RNA–Protein interactions for RNA: ENST00000576218.5

SMG6-220, Transcript of SMG6, nonsense mediated mRNA decay factor, humanhuman

TSL 3

Gene SMG6, Length 902 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG6-220ENST00000576218 MYH9P35579 1960 aaKnown RBP17.15■□□□□ 0.34
SMG6-220ENST00000576218 DDX11L8A8MPP1 907 aa17.14■□□□□ 0.33
SMG6-220ENST00000576218 H3BQV1 296 aa17.14■□□□□ 0.33
SMG6-220ENST00000576218 MAGEB2O15479 319 aa17.14■□□□□ 0.33
SMG6-220ENST00000576218 ATP4AP20648 1035 aa17.14■□□□□ 0.33
SMG6-220ENST00000576218 MCM7P33993 719 aa17.14■□□□□ 0.33
SMG6-220ENST00000576218 PSMC5P62195 406 aa17.14■□□□□ 0.33
SMG6-220ENST00000576218 DEFB103AP81534 67 aa17.14■□□□□ 0.33
SMG6-220ENST00000576218 TBC1D8BQ0IIM8 1120 aa17.14■□□□□ 0.33
SMG6-220ENST00000576218 PPP2R5CQ13362 524 aa17.14■□□□□ 0.33
SMG6-220ENST00000576218 MTERF2Q49AM1 385 aa17.14■□□□□ 0.33
SMG6-220ENST00000576218 XKR3Q5GH77 459 aa17.14■□□□□ 0.33
SMG6-220ENST00000576218 CCDC43Q96MW1 224 aaKnown RBP17.14■□□□□ 0.33
SMG6-220ENST00000576218 PPP1R16BQ96T49 567 aa17.14■□□□□ 0.33
SMG6-220ENST00000576218 TTYH1Q9H313 450 aaPredicted RBP17.14■□□□□ 0.33
SMG6-220ENST00000576218 ZSCAN21Q9Y5A6 473 aaPredicted RBP17.14■□□□□ 0.33
SMG6-220ENST00000576218 TET1Q8NFU7 2136 aa17.14■□□□□ 0.33
SMG6-220ENST00000576218 CD2BP2O95400 341 aaKnown RBP17.13■□□□□ 0.33
SMG6-220ENST00000576218 C22orf31O95567 290 aa17.13■□□□□ 0.33
SMG6-220ENST00000576218 CA3P07451 260 aa17.13■□□□□ 0.33
SMG6-220ENST00000576218 MYOGP15173 224 aa17.13■□□□□ 0.33
SMG6-220ENST00000576218 FOSL2P15408 326 aa17.13■□□□□ 0.33
SMG6-220ENST00000576218 TXKP42681 527 aa17.13■□□□□ 0.33
SMG6-220ENST00000576218 PAK2Q13177 524 aa17.13■□□□□ 0.33
SMG6-220ENST00000576218 TSHZ1Q6ZSZ6 1077 aa17.13■□□□□ 0.33
SMG6-220ENST00000576218 NOSTRINQ8IVI9 506 aa17.13■□□□□ 0.33
SMG6-220ENST00000576218 GAS2L1Q99501 681 aaPredicted RBP17.13■□□□□ 0.33
SMG6-220ENST00000576218 CELF4Q9BZC1 486 aaKnown RBP17.13■□□□□ 0.33
SMG6-220ENST00000576218 SUGCTQ9HAC7 445 aa17.13■□□□□ 0.33
SMG6-220ENST00000576218 VAV3Q9UKW4 847 aa17.13■□□□□ 0.33
SMG6-220ENST00000576218 PCDHA12Q9UN75 941 aa17.13■□□□□ 0.33
SMG6-220ENST00000576218 YBX2Q9Y2T7 364 aaKnown RBP17.13■□□□□ 0.33
SMG6-220ENST00000576218 LAMA2P24043 3122 aaKnown RBP17.13■□□□□ 0.33
SMG6-220ENST00000576218 SZT2Q5T011 3432 aa17.12■□□□□ 0.33
SMG6-220ENST00000576218 ZNF862O60290 1169 aa17.12■□□□□ 0.33
SMG6-220ENST00000576218 GJB2P29033 226 aa17.12■□□□□ 0.33
SMG6-220ENST00000576218 QARSP47897 775 aaKnown RBP17.12■□□□□ 0.33
SMG6-220ENST00000576218 CLCN3P51790 818 aa17.12■□□□□ 0.33
SMG6-220ENST00000576218 MGAT3Q09327 533 aa17.12■□□□□ 0.33
SMG6-220ENST00000576218 LPIN1Q14693 890 aa17.12■□□□□ 0.33
SMG6-220ENST00000576218 TCTN1Q2MV58 587 aa17.12■□□□□ 0.33
SMG6-220ENST00000576218 FBXO47Q5MNV8 452 aa17.12■□□□□ 0.33
SMG6-220ENST00000576218 EFCAB12Q6NXP0 572 aa17.12■□□□□ 0.33
SMG6-220ENST00000576218 TMCO2Q7Z6W1 182 aaPredicted RBP17.12■□□□□ 0.33
SMG6-220ENST00000576218 USP38Q8NB14 1042 aa17.12■□□□□ 0.33
SMG6-220ENST00000576218 MYLIPQ8WY64 445 aa17.12■□□□□ 0.33
SMG6-220ENST00000576218 HAS1Q92839 578 aa17.12■□□□□ 0.33
SMG6-220ENST00000576218 GUCD1Q96NT3 240 aa17.12■□□□□ 0.33
SMG6-220ENST00000576218 CDX2Q99626 313 aaPredicted RBP17.12■□□□□ 0.33
SMG6-220ENST00000576218 ZBTB42B2RXF5 422 aa17.11■□□□□ 0.33
SMG6-220ENST00000576218 EML1O00423 815 aa17.11■□□□□ 0.33
SMG6-220ENST00000576218 UPP2O95045 317 aa17.11■□□□□ 0.33
SMG6-220ENST00000576218 VTNP04004 478 aa17.11■□□□□ 0.33
SMG6-220ENST00000576218 P4HBP07237 508 aaKnown RBP17.11■□□□□ 0.33
SMG6-220ENST00000576218 IBSPP21815 317 aaPredicted RBP17.11■□□□□ 0.33
SMG6-220ENST00000576218 CD52P31358 61 aa17.11■□□□□ 0.33
SMG6-220ENST00000576218 DNM2P50570 870 aa17.11■□□□□ 0.33
SMG6-220ENST00000576218 CYP4A11Q02928 519 aa17.11■□□□□ 0.33
SMG6-220ENST00000576218 ZNF174Q15697 407 aa17.11■□□□□ 0.33
SMG6-220ENST00000576218 TTC38Q5R3I4 469 aa17.11■□□□□ 0.33
SMG6-220ENST00000576218 ODR4Q5SWX8 454 aa17.11■□□□□ 0.33
SMG6-220ENST00000576218 LIN28BQ6ZN17 250 aaKnown RBP eCLIP17.11■□□□□ 0.33
SMG6-220ENST00000576218 LRRC71Q8N4P6 559 aa17.11■□□□□ 0.33
SMG6-220ENST00000576218 LXNQ9BS40 222 aa17.11■□□□□ 0.33
SMG6-220ENST00000576218 TTC12Q9H892 705 aaPredicted RBP17.11■□□□□ 0.33
SMG6-220ENST00000576218 STXBP5LQ9Y2K9 1186 aa17.11■□□□□ 0.33
SMG6-220ENST00000576218 NFX1Q12986 1120 aaKnown RBP17.1■□□□□ 0.33
SMG6-220ENST00000576218 GRIN2CQ14957 1233 aa17.1■□□□□ 0.33
SMG6-220ENST00000576218 EPHA7Q15375 998 aa17.1■□□□□ 0.33
SMG6-220ENST00000576218 KIZQ2M2Z5 673 aa17.1■□□□□ 0.33
SMG6-220ENST00000576218 TMEM266Q2M3C6 531 aa17.1■□□□□ 0.33
SMG6-220ENST00000576218 B3GNT9Q6UX72 402 aa17.1■□□□□ 0.33
SMG6-220ENST00000576218 TPH2Q8IWU9 490 aa17.1■□□□□ 0.33
SMG6-220ENST00000576218 KIAA0319LQ8IZA0 1049 aa17.1■□□□□ 0.33
SMG6-220ENST00000576218 DYDC2Q96IM9 177 aa17.1■□□□□ 0.33
SMG6-220ENST00000576218 YME1L1Q96TA2 773 aa17.1■□□□□ 0.33
SMG6-220ENST00000576218 RAD9AQ99638 391 aa17.1■□□□□ 0.33
SMG6-220ENST00000576218 JPH2Q9BR39 696 aaPredicted RBP17.1■□□□□ 0.33
SMG6-220ENST00000576218 SH2D3AQ9BRG2 576 aa17.1■□□□□ 0.33
SMG6-220ENST00000576218 OSBPL7Q9BZF2 842 aa17.1■□□□□ 0.33
SMG6-220ENST00000576218 PRDM12Q9H4Q4 367 aa17.1■□□□□ 0.33
SMG6-220ENST00000576218 TMEM150BA6NC51 233 aa17.09■□□□□ 0.33
SMG6-220ENST00000576218 RPS6KA5O75582 802 aa17.09■□□□□ 0.33
SMG6-220ENST00000576218 GJB5O95377 273 aa17.09■□□□□ 0.33
SMG6-220ENST00000576218 OR52Z1P0C646 297 aa17.09■□□□□ 0.33
SMG6-220ENST00000576218 TRAPPC10P48553 1259 aa17.09■□□□□ 0.33
SMG6-220ENST00000576218 ORC2Q13416 577 aaPredicted RBP17.09■□□□□ 0.33
SMG6-220ENST00000576218 CTTNQ14247 550 aaKnown RBP17.09■□□□□ 0.33
SMG6-220ENST00000576218 PLA2G4FQ68DD2 849 aa17.09■□□□□ 0.33
SMG6-220ENST00000576218 OTUD6AQ7L8S5 288 aa17.09■□□□□ 0.33
SMG6-220ENST00000576218 NLRP7Q8WX94 980 aa17.09■□□□□ 0.33
SMG6-220ENST00000576218 SLC7A3Q8WY07 619 aa17.09■□□□□ 0.33
SMG6-220ENST00000576218 CEP170P1Q96L14 293 aa17.09■□□□□ 0.33
SMG6-220ENST00000576218 OSMRQ99650 979 aa17.09■□□□□ 0.33
SMG6-220ENST00000576218 FTHL17Q9BXU8 183 aa17.09■□□□□ 0.33
SMG6-220ENST00000576218 ZSWIM4Q9H7M6 989 aa17.09■□□□□ 0.33
SMG6-220ENST00000576218 CERS4Q9HA82 394 aa17.09■□□□□ 0.33
SMG6-220ENST00000576218 SQORQ9Y6N5 450 aa17.09■□□□□ 0.33
SMG6-220ENST00000576218 GBF1Q92538 1859 aa17.09■□□□□ 0.33
SMG6-220ENST00000576218 KDM3AQ9Y4C1 1321 aa17.08■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 18.1 ms