RNA–Protein interactions for RNA: ENST00000576353.5

SNF8-217, Transcript of SNF8, ESCRT-II complex subunit, humanhuman

TSL 5

Gene SNF8, Length 700 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNF8-217ENST00000576353 PCDHA11Q9Y5I1 949 aa26.4■■□□□ 1.82
SNF8-217ENST00000576353 TRPV2Q9Y5S1 764 aa26.4■■□□□ 1.82
SNF8-217ENST00000576353 KIF28PB7ZC32 967 aa26.39■■□□□ 1.82
SNF8-217ENST00000576353 WNT7AO00755 349 aa26.39■■□□□ 1.82
SNF8-217ENST00000576353 P4HBP07237 508 aaKnown RBP26.39■■□□□ 1.82
SNF8-217ENST00000576353 NCAPH2Q6IBW4 605 aa26.39■■□□□ 1.82
SNF8-217ENST00000576353 METTL13Q8N6R0 699 aa26.39■■□□□ 1.82
SNF8-217ENST00000576353 USP38Q8NB14 1042 aa26.39■■□□□ 1.82
SNF8-217ENST00000576353 MTMR9Q96QG7 549 aa26.39■■□□□ 1.82
SNF8-217ENST00000576353 IFIH1Q9BYX4 1025 aaKnown RBP26.39■■□□□ 1.82
SNF8-217ENST00000576353 CELF4Q9BZC1 486 aaKnown RBP26.39■■□□□ 1.82
SNF8-217ENST00000576353 TTC12Q9H892 705 aaPredicted RBP26.39■■□□□ 1.82
SNF8-217ENST00000576353 SQORQ9Y6N5 450 aa26.39■■□□□ 1.82
SNF8-217ENST00000576353 SZT2Q5T011 3432 aa26.38■■□□□ 1.81
SNF8-217ENST00000576353 TET1Q8NFU7 2136 aa26.38■■□□□ 1.81
SNF8-217ENST00000576353 GHRP10912 638 aa26.38■■□□□ 1.81
SNF8-217ENST00000576353 TMOD1P28289 359 aa26.38■■□□□ 1.81
SNF8-217ENST00000576353 TXKP42681 527 aa26.38■■□□□ 1.81
SNF8-217ENST00000576353 SPIRE1Q08AE8 756 aa26.38■■□□□ 1.81
SNF8-217ENST00000576353 TMEM62Q0P6H9 643 aa26.38■■□□□ 1.81
SNF8-217ENST00000576353 LPIN1Q14693 890 aa26.38■■□□□ 1.81
SNF8-217ENST00000576353 FBXO47Q5MNV8 452 aa26.38■■□□□ 1.81
SNF8-217ENST00000576353 HERC6Q8IVU3 1022 aa26.38■■□□□ 1.81
SNF8-217ENST00000576353 OSBPL7Q9BZF2 842 aa26.38■■□□□ 1.81
SNF8-217ENST00000576353 SEPT9Q9UHD8 586 aaPredicted RBP26.38■■□□□ 1.81
SNF8-217ENST00000576353 KDM3AQ9Y4C1 1321 aa26.38■■□□□ 1.81
SNF8-217ENST00000576353 DDX11L8A8MPP1 907 aa26.37■■□□□ 1.81
SNF8-217ENST00000576353 H3BQV1 296 aa26.37■■□□□ 1.81
SNF8-217ENST00000576353 RABGGTBP53611 331 aa26.37■■□□□ 1.81
SNF8-217ENST00000576353 TARBP2Q15633 366 aaKnown RBP26.37■■□□□ 1.81
SNF8-217ENST00000576353 TTC38Q5R3I4 469 aa26.37■■□□□ 1.81
SNF8-217ENST00000576353 TSHZ1Q6ZSZ6 1077 aa26.37■■□□□ 1.81
SNF8-217ENST00000576353 FAM161BQ96MY7 647 aa26.37■■□□□ 1.81
SNF8-217ENST00000576353 TTYH1Q9H313 450 aaPredicted RBP26.37■■□□□ 1.81
SNF8-217ENST00000576353 STBD1O95210 358 aa26.36■■□□□ 1.81
SNF8-217ENST00000576353 AMHP03971 560 aa26.36■■□□□ 1.81
SNF8-217ENST00000576353 TBC1D8BQ0IIM8 1120 aa26.36■■□□□ 1.81
SNF8-217ENST00000576353 CUL4AQ13619 759 aa26.36■■□□□ 1.81
SNF8-217ENST00000576353 ZNF174Q15697 407 aa26.36■■□□□ 1.81
SNF8-217ENST00000576353 EFCAB12Q6NXP0 572 aa26.36■■□□□ 1.81
SNF8-217ENST00000576353 ZNF710Q8N1W2 664 aa26.36■■□□□ 1.81
SNF8-217ENST00000576353 MAP7D2Q96T17 732 aa26.36■■□□□ 1.81
SNF8-217ENST00000576353 ZNF576Q9H609 170 aa26.36■■□□□ 1.81
SNF8-217ENST00000576353 SLC28A3Q9HAS3 691 aa26.36■■□□□ 1.81
SNF8-217ENST00000576353 LAMA2P24043 3122 aaKnown RBP26.35■■□□□ 1.81
SNF8-217ENST00000576353 DEFB103AP81534 67 aa26.35■■□□□ 1.81
SNF8-217ENST00000576353 MCTP1Q6DN14 999 aa26.35■■□□□ 1.81
SNF8-217ENST00000576353 C4orf19Q8IY42 314 aa26.35■■□□□ 1.81
SNF8-217ENST00000576353 ZBED2Q9BTP6 218 aa26.35■■□□□ 1.81
SNF8-217ENST00000576353 TMEM60Q9H2L4 133 aa26.35■■□□□ 1.81
SNF8-217ENST00000576353 NKX2-4Q9H2Z4 354 aa26.35■■□□□ 1.81
SNF8-217ENST00000576353 ZSWIM4Q9H7M6 989 aa26.35■■□□□ 1.81
SNF8-217ENST00000576353 YBX2Q9Y2T7 364 aaKnown RBP26.35■■□□□ 1.81
SNF8-217ENST00000576353 MKRN4PQ13434 485 aaPredicted RBP26.34■■□□□ 1.81
SNF8-217ENST00000576353 MTERF2Q49AM1 385 aa26.34■■□□□ 1.81
SNF8-217ENST00000576353 LARP1BQ659C4 914 aaKnown RBP26.34■■□□□ 1.81
SNF8-217ENST00000576353 FAM43BQ6ZT52 329 aaPredicted RBP26.34■■□□□ 1.81
SNF8-217ENST00000576353 ANO5Q75V66 913 aa26.34■■□□□ 1.81
SNF8-217ENST00000576353 LXNQ9BS40 222 aa26.34■■□□□ 1.81
SNF8-217ENST00000576353 SUGCTQ9HAC7 445 aa26.34■■□□□ 1.81
SNF8-217ENST00000576353 RGL1Q9NZL6 768 aa26.34■■□□□ 1.81
SNF8-217ENST00000576353 MYH9P35579 1960 aaKnown RBP26.34■■□□□ 1.81
SNF8-217ENST00000576353 TLL1O43897 1013 aa26.33■■□□□ 1.81
SNF8-217ENST00000576353 OR52Z1P0C646 297 aa26.33■■□□□ 1.81
SNF8-217ENST00000576353 CLCN3P51790 818 aa26.33■■□□□ 1.81
SNF8-217ENST00000576353 LIN28BQ6ZN17 250 aaKnown RBP eCLIP26.33■■□□□ 1.81
SNF8-217ENST00000576353 OTUD6AQ7L8S5 288 aa26.33■■□□□ 1.81
SNF8-217ENST00000576353 LINC01465Q8N7H1 131 aa26.33■■□□□ 1.81
SNF8-217ENST00000576353 NEK9Q8TD19 979 aa26.33■■□□□ 1.81
SNF8-217ENST00000576353 DYDC2Q96IM9 177 aa26.33■■□□□ 1.81
SNF8-217ENST00000576353 EIF2AK1Q9BQI3 630 aaKnown RBP26.33■■□□□ 1.81
SNF8-217ENST00000576353 GINS2Q9Y248 185 aa26.33■■□□□ 1.81
SNF8-217ENST00000576353 PPME1Q9Y570 386 aa26.33■■□□□ 1.81
SNF8-217ENST00000576353 SLITRK3O94933 977 aa26.32■■□□□ 1.8
SNF8-217ENST00000576353 GJB5O95377 273 aa26.32■■□□□ 1.8
SNF8-217ENST00000576353 MYOGP15173 224 aa26.32■■□□□ 1.8
SNF8-217ENST00000576353 DNM2P50570 870 aa26.32■■□□□ 1.8
SNF8-217ENST00000576353 CRYBB1P53674 252 aaPredicted RBP26.32■■□□□ 1.8
SNF8-217ENST00000576353 ODR4Q5SWX8 454 aa26.32■■□□□ 1.8
SNF8-217ENST00000576353 TPH2Q8IWU9 490 aa26.32■■□□□ 1.8
SNF8-217ENST00000576353 EXOC8Q8IYI6 725 aa26.32■■□□□ 1.8
SNF8-217ENST00000576353 LRRC71Q8N4P6 559 aa26.32■■□□□ 1.8
SNF8-217ENST00000576353 HSD17B14Q9BPX1 270 aa26.32■■□□□ 1.8
SNF8-217ENST00000576353 JPH2Q9BR39 696 aaPredicted RBP26.32■■□□□ 1.8
SNF8-217ENST00000576353 AGO3Q9H9G7 860 aaKnown RBP26.32■■□□□ 1.8
SNF8-217ENST00000576353 AKT3Q9Y243 479 aa26.32■■□□□ 1.8
SNF8-217ENST00000576353 TMEM150BA6NC51 233 aa26.31■■□□□ 1.8
SNF8-217ENST00000576353 VTNP04004 478 aa26.31■■□□□ 1.8
SNF8-217ENST00000576353 CD52P31358 61 aa26.31■■□□□ 1.8
SNF8-217ENST00000576353 CYP4A11Q02928 519 aa26.31■■□□□ 1.8
SNF8-217ENST00000576353 PAK2Q13177 524 aa26.31■■□□□ 1.8
SNF8-217ENST00000576353 CTTNQ14247 550 aaKnown RBP26.31■■□□□ 1.8
SNF8-217ENST00000576353 MYOCDQ8IZQ8 938 aa26.31■■□□□ 1.8
SNF8-217ENST00000576353 GUCD1Q96NT3 240 aa26.31■■□□□ 1.8
SNF8-217ENST00000576353 CEP89Q96ST8 783 aa26.31■■□□□ 1.8
SNF8-217ENST00000576353 RAD9AQ99638 391 aa26.31■■□□□ 1.8
SNF8-217ENST00000576353 FTHL17Q9BXU8 183 aa26.31■■□□□ 1.8
SNF8-217ENST00000576353 CYP26B1Q9NR63 512 aa26.31■■□□□ 1.8
SNF8-217ENST00000576353 WRAP73Q9P2S5 460 aaPredicted RBP26.31■■□□□ 1.8
SNF8-217ENST00000576353 GPR32O75388 356 aa26.3■■□□□ 1.8
Retrieved 100 of 20,778 RNA–protein pairs in 78.9 ms