RNA–Protein interactions for RNA: ENST00000577300.1

SMCHD1-202, Transcript of structural maintenance of chromosomes flexible hinge domain containing 1, humanhuman

TSL 3

Gene SMCHD1, Length 506 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMCHD1-202ENST00000577300 NPTXRO95502 500 aa7.3□□□□□ -1.24
SMCHD1-202ENST00000577300 SDHAP31040 664 aa7.3□□□□□ -1.24
SMCHD1-202ENST00000577300 NOLC1Q14978 699 aaKnown RBP eCLIP7.3□□□□□ -1.24
SMCHD1-202ENST00000577300 TBR1Q16650 682 aa7.3□□□□□ -1.24
SMCHD1-202ENST00000577300 USP30Q70CQ3 517 aa7.3□□□□□ -1.24
SMCHD1-202ENST00000577300 OVCH1Q7RTY7 1134 aa7.3□□□□□ -1.24
SMCHD1-202ENST00000577300 POLNQ7Z5Q5 900 aa7.3□□□□□ -1.24
SMCHD1-202ENST00000577300 ZSWIM2Q8NEG5 633 aa7.3□□□□□ -1.24
SMCHD1-202ENST00000577300 WDR48Q8TAF3 677 aa7.3□□□□□ -1.24
SMCHD1-202ENST00000577300 ASB15Q8WXK1 588 aa7.3□□□□□ -1.24
SMCHD1-202ENST00000577300 DLG3Q92796 817 aa7.3□□□□□ -1.24
SMCHD1-202ENST00000577300 SCLYQ96I15 445 aa7.3□□□□□ -1.24
SMCHD1-202ENST00000577300 DNAJC7Q99615 494 aa7.3□□□□□ -1.24
SMCHD1-202ENST00000577300 DPYSL5Q9BPU6 564 aa7.3□□□□□ -1.24
SMCHD1-202ENST00000577300 MRPL4Q9BYD3 311 aaKnown RBP7.3□□□□□ -1.24
SMCHD1-202ENST00000577300 Q9UFV3 132 aa7.3□□□□□ -1.24
SMCHD1-202ENST00000577300 SFMBT1Q9UHJ3 866 aa7.3□□□□□ -1.24
SMCHD1-202ENST00000577300 COQ6Q9Y2Z9 468 aa7.3□□□□□ -1.24
SMCHD1-202ENST00000577300 ASB1Q9Y576 335 aa7.3□□□□□ -1.24
SMCHD1-202ENST00000577300 B3GALT1Q9Y5Z6 326 aa7.3□□□□□ -1.24
SMCHD1-202ENST00000577300 CDC14BO60729 498 aa7.29□□□□□ -1.24
SMCHD1-202ENST00000577300 MAFO75444 373 aaPredicted RBP7.29□□□□□ -1.24
SMCHD1-202ENST00000577300 CD83Q01151 205 aa7.29□□□□□ -1.24
SMCHD1-202ENST00000577300 TM4SF20Q53R12 229 aa7.29□□□□□ -1.24
SMCHD1-202ENST00000577300 SOGA3Q5TF21 947 aa7.29□□□□□ -1.24
SMCHD1-202ENST00000577300 LRSAM1Q6UWE0 723 aa7.29□□□□□ -1.24
SMCHD1-202ENST00000577300 Q6ZSN1 163 aa7.29□□□□□ -1.24
SMCHD1-202ENST00000577300 OTOP2Q7RTS6 562 aa7.29□□□□□ -1.24
SMCHD1-202ENST00000577300 CFHR4Q92496 578 aa7.29□□□□□ -1.24
SMCHD1-202ENST00000577300 KIAA1683Q9H0B3 1180 aa7.29□□□□□ -1.24
SMCHD1-202ENST00000577300 PUF60Q9UHX1 559 aaKnown RBP7.29□□□□□ -1.24
SMCHD1-202ENST00000577300 SLC12A8A0AV02 714 aa7.28□□□□□ -1.24
SMCHD1-202ENST00000577300 FOXP2O15409 715 aa7.28□□□□□ -1.24
SMCHD1-202ENST00000577300 SLPIP03973 132 aa7.28□□□□□ -1.24
SMCHD1-202ENST00000577300 RPS19P39019 145 aaKnown RBP7.28□□□□□ -1.24
SMCHD1-202ENST00000577300 PCOLCEQ15113 449 aa7.28□□□□□ -1.24
SMCHD1-202ENST00000577300 FSTL4Q6MZW2 842 aa7.28□□□□□ -1.24
SMCHD1-202ENST00000577300 RNF207Q6ZRF8 634 aa7.28□□□□□ -1.24
SMCHD1-202ENST00000577300 THAP3Q8WTV1 239 aaPredicted RBP7.28□□□□□ -1.24
SMCHD1-202ENST00000577300 GBP4Q96PP9 640 aa7.28□□□□□ -1.24
SMCHD1-202ENST00000577300 SRPK1Q96SB4 655 aaKnown RBP7.28□□□□□ -1.24
SMCHD1-202ENST00000577300 PLA2G12BQ9BX93 195 aa7.28□□□□□ -1.24
SMCHD1-202ENST00000577300 CDC42EP3Q9UKI2 254 aa7.28□□□□□ -1.24
SMCHD1-202ENST00000577300 RASSF10A6NK89 507 aa7.27□□□□□ -1.25
SMCHD1-202ENST00000577300 KCNA6P17658 529 aa7.27□□□□□ -1.25
SMCHD1-202ENST00000577300 ACO1P21399 889 aaKnown RBP7.27□□□□□ -1.25
SMCHD1-202ENST00000577300 MEOX1P50221 254 aa7.27□□□□□ -1.25
SMCHD1-202ENST00000577300 FOXE3Q13461 319 aa7.27□□□□□ -1.25
SMCHD1-202ENST00000577300 MOGSQ13724 837 aa7.27□□□□□ -1.25
SMCHD1-202ENST00000577300 MIIPQ5JXC2 388 aa7.27□□□□□ -1.25
SMCHD1-202ENST00000577300 GRAMD4Q6IC98 578 aa7.27□□□□□ -1.25
SMCHD1-202ENST00000577300 MAMDC4Q6UXC1 1216 aa7.27□□□□□ -1.25
SMCHD1-202ENST00000577300 BRAPQ7Z569 592 aa7.27□□□□□ -1.25
SMCHD1-202ENST00000577300 OR14A2Q96R54 314 aa7.27□□□□□ -1.25
SMCHD1-202ENST00000577300 OR10A2Q9H208 303 aa7.27□□□□□ -1.25
SMCHD1-202ENST00000577300 C12orf65Q9H3J6 166 aaKnown RBP7.27□□□□□ -1.25
SMCHD1-202ENST00000577300 TCRBV16S1A1N1A0A5B0 115 aa7.26□□□□□ -1.25
SMCHD1-202ENST00000577300 PRAMEF22A3QJZ6 481 aa7.26□□□□□ -1.25
SMCHD1-202ENST00000577300 GOLGA6L22H0YM25 854 aa7.26□□□□□ -1.25
SMCHD1-202ENST00000577300 MRE11P49959 708 aa7.26□□□□□ -1.25
SMCHD1-202ENST00000577300 HMGA2P52926 109 aa7.26□□□□□ -1.25
SMCHD1-202ENST00000577300 FILIP1Q7Z7B0 1213 aa7.26□□□□□ -1.25
SMCHD1-202ENST00000577300 ZFPM1Q8IX07 1006 aa7.26□□□□□ -1.25
SMCHD1-202ENST00000577300 HIPK4Q8NE63 616 aa7.26□□□□□ -1.25
SMCHD1-202ENST00000577300 CALML6Q8TD86 181 aa7.26□□□□□ -1.25
SMCHD1-202ENST00000577300 ZNF503Q96F45 646 aa7.26□□□□□ -1.25
SMCHD1-202ENST00000577300 FAM89AQ96GI7 184 aa7.26□□□□□ -1.25
SMCHD1-202ENST00000577300 PCED1AQ9H1Q7 454 aa7.26□□□□□ -1.25
SMCHD1-202ENST00000577300 PMS2P1A4D2B8 440 aa7.25□□□□□ -1.25
SMCHD1-202ENST00000577300 HIP1RO75146 1068 aa7.25□□□□□ -1.25
SMCHD1-202ENST00000577300 USP39Q53GS9 565 aaKnown RBP7.25□□□□□ -1.25
SMCHD1-202ENST00000577300 C2orf27AQ580R0 203 aa7.25□□□□□ -1.25
SMCHD1-202ENST00000577300 ABHD17CQ6PCB6 329 aa7.25□□□□□ -1.25
SMCHD1-202ENST00000577300 OTOP1Q7RTM1 612 aa7.25□□□□□ -1.25
SMCHD1-202ENST00000577300 FGD2Q7Z6J4 655 aa7.25□□□□□ -1.25
SMCHD1-202ENST00000577300 RTKN2Q8IZC4 609 aa7.25□□□□□ -1.25
SMCHD1-202ENST00000577300 MRIQ9BWK5 157 aa7.25□□□□□ -1.25
SMCHD1-202ENST00000577300 NELFAQ9H3P2 528 aa7.25□□□□□ -1.25
SMCHD1-202ENST00000577300 TRIM39Q9HCM9 518 aa7.25□□□□□ -1.25
SMCHD1-202ENST00000577300 APEX1P27695 318 aaKnown RBP7.24□□□□□ -1.25
SMCHD1-202ENST00000577300 HGFACQ04756 655 aa7.24□□□□□ -1.25
SMCHD1-202ENST00000577300 NRN1LQ496H8 165 aa7.24□□□□□ -1.25
SMCHD1-202ENST00000577300 TMEM177Q53S58 311 aa7.24□□□□□ -1.25
SMCHD1-202ENST00000577300 CATSPEREQ5SY80 951 aa7.24□□□□□ -1.25
SMCHD1-202ENST00000577300 C2orf69Q8N8R5 385 aa7.24□□□□□ -1.25
SMCHD1-202ENST00000577300 IGSF22Q8N9C0 903 aa7.24□□□□□ -1.25
SMCHD1-202ENST00000577300 NCOA5Q9HCD5 579 aaKnown RBP7.24□□□□□ -1.25
SMCHD1-202ENST00000577300 HS3ST3A1Q9Y663 406 aa7.24□□□□□ -1.25
SMCHD1-202ENST00000577300 PTCH2Q9Y6C5 1203 aa7.24□□□□□ -1.25
SMCHD1-202ENST00000577300 ZBTB48P10074 688 aaPredicted RBP7.23□□□□□ -1.25
SMCHD1-202ENST00000577300 IRF9Q00978 393 aa7.23□□□□□ -1.25
SMCHD1-202ENST00000577300 TMEM132BQ14DG7 1078 aa7.23□□□□□ -1.25
SMCHD1-202ENST00000577300 CC2D1AQ6P1N0 951 aaPredicted RBP7.23□□□□□ -1.25
SMCHD1-202ENST00000577300 BOCQ9BWV1 1114 aa7.23□□□□□ -1.25
SMCHD1-202ENST00000577300 ZNF341Q9BYN7 854 aa7.23□□□□□ -1.25
SMCHD1-202ENST00000577300 PLA2G3Q9NZ20 509 aa7.23□□□□□ -1.25
SMCHD1-202ENST00000577300 PODXL2Q9NZ53 605 aa7.23□□□□□ -1.25
SMCHD1-202ENST00000577300 VWA7Q9Y334 891 aa7.23□□□□□ -1.25
SMCHD1-202ENST00000577300 PLSCR1O15162 318 aa7.22□□□□□ -1.25
SMCHD1-202ENST00000577300 SUV39H1O43463 412 aa7.22□□□□□ -1.25
Retrieved 100 of 20,778 RNA–protein pairs in 20 ms