RNA–Protein interactions for RNA: ENST00000576222.1

PCDHGB3-201, Transcript of protocadherin gamma subfamily B, 3, humanhuman

TSL 1 (best) BASIC

Gene PCDHGB3, Length 4,727 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGB3-201ENST00000576222 TRIM51Q9BSJ1 452 aa14.13□□□□□ -0.15
PCDHGB3-201ENST00000576222 ARHGEF10LQ9HCE6 1279 aa14.13□□□□□ -0.15
PCDHGB3-201ENST00000576222 UBE2Q2LH0YL09 131 aa14.12□□□□□ -0.15
PCDHGB3-201ENST00000576222 PLEKP08567 350 aaPredicted RBP14.12□□□□□ -0.15
PCDHGB3-201ENST00000576222 TOB1P50616 345 aaPredicted RBP14.12□□□□□ -0.15
PCDHGB3-201ENST00000576222 BPIFB4P59827 614 aa14.12□□□□□ -0.15
PCDHGB3-201ENST00000576222 HADHQ16836 314 aaKnown RBP14.12□□□□□ -0.15
PCDHGB3-201ENST00000576222 SLC30A9Q6PML9 568 aa14.12□□□□□ -0.15
PCDHGB3-201ENST00000576222 TRIM55Q9BYV6 548 aa14.12□□□□□ -0.15
PCDHGB3-201ENST00000576222 CPVLQ9H3G5 476 aa14.12□□□□□ -0.15
PCDHGB3-201ENST00000576222 NRXN1Q9ULB1 1477 aa14.12□□□□□ -0.15
PCDHGB3-201ENST00000576222 STXBP3O00186 592 aa14.12□□□□□ -0.15
PCDHGB3-201ENST00000576222 RPS6KA5O75582 802 aa14.12□□□□□ -0.15
PCDHGB3-201ENST00000576222 KLRC1P26715 233 aa14.12□□□□□ -0.15
PCDHGB3-201ENST00000576222 CCDC137Q6PK04 289 aaKnown RBP14.12□□□□□ -0.15
PCDHGB3-201ENST00000576222 SMC1BQ8NDV3 1235 aa14.12□□□□□ -0.15
PCDHGB3-201ENST00000576222 RFFLQ8WZ73 363 aa14.12□□□□□ -0.15
PCDHGB3-201ENST00000576222 TRIM11Q96F44 468 aa14.12□□□□□ -0.15
PCDHGB3-201ENST00000576222 CYTH2Q99418 400 aa14.12□□□□□ -0.15
PCDHGB3-201ENST00000576222 SATB1Q01826 763 aa14.12□□□□□ -0.15
PCDHGB3-201ENST00000576222 MKRN3Q13064 507 aaKnown RBP14.12□□□□□ -0.15
PCDHGB3-201ENST00000576222 RASA3Q14644 834 aa14.12□□□□□ -0.15
PCDHGB3-201ENST00000576222 KIAA1755Q5JYT7 1200 aa14.12□□□□□ -0.15
PCDHGB3-201ENST00000576222 RBM26Q5T8P6 1007 aaKnown RBP14.12□□□□□ -0.15
PCDHGB3-201ENST00000576222 CASKIN2Q8WXE0 1202 aa14.12□□□□□ -0.15
PCDHGB3-201ENST00000576222 ISCA1Q9BUE6 129 aa14.12□□□□□ -0.15
PCDHGB3-201ENST00000576222 ZNF804BA4D1E1 1349 aa14.12□□□□□ -0.15
PCDHGB3-201ENST00000576222 LMTK2Q8IWU2 1503 aa14.12□□□□□ -0.15
PCDHGB3-201ENST00000576222 CREB3O43889 395 aa14.12□□□□□ -0.15
PCDHGB3-201ENST00000576222 PLS3P13797 630 aa14.12□□□□□ -0.15
PCDHGB3-201ENST00000576222 TCP10Q12799 353 aa14.12□□□□□ -0.15
PCDHGB3-201ENST00000576222 NR1H3Q13133 447 aa14.12□□□□□ -0.15
PCDHGB3-201ENST00000576222 DYNC1I2Q13409 638 aaKnown RBP14.12□□□□□ -0.15
PCDHGB3-201ENST00000576222 RNF207Q6ZRF8 634 aa14.12□□□□□ -0.15
PCDHGB3-201ENST00000576222 PCIF1Q9H4Z3 704 aa14.12□□□□□ -0.15
PCDHGB3-201ENST00000576222 USP40Q9NVE5 1235 aa14.12□□□□□ -0.15
PCDHGB3-201ENST00000576222 THEGQ9P2T0 379 aa14.12□□□□□ -0.15
PCDHGB3-201ENST00000576222 PNPLA7Q6ZV29 1317 aa14.12□□□□□ -0.15
PCDHGB3-201ENST00000576222 DLC1Q96QB1 1528 aa14.11□□□□□ -0.15
PCDHGB3-201ENST00000576222 E9PMD0 336 aa14.11□□□□□ -0.15
PCDHGB3-201ENST00000576222 DKC1O60832 514 aaKnown RBP eCLIP14.11□□□□□ -0.15
PCDHGB3-201ENST00000576222 FGFR4P22455 802 aa14.11□□□□□ -0.15
PCDHGB3-201ENST00000576222 NT5C2P49902 561 aa14.11□□□□□ -0.15
PCDHGB3-201ENST00000576222 CDR2Q01850 454 aa14.11□□□□□ -0.15
PCDHGB3-201ENST00000576222 NAB2Q15742 525 aa14.11□□□□□ -0.15
PCDHGB3-201ENST00000576222 HLFQ16534 295 aa14.11□□□□□ -0.15
PCDHGB3-201ENST00000576222 C7orf25Q9BPX7 421 aa14.11□□□□□ -0.15
PCDHGB3-201ENST00000576222 BARHL2Q9NY43 387 aa14.11□□□□□ -0.15
PCDHGB3-201ENST00000576222 VIRMAQ69YN4 1812 aaKnown RBP14.11□□□□□ -0.15
PCDHGB3-201ENST00000576222 NR3C1P04150 777 aa14.11□□□□□ -0.15
PCDHGB3-201ENST00000576222 MYCLP12524 364 aaPredicted RBP14.11□□□□□ -0.15
PCDHGB3-201ENST00000576222 RFC1P35251 1148 aaPredicted RBP14.11□□□□□ -0.15
PCDHGB3-201ENST00000576222 SLC16A2P36021 539 aa14.11□□□□□ -0.15
PCDHGB3-201ENST00000576222 SCTRP47872 440 aa14.11□□□□□ -0.15
PCDHGB3-201ENST00000576222 GPC5P78333 572 aa14.11□□□□□ -0.15
PCDHGB3-201ENST00000576222 GLYCTKQ8IVS8 523 aa14.11□□□□□ -0.15
PCDHGB3-201ENST00000576222 MSL3Q8N5Y2 521 aaKnown RBP14.11□□□□□ -0.15
PCDHGB3-201ENST00000576222 ANKS1AQ92625 1134 aa14.11□□□□□ -0.15
PCDHGB3-201ENST00000576222 ABTB1Q969K4 478 aaPredicted RBP14.11□□□□□ -0.15
PCDHGB3-201ENST00000576222 BHMT2Q9H2M3 363 aa14.11□□□□□ -0.15
PCDHGB3-201ENST00000576222 PARVGQ9HBI0 331 aa14.11□□□□□ -0.15
PCDHGB3-201ENST00000576222 SAYSD1Q9NPB0 183 aa14.11□□□□□ -0.15
PCDHGB3-201ENST00000576222 ARL1P40616 181 aaPredicted RBP14.11□□□□□ -0.15
PCDHGB3-201ENST00000576222 MXI1P50539 228 aa14.11□□□□□ -0.15
PCDHGB3-201ENST00000576222 FAM102BQ5T8I3 360 aa14.11□□□□□ -0.15
PCDHGB3-201ENST00000576222 TTBK2Q6IQ55 1244 aa14.11□□□□□ -0.15
PCDHGB3-201ENST00000576222 MDM1Q8TC05 714 aa14.11□□□□□ -0.15
PCDHGB3-201ENST00000576222 CALR3Q96L12 384 aaKnown RBP14.11□□□□□ -0.15
PCDHGB3-201ENST00000576222 AMNQ9BXJ7 453 aa14.11□□□□□ -0.15
PCDHGB3-201ENST00000576222 OVOS2A0A0J9YW53 1432 aa14.11□□□□□ -0.15
PCDHGB3-201ENST00000576222 OVOS2Q6IE36 1432 aa14.11□□□□□ -0.15
PCDHGB3-201ENST00000576222 NBPF26B4DH59 902 aa14.1□□□□□ -0.15
PCDHGB3-201ENST00000576222 SLFN13Q68D06 897 aa14.1□□□□□ -0.15
PCDHGB3-201ENST00000576222 NBPF15Q8N660 670 aa14.1□□□□□ -0.15
PCDHGB3-201ENST00000576222 TMEM47Q9BQJ4 181 aa14.1□□□□□ -0.15
PCDHGB3-201ENST00000576222 THRAP3Q9Y2W1 955 aaKnown RBP14.1□□□□□ -0.15
PCDHGB3-201ENST00000576222 XDHP47989 1333 aa14.1□□□□□ -0.15
PCDHGB3-201ENST00000576222 SFR1Q86XK3 245 aa14.1□□□□□ -0.15
PCDHGB3-201ENST00000576222 KIF2BQ8N4N8 673 aa14.1□□□□□ -0.15
PCDHGB3-201ENST00000576222 RAPGEF5Q92565 580 aa14.1□□□□□ -0.15
PCDHGB3-201ENST00000576222 RBM17Q96I25 401 aaKnown RBP14.1□□□□□ -0.15
PCDHGB3-201ENST00000576222 EHD4Q9H223 541 aa14.1□□□□□ -0.15
PCDHGB3-201ENST00000576222 AXIN2Q9Y2T1 843 aa14.1□□□□□ -0.15
PCDHGB3-201ENST00000576222 ADGRB1O14514 1584 aa14.1□□□□□ -0.15
PCDHGB3-201ENST00000576222 WDR17Q8IZU2 1322 aa14.1□□□□□ -0.15
PCDHGB3-201ENST00000576222 ERVV-1B6SEH8 477 aa14.1□□□□□ -0.15
PCDHGB3-201ENST00000576222 HAUS5O94927 633 aa14.1□□□□□ -0.15
PCDHGB3-201ENST00000576222 SARSP49591 514 aaKnown RBP14.1□□□□□ -0.15
PCDHGB3-201ENST00000576222 CAV1Q03135 178 aa14.1□□□□□ -0.15
PCDHGB3-201ENST00000576222 ZYXQ15942 572 aaKnown RBP14.1□□□□□ -0.15
PCDHGB3-201ENST00000576222 NSMFQ6X4W1 530 aa14.1□□□□□ -0.15
PCDHGB3-201ENST00000576222 CAVIN3Q969G5 261 aa14.1□□□□□ -0.15
PCDHGB3-201ENST00000576222 CAMSAP1Q5T5Y3 1602 aa14.1□□□□□ -0.15
PCDHGB3-201ENST00000576222 TOM1O60784 492 aa14.1□□□□□ -0.15
PCDHGB3-201ENST00000576222 DRAP1Q14919 205 aaPredicted RBP14.1□□□□□ -0.15
PCDHGB3-201ENST00000576222 CENPUQ71F23 418 aa14.1□□□□□ -0.15
PCDHGB3-201ENST00000576222 MAML1Q92585 1016 aa14.1□□□□□ -0.15
PCDHGB3-201ENST00000576222 DYDC2Q96IM9 177 aa14.1□□□□□ -0.15
PCDHGB3-201ENST00000576222 DCTN4Q9UJW0 460 aa14.1□□□□□ -0.15
PCDHGB3-201ENST00000576222 STK10O94804 968 aaKnown RBP14.09□□□□□ -0.15
Retrieved 100 of 20,778 RNA–protein pairs in 26.9 ms