RNA–Protein interactions for RNA: ENST00000576348.1

ERCC4-208, Transcript of ERCC excision repair 4, endonuclease catalytic subunit, humanhuman

TSL 2

Gene ERCC4, Length 604 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC4-208ENST00000576348 KCND2Q9NZV8 630 aa18.34■□□□□ 0.53
ERCC4-208ENST00000576348 MCM3APO60318 1980 aa18.33■□□□□ 0.53
ERCC4-208ENST00000576348 TMEM150BA6NC51 233 aa18.33■□□□□ 0.52
ERCC4-208ENST00000576348 GJA9P57773 515 aa18.33■□□□□ 0.52
ERCC4-208ENST00000576348 RAD51AP2Q09MP3 1159 aa18.33■□□□□ 0.52
ERCC4-208ENST00000576348 GNASQ5JWF2 1037 aa18.33■□□□□ 0.52
ERCC4-208ENST00000576348 ANO5Q75V66 913 aa18.33■□□□□ 0.52
ERCC4-208ENST00000576348 CCDC65Q8IXS2 484 aa18.33■□□□□ 0.52
ERCC4-208ENST00000576348 GSDMAQ96QA5 445 aa18.33■□□□□ 0.52
ERCC4-208ENST00000576348 MTRQ99707 1265 aa18.33■□□□□ 0.52
ERCC4-208ENST00000576348 RUSC1Q9BVN2 902 aa18.33■□□□□ 0.52
ERCC4-208ENST00000576348 CYP26B1Q9NR63 512 aa18.33■□□□□ 0.52
ERCC4-208ENST00000576348 KIAA1217Q5T5P2 1943 aa18.33■□□□□ 0.52
ERCC4-208ENST00000576348 SYNRGQ9UMZ2 1314 aa18.32■□□□□ 0.52
ERCC4-208ENST00000576348 CASP8AP2Q9UKL3 1982 aa18.32■□□□□ 0.52
ERCC4-208ENST00000576348 H3BRB1 525 aa18.32■□□□□ 0.52
ERCC4-208ENST00000576348 HBP1O60381 514 aa18.32■□□□□ 0.52
ERCC4-208ENST00000576348 FAM13AO94988 1023 aa18.32■□□□□ 0.52
ERCC4-208ENST00000576348 PGK1P00558 417 aa18.32■□□□□ 0.52
ERCC4-208ENST00000576348 HOXD8P13378 290 aaPredicted RBP18.32■□□□□ 0.52
ERCC4-208ENST00000576348 POLGP54098 1239 aaPredicted RBP18.32■□□□□ 0.52
ERCC4-208ENST00000576348 NPEPPSP55786 919 aa18.32■□□□□ 0.52
ERCC4-208ENST00000576348 TYRO3Q06418 890 aa18.32■□□□□ 0.52
ERCC4-208ENST00000576348 PLCB4Q15147 1175 aa18.32■□□□□ 0.52
ERCC4-208ENST00000576348 STX1AQ16623 288 aa18.32■□□□□ 0.52
ERCC4-208ENST00000576348 RINT1Q6NUQ1 792 aa18.32■□□□□ 0.52
ERCC4-208ENST00000576348 SH2D3AQ9BRG2 576 aa18.32■□□□□ 0.52
ERCC4-208ENST00000576348 UPF3AQ9H1J1 476 aaKnown RBP18.32■□□□□ 0.52
ERCC4-208ENST00000576348 TUT1Q9H6E5 874 aaKnown RBP18.32■□□□□ 0.52
ERCC4-208ENST00000576348 PPME1Q9Y570 386 aa18.32■□□□□ 0.52
ERCC4-208ENST00000576348 DOCK3Q8IZD9 2030 aa18.32■□□□□ 0.52
ERCC4-208ENST00000576348 NPHP3-ACAD11A0A0J9YXS1 232 aa18.31■□□□□ 0.52
ERCC4-208ENST00000576348 PVALEFA0A1B0GWK0 134 aa18.31■□□□□ 0.52
ERCC4-208ENST00000576348 ATP4AP20648 1035 aa18.31■□□□□ 0.52
ERCC4-208ENST00000576348 RFC5P40937 340 aa18.31■□□□□ 0.52
ERCC4-208ENST00000576348 PKN2Q16513 984 aaKnown RBP18.31■□□□□ 0.52
ERCC4-208ENST00000576348 ISM2Q6H9L7 571 aa18.31■□□□□ 0.52
ERCC4-208ENST00000576348 UNC13DQ70J99 1090 aa18.31■□□□□ 0.52
ERCC4-208ENST00000576348 RNF180Q86T96 592 aa18.31■□□□□ 0.52
ERCC4-208ENST00000576348 EXOC8Q8IYI6 725 aa18.31■□□□□ 0.52
ERCC4-208ENST00000576348 SLC7A3Q8WY07 619 aa18.31■□□□□ 0.52
ERCC4-208ENST00000576348 TIPINQ9BVW5 301 aa18.31■□□□□ 0.52
ERCC4-208ENST00000576348 KATNAL1Q9BW62 490 aa18.31■□□□□ 0.52
ERCC4-208ENST00000576348 NIFKQ9BYG3 293 aaKnown RBP18.31■□□□□ 0.52
ERCC4-208ENST00000576348 GTPBP4Q9BZE4 634 aaKnown RBP18.31■□□□□ 0.52
ERCC4-208ENST00000576348 XRN2Q9H0D6 950 aaKnown RBP eCLIP18.31■□□□□ 0.52
ERCC4-208ENST00000576348 TSPY26PQ9H489 355 aa18.31■□□□□ 0.52
ERCC4-208ENST00000576348 ATP6V0A4Q9HBG4 840 aa18.31■□□□□ 0.52
ERCC4-208ENST00000576348 PANK4Q9NVE7 773 aa18.31■□□□□ 0.52
ERCC4-208ENST00000576348 ANO10Q9NW15 660 aa18.31■□□□□ 0.52
ERCC4-208ENST00000576348 TUBE1Q9UJT0 475 aa18.31■□□□□ 0.52
ERCC4-208ENST00000576348 MAN1B1Q9UKM7 699 aa18.31■□□□□ 0.52
ERCC4-208ENST00000576348 COL4A3BPQ9Y5P4 624 aa18.31■□□□□ 0.52
ERCC4-208ENST00000576348 DGAT1O75907 488 aa18.3■□□□□ 0.52
ERCC4-208ENST00000576348 STBD1O95210 358 aa18.3■□□□□ 0.52
ERCC4-208ENST00000576348 MYCP01106 439 aaPredicted RBP18.3■□□□□ 0.52
ERCC4-208ENST00000576348 GUCY2CP25092 1073 aa18.3■□□□□ 0.52
ERCC4-208ENST00000576348 ZNF445P59923 1031 aa18.3■□□□□ 0.52
ERCC4-208ENST00000576348 CACNB1Q02641 598 aaPredicted RBP18.3■□□□□ 0.52
ERCC4-208ENST00000576348 TBC1D8BQ0IIM8 1120 aa18.3■□□□□ 0.52
ERCC4-208ENST00000576348 KMT5BQ4FZB7 885 aa18.3■□□□□ 0.52
ERCC4-208ENST00000576348 ARSHQ5FYA8 562 aa18.3■□□□□ 0.52
ERCC4-208ENST00000576348 ZNF484Q5JVG2 852 aa18.3■□□□□ 0.52
ERCC4-208ENST00000576348 FAM102BQ5T8I3 360 aa18.3■□□□□ 0.52
ERCC4-208ENST00000576348 CNNM4Q6P4Q7 775 aa18.3■□□□□ 0.52
ERCC4-208ENST00000576348 FBXO46Q6PJ61 603 aaPredicted RBP18.3■□□□□ 0.52
ERCC4-208ENST00000576348 LRSAM1Q6UWE0 723 aa18.3■□□□□ 0.52
ERCC4-208ENST00000576348 C1orf186Q6ZWK4 172 aa18.3■□□□□ 0.52
ERCC4-208ENST00000576348 MAEAQ7L5Y9 396 aa18.3■□□□□ 0.52
ERCC4-208ENST00000576348 TRIML1Q8N9V2 468 aa18.3■□□□□ 0.52
ERCC4-208ENST00000576348 PCSK9Q8NBP7 692 aaKnown RBP18.3■□□□□ 0.52
ERCC4-208ENST00000576348 MCPH1Q8NEM0 835 aa18.3■□□□□ 0.52
ERCC4-208ENST00000576348 JPH2Q9BR39 696 aaPredicted RBP18.3■□□□□ 0.52
ERCC4-208ENST00000576348 REEP2Q9BRK0 252 aa18.3■□□□□ 0.52
ERCC4-208ENST00000576348 C16orf70Q9BSU1 422 aa18.3■□□□□ 0.52
ERCC4-208ENST00000576348 MTG1Q9BT17 334 aaPredicted RBP18.3■□□□□ 0.52
ERCC4-208ENST00000576348 HIP1RO75146 1068 aa18.29■□□□□ 0.52
ERCC4-208ENST00000576348 GAP43P17677 238 aa18.29■□□□□ 0.52
ERCC4-208ENST00000576348 PSEN2P49810 448 aa18.29■□□□□ 0.52
ERCC4-208ENST00000576348 NLRP12P59046 1061 aa18.29■□□□□ 0.52
ERCC4-208ENST00000576348 IGBP1P78318 339 aa18.29■□□□□ 0.52
ERCC4-208ENST00000576348 PPFIA1Q13136 1202 aa18.29■□□□□ 0.52
ERCC4-208ENST00000576348 GIT2Q14161 759 aa18.29■□□□□ 0.52
ERCC4-208ENST00000576348 KCNB1Q14721 858 aa18.29■□□□□ 0.52
ERCC4-208ENST00000576348 MFSD10Q14728 455 aa18.29■□□□□ 0.52
ERCC4-208ENST00000576348 HERC4Q5GLZ8 1057 aaPredicted RBP18.29■□□□□ 0.52
ERCC4-208ENST00000576348 NT5DC1Q5TFE4 455 aa18.29■□□□□ 0.52
ERCC4-208ENST00000576348 DRC1Q96MC2 740 aa18.29■□□□□ 0.52
ERCC4-208ENST00000576348 RNPEPQ9H4A4 650 aa18.29■□□□□ 0.52
ERCC4-208ENST00000576348 DACH1Q9UI36 760 aa18.29■□□□□ 0.52
ERCC4-208ENST00000576348 ODF2LQ9ULJ1 636 aa18.29■□□□□ 0.52
ERCC4-208ENST00000576348 MYADML2A6NDP7 307 aa18.28■□□□□ 0.52
ERCC4-208ENST00000576348 F2P00734 622 aa18.28■□□□□ 0.52
ERCC4-208ENST00000576348 SARSP49591 514 aaKnown RBP18.28■□□□□ 0.52
ERCC4-208ENST00000576348 IRX5P78411 483 aaPredicted RBP18.28■□□□□ 0.52
ERCC4-208ENST00000576348 COASYQ13057 564 aa18.28■□□□□ 0.52
ERCC4-208ENST00000576348 STIM1Q13586 685 aa18.28■□□□□ 0.52
ERCC4-208ENST00000576348 EMC2Q15006 297 aa18.28■□□□□ 0.52
ERCC4-208ENST00000576348 KIAA0753Q2KHM9 967 aa18.28■□□□□ 0.52
ERCC4-208ENST00000576348 MYCT1Q8N699 235 aa18.28■□□□□ 0.52
Retrieved 100 of 20,778 RNA–protein pairs in 38.4 ms