RNA–Protein interactions for RNA: ENST00000577686.1

SMARCD2-205, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 2, humanhuman

TSL 3

Gene SMARCD2, Length 394 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCD2-205ENST00000577686 PRRX2Q99811 253 aa16.15■□□□□ 0.18
SMARCD2-205ENST00000577686 TLE6Q9H808 572 aa16.15■□□□□ 0.18
SMARCD2-205ENST00000577686 ATP6V0A4Q9HBG4 840 aa16.15■□□□□ 0.18
SMARCD2-205ENST00000577686 TBC1D22BQ9NU19 505 aa16.15■□□□□ 0.18
SMARCD2-205ENST00000577686 DDX39AO00148 427 aaKnown RBP16.14■□□□□ 0.17
SMARCD2-205ENST00000577686 EYA4O95677 639 aa16.14■□□□□ 0.17
SMARCD2-205ENST00000577686 LAG3P18627 525 aa16.14■□□□□ 0.17
SMARCD2-205ENST00000577686 NRIP1P48552 1158 aa16.14■□□□□ 0.17
SMARCD2-205ENST00000577686 COASYQ13057 564 aa16.14■□□□□ 0.17
SMARCD2-205ENST00000577686 ITGB3BPQ13352 177 aaPredicted RBP16.14■□□□□ 0.17
SMARCD2-205ENST00000577686 SLC24A5Q71RS6 500 aa16.14■□□□□ 0.17
SMARCD2-205ENST00000577686 DHX32Q7L7V1 743 aaKnown RBP16.14■□□□□ 0.17
SMARCD2-205ENST00000577686 RNF135Q8IUD6 432 aa16.14■□□□□ 0.17
SMARCD2-205ENST00000577686 SMAP1Q8IYB5 467 aaPredicted RBP16.14■□□□□ 0.17
SMARCD2-205ENST00000577686 THNSL1Q8IYQ7 743 aa16.14■□□□□ 0.17
SMARCD2-205ENST00000577686 FAM167AQ96KS9 214 aa16.14■□□□□ 0.17
SMARCD2-205ENST00000577686 MAP7D2Q96T17 732 aa16.14■□□□□ 0.17
SMARCD2-205ENST00000577686 C6orf50Q9HD87 102 aa16.14■□□□□ 0.17
SMARCD2-205ENST00000577686 ERVK-5Q9HDB9 667 aa16.14■□□□□ 0.17
SMARCD2-205ENST00000577686 TLR9Q9NR96 1032 aa16.14■□□□□ 0.17
SMARCD2-205ENST00000577686 PUF60Q9UHX1 559 aaKnown RBP16.14■□□□□ 0.17
SMARCD2-205ENST00000577686 MUTYHQ9UIF7 546 aa16.14■□□□□ 0.17
SMARCD2-205ENST00000577686 NAP1L2Q9ULW6 460 aaPredicted RBP16.14■□□□□ 0.17
SMARCD2-205ENST00000577686 V9GY48 417 aaPredicted RBP16.14■□□□□ 0.17
SMARCD2-205ENST00000577686 TTC3P53804 2025 aa16.14■□□□□ 0.17
SMARCD2-205ENST00000577686 IGKV6D-21A0A0A0MT36 114 aa16.13■□□□□ 0.17
SMARCD2-205ENST00000577686 TBKBP1A7MCY6 615 aa16.13■□□□□ 0.17
SMARCD2-205ENST00000577686 IPO5O00410 1097 aaKnown RBP16.13■□□□□ 0.17
SMARCD2-205ENST00000577686 TMOD1P28289 359 aa16.13■□□□□ 0.17
SMARCD2-205ENST00000577686 CRYBB1P53674 252 aaPredicted RBP16.13■□□□□ 0.17
SMARCD2-205ENST00000577686 DLX2Q07687 328 aaPredicted RBP16.13■□□□□ 0.17
SMARCD2-205ENST00000577686 ZNF746Q6NUN9 644 aaPredicted RBP16.13■□□□□ 0.17
SMARCD2-205ENST00000577686 ABHD15Q6UXT9 468 aa16.13■□□□□ 0.17
SMARCD2-205ENST00000577686 RTN4RL1Q86UN2 441 aaPredicted RBP16.13■□□□□ 0.17
SMARCD2-205ENST00000577686 SUGP1Q8IWZ8 645 aaKnown RBP16.13■□□□□ 0.17
SMARCD2-205ENST00000577686 CRIPAKQ8N1N5 446 aa16.13■□□□□ 0.17
SMARCD2-205ENST00000577686 SMRP1Q8NCR6 262 aa16.13■□□□□ 0.17
SMARCD2-205ENST00000577686 CYP2W1Q8TAV3 490 aa16.13■□□□□ 0.17
SMARCD2-205ENST00000577686 BBXQ8WY36 941 aaPredicted RBP16.13■□□□□ 0.17
SMARCD2-205ENST00000577686 EDAQ92838 391 aa16.13■□□□□ 0.17
SMARCD2-205ENST00000577686 ZBTB10Q96DT7 871 aa16.13■□□□□ 0.17
SMARCD2-205ENST00000577686 PGBD1Q96JS3 809 aa16.13■□□□□ 0.17
SMARCD2-205ENST00000577686 MSLNLQ96KJ4 702 aa16.13■□□□□ 0.17
SMARCD2-205ENST00000577686 ADAM2Q99965 735 aa16.13■□□□□ 0.17
SMARCD2-205ENST00000577686 ZNF577Q9BSK1 485 aa16.13■□□□□ 0.17
SMARCD2-205ENST00000577686 RGS18Q9NS28 235 aa16.13■□□□□ 0.17
SMARCD2-205ENST00000577686 TMEM161AQ9NX61 479 aa16.13■□□□□ 0.17
SMARCD2-205ENST00000577686 KLF18A0A0U1RQI7 1052 aa16.12■□□□□ 0.17
SMARCD2-205ENST00000577686 MAGEB2O15479 319 aa16.12■□□□□ 0.17
SMARCD2-205ENST00000577686 LINC01565O15544 149 aa16.12■□□□□ 0.17
SMARCD2-205ENST00000577686 PSAPP07602 524 aa16.12■□□□□ 0.17
SMARCD2-205ENST00000577686 GNA11P29992 359 aa16.12■□□□□ 0.17
SMARCD2-205ENST00000577686 GTF2F1P35269 517 aaKnown RBP eCLIP16.12■□□□□ 0.17
SMARCD2-205ENST00000577686 PPM1AP35813 382 aa16.12■□□□□ 0.17
SMARCD2-205ENST00000577686 AKAP17AQ02040 695 aaKnown RBP16.12■□□□□ 0.17
SMARCD2-205ENST00000577686 TMEM266Q2M3C6 531 aa16.12■□□□□ 0.17
SMARCD2-205ENST00000577686 ALYREFQ86V81 257 aaKnown RBP16.12■□□□□ 0.17
SMARCD2-205ENST00000577686 ABI1Q8IZP0 508 aa16.12■□□□□ 0.17
SMARCD2-205ENST00000577686 BICD2Q8TD16 824 aa16.12■□□□□ 0.17
SMARCD2-205ENST00000577686 ELAC1Q9H777 363 aaKnown RBP16.12■□□□□ 0.17
SMARCD2-205ENST00000577686 ESYT2A0FGR8 921 aa16.11■□□□□ 0.17
SMARCD2-205ENST00000577686 PPFIA3O75145 1194 aa16.11■□□□□ 0.17
SMARCD2-205ENST00000577686 FGF18O76093 207 aa16.11■□□□□ 0.17
SMARCD2-205ENST00000577686 CYP3A4P08684 503 aa16.11■□□□□ 0.17
SMARCD2-205ENST00000577686 ZSCAN20P17040 1043 aaPredicted RBP16.11■□□□□ 0.17
SMARCD2-205ENST00000577686 ATF7P17544 494 aaPredicted RBP16.11■□□□□ 0.17
SMARCD2-205ENST00000577686 CLK2P49760 499 aaKnown RBP16.11■□□□□ 0.17
SMARCD2-205ENST00000577686 METAP2P50579 478 aaKnown RBP eCLIP16.11■□□□□ 0.17
SMARCD2-205ENST00000577686 CAMK1Q14012 370 aa16.11■□□□□ 0.17
SMARCD2-205ENST00000577686 BMS1Q14692 1282 aaKnown RBP16.11■□□□□ 0.17
SMARCD2-205ENST00000577686 BMP2KLQ5H9B9 411 aa16.11■□□□□ 0.17
SMARCD2-205ENST00000577686 SWSAP1Q6NVH7 229 aa16.11■□□□□ 0.17
SMARCD2-205ENST00000577686 HFE2Q6ZVN8 426 aa16.11■□□□□ 0.17
SMARCD2-205ENST00000577686 RBM23Q86U06 439 aaKnown RBP16.11■□□□□ 0.17
SMARCD2-205ENST00000577686 CCDC60Q8IWA6 550 aaPredicted RBP16.11■□□□□ 0.17
SMARCD2-205ENST00000577686 KIAA0319LQ8IZA0 1049 aa16.11■□□□□ 0.17
SMARCD2-205ENST00000577686 REXO1Q8N1G1 1221 aaKnown RBP16.11■□□□□ 0.17
SMARCD2-205ENST00000577686 METTL13Q8N6R0 699 aa16.11■□□□□ 0.17
SMARCD2-205ENST00000577686 PHF7Q9BWX1 381 aaPredicted RBP16.11■□□□□ 0.17
SMARCD2-205ENST00000577686 TMX1Q9H3N1 280 aa16.11■□□□□ 0.17
SMARCD2-205ENST00000577686 ST3GAL5Q9UNP4 418 aa16.11■□□□□ 0.17
SMARCD2-205ENST00000577686 LZTS1Q9Y250 596 aa16.11■□□□□ 0.17
SMARCD2-205ENST00000577686 NOC2LQ9Y3T9 749 aaKnown RBP16.11■□□□□ 0.17
SMARCD2-205ENST00000577686 SAMM50Q9Y512 469 aa16.11■□□□□ 0.17
SMARCD2-205ENST00000577686 CARNS1A5YM72 827 aa16.1■□□□□ 0.17
SMARCD2-205ENST00000577686 RBAK-RBAKDNI3L0D1 243 aa16.1■□□□□ 0.17
SMARCD2-205ENST00000577686 CCNE2O96020 404 aa16.1■□□□□ 0.17
SMARCD2-205ENST00000577686 DNAJB1P25685 340 aa16.1■□□□□ 0.17
SMARCD2-205ENST00000577686 NHLH1Q02575 133 aa16.1■□□□□ 0.17
SMARCD2-205ENST00000577686 KRT17Q04695 432 aa16.1■□□□□ 0.17
SMARCD2-205ENST00000577686 PFKFB3Q16875 520 aaPredicted RBP16.1■□□□□ 0.17
SMARCD2-205ENST00000577686 JAKMIP3Q5VZ66 844 aa16.1■□□□□ 0.17
SMARCD2-205ENST00000577686 TYW1BQ6NUM6 668 aa16.1■□□□□ 0.17
SMARCD2-205ENST00000577686 BMP8AQ7Z5Y6 402 aa16.1■□□□□ 0.17
SMARCD2-205ENST00000577686 ADGRD2Q7Z7M1 963 aa16.1■□□□□ 0.17
SMARCD2-205ENST00000577686 LRRC43Q8N309 656 aa16.1■□□□□ 0.17
SMARCD2-205ENST00000577686 COLGALT1Q8NBJ5 622 aa16.1■□□□□ 0.17
SMARCD2-205ENST00000577686 CCDC148Q8NFR7 591 aa16.1■□□□□ 0.17
SMARCD2-205ENST00000577686 RSPH1Q8WYR4 309 aa16.1■□□□□ 0.17
SMARCD2-205ENST00000577686 FBXL18Q96ME1 805 aa16.1■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 20.3 ms