00000578044 TEKT3Q9BXF9 490 aa16.37■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 42 ms