RNA–Protein interactions for RNA: ENST00000574848.5

LITAF-216, Transcript of lipopolysaccharide induced TNF factor, humanhuman

TSL 4

Gene LITAF, Length 554 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LITAF-216ENST00000574848 SPRED2Q7Z698 418 aa11.95□□□□□ -0.5
LITAF-216ENST00000574848 MYOCDQ8IZQ8 938 aa11.95□□□□□ -0.5
LITAF-216ENST00000574848 NME8Q8N427 588 aa11.95□□□□□ -0.5
LITAF-216ENST00000574848 FAM184AQ8NB25 1140 aa11.95□□□□□ -0.5
LITAF-216ENST00000574848 TBCKQ8TEA7 893 aa11.95□□□□□ -0.5
LITAF-216ENST00000574848 TRAPPC12Q8WVT3 735 aa11.95□□□□□ -0.5
LITAF-216ENST00000574848 SLC5A5Q92911 643 aa11.95□□□□□ -0.5
LITAF-216ENST00000574848 LARP6Q9BRS8 491 aaKnown RBP11.95□□□□□ -0.5
LITAF-216ENST00000574848 ZBED2Q9BTP6 218 aa11.95□□□□□ -0.5
LITAF-216ENST00000574848 PHF20Q9BVI0 1012 aa11.95□□□□□ -0.5
LITAF-216ENST00000574848 RC3H2Q9HBD1 1191 aaKnown RBP11.95□□□□□ -0.5
LITAF-216ENST00000574848 ZDHHC9Q9Y397 364 aa11.95□□□□□ -0.5
LITAF-216ENST00000574848 PCDHA10Q9Y5I2 948 aa11.95□□□□□ -0.5
LITAF-216ENST00000574848 TRPV2Q9Y5S1 764 aa11.95□□□□□ -0.5
LITAF-216ENST00000574848 MTCH2Q9Y6C9 303 aa11.95□□□□□ -0.5
LITAF-216ENST00000574848 CDY2AQ9Y6F7 541 aa11.95□□□□□ -0.5
LITAF-216ENST00000574848 LOXHD1Q8IVV2 1947 aa11.94□□□□□ -0.5
LITAF-216ENST00000574848 VCANP13611 3396 aa11.94□□□□□ -0.5
LITAF-216ENST00000574848 WDR64B1ANS9 1081 aa11.94□□□□□ -0.5
LITAF-216ENST00000574848 RBAK-RBAKDNI3L0D1 243 aa11.94□□□□□ -0.5
LITAF-216ENST00000574848 DLL1O00548 723 aa11.94□□□□□ -0.5
LITAF-216ENST00000574848 BACH1O14867 736 aa11.94□□□□□ -0.5
LITAF-216ENST00000574848 CTDNEP1O95476 244 aa11.94□□□□□ -0.5
LITAF-216ENST00000574848 F13A1P00488 732 aa11.94□□□□□ -0.5
LITAF-216ENST00000574848 PSAPP07602 524 aa11.94□□□□□ -0.5
LITAF-216ENST00000574848 IGFBP4P22692 258 aa11.94□□□□□ -0.5
LITAF-216ENST00000574848 DEKP35659 375 aaKnown RBP11.94□□□□□ -0.5
LITAF-216ENST00000574848 KLHL40Q2TBA0 621 aa11.94□□□□□ -0.5
LITAF-216ENST00000574848 ZNF484Q5JVG2 852 aa11.94□□□□□ -0.5
LITAF-216ENST00000574848 IER5Q5VY09 327 aa11.94□□□□□ -0.5
LITAF-216ENST00000574848 PDXDC2PQ6P474 469 aa11.94□□□□□ -0.5
LITAF-216ENST00000574848 B3GNT9Q6UX72 402 aa11.94□□□□□ -0.5
LITAF-216ENST00000574848 NECAB1Q8N987 351 aa11.94□□□□□ -0.5
LITAF-216ENST00000574848 RDM1Q8NG50 284 aa11.94□□□□□ -0.5
LITAF-216ENST00000574848 BBXQ8WY36 941 aaPredicted RBP11.94□□□□□ -0.5
LITAF-216ENST00000574848 ARNTL2Q8WYA1 636 aa11.94□□□□□ -0.5
LITAF-216ENST00000574848 ZBTB10Q96DT7 871 aa11.94□□□□□ -0.5
LITAF-216ENST00000574848 FAM167AQ96KS9 214 aa11.94□□□□□ -0.5
LITAF-216ENST00000574848 AIFM3Q96NN9 605 aa11.94□□□□□ -0.5
LITAF-216ENST00000574848 TGS1Q96RS0 853 aaKnown RBP11.94□□□□□ -0.5
LITAF-216ENST00000574848 COL25A1Q9BXS0 654 aaPredicted RBP11.94□□□□□ -0.5
LITAF-216ENST00000574848 LMCD1Q9NZU5 365 aa11.94□□□□□ -0.5
LITAF-216ENST00000574848 THEGQ9P2T0 379 aa11.94□□□□□ -0.5
LITAF-216ENST00000574848 TCEAL9Q9UHQ7 104 aa11.94□□□□□ -0.5
LITAF-216ENST00000574848 SPTBN5Q9NRC6 3674 aaKnown RBP11.94□□□□□ -0.5
LITAF-216ENST00000574848 TTC3P53804 2025 aa11.94□□□□□ -0.5
LITAF-216ENST00000574848 VPS37CA5D8V6 355 aaPredicted RBP11.93□□□□□ -0.5
LITAF-216ENST00000574848 M0QZ92 97 aa11.93□□□□□ -0.5
LITAF-216ENST00000574848 GTPBP6O43824 516 aaPredicted RBP11.93□□□□□ -0.5
LITAF-216ENST00000574848 PSMD10O75832 226 aa11.93□□□□□ -0.5
LITAF-216ENST00000574848 C22orf31O95567 290 aa11.93□□□□□ -0.5
LITAF-216ENST00000574848 SFNP31947 248 aa11.93□□□□□ -0.5
LITAF-216ENST00000574848 JAK3P52333 1124 aa11.93□□□□□ -0.5
LITAF-216ENST00000574848 GRB10Q13322 594 aa11.93□□□□□ -0.5
LITAF-216ENST00000574848 NONOQ15233 471 aaKnown RBP eCLIP11.93□□□□□ -0.5
LITAF-216ENST00000574848 SWSAP1Q6NVH7 229 aa11.93□□□□□ -0.5
LITAF-216ENST00000574848 KRT25Q7Z3Z0 450 aa11.93□□□□□ -0.5
LITAF-216ENST00000574848 LINC01465Q8N7H1 131 aa11.93□□□□□ -0.5
LITAF-216ENST00000574848 ETNPPLQ8TBG4 499 aa11.93□□□□□ -0.5
LITAF-216ENST00000574848 ATXN2LQ8WWM7 1075 aaKnown RBP11.93□□□□□ -0.5
LITAF-216ENST00000574848 LINC01599Q8WXQ3 324 aa11.93□□□□□ -0.5
LITAF-216ENST00000574848 SAMD11Q96NU1 681 aa11.93□□□□□ -0.5
LITAF-216ENST00000574848 FAM49AQ9H0Q0 323 aaPredicted RBP11.93□□□□□ -0.5
LITAF-216ENST00000574848 AGO3Q9H9G7 860 aaKnown RBP11.93□□□□□ -0.5
LITAF-216ENST00000574848 CERS4Q9HA82 394 aa11.93□□□□□ -0.5
LITAF-216ENST00000574848 CEP131Q9UPN4 1083 aa11.93□□□□□ -0.5
LITAF-216ENST00000574848 PRRC2BQ5JSZ5 2229 aaKnown RBP11.92□□□□□ -0.5
LITAF-216ENST00000574848 H3BQV1 296 aa11.92□□□□□ -0.5
LITAF-216ENST00000574848 RFXAPO00287 272 aa11.92□□□□□ -0.5
LITAF-216ENST00000574848 GAS7O60861 476 aa11.92□□□□□ -0.5
LITAF-216ENST00000574848 TDP2O95551 362 aa11.92□□□□□ -0.5
LITAF-216ENST00000574848 XBP1P17861 261 aa11.92□□□□□ -0.5
LITAF-216ENST00000574848 KLRC1P26715 233 aa11.92□□□□□ -0.5
LITAF-216ENST00000574848 TJAP1Q5JTD0 557 aa11.92□□□□□ -0.5
LITAF-216ENST00000574848 L1TD1Q5T7N2 865 aaKnown RBP11.92□□□□□ -0.5
LITAF-216ENST00000574848 LRCH2Q5VUJ6 765 aa11.92□□□□□ -0.5
LITAF-216ENST00000574848 KIAA0319LQ8IZA0 1049 aa11.92□□□□□ -0.5
LITAF-216ENST00000574848 CRIPAKQ8N1N5 446 aa11.92□□□□□ -0.5
LITAF-216ENST00000574848 SYAP1Q96A49 352 aaPredicted RBP11.92□□□□□ -0.5
LITAF-216ENST00000574848 TEKT3Q9BXF9 490 aa11.92□□□□□ -0.5
LITAF-216ENST00000574848 FTHL17Q9BXU8 183 aa11.92□□□□□ -0.5
LITAF-216ENST00000574848 CELF4Q9BZC1 486 aaKnown RBP11.92□□□□□ -0.5
LITAF-216ENST00000574848 UNC45AQ9H3U1 944 aa11.92□□□□□ -0.5
LITAF-216ENST00000574848 SUGCTQ9HAC7 445 aa11.92□□□□□ -0.5
LITAF-216ENST00000574848 PRDM6Q9NQX0 595 aa11.92□□□□□ -0.5
LITAF-216ENST00000574848 DISC1Q9NRI5 854 aa11.92□□□□□ -0.5
LITAF-216ENST00000574848 GABBR1Q9UBS5 961 aa11.92□□□□□ -0.5
LITAF-216ENST00000574848 ADGRA3Q8IWK6 1321 aa11.91□□□□□ -0.5
LITAF-216ENST00000574848 KIAA1671Q9BY89 1806 aa11.91□□□□□ -0.5
LITAF-216ENST00000574848 ZNF862O60290 1169 aa11.91□□□□□ -0.5
LITAF-216ENST00000574848 OATP04181 439 aa11.91□□□□□ -0.5
LITAF-216ENST00000574848 LINC00271P0C7V0 271 aa11.91□□□□□ -0.5
LITAF-216ENST00000574848 FDPSP14324 419 aaKnown RBP11.91□□□□□ -0.5
LITAF-216ENST00000574848 GCFC2P16383 781 aaKnown RBP11.91□□□□□ -0.5
LITAF-216ENST00000574848 CD52P31358 61 aa11.91□□□□□ -0.5
LITAF-216ENST00000574848 PRKCEQ02156 737 aa11.91□□□□□ -0.5
LITAF-216ENST00000574848 ST3GAL1Q11201 340 aa11.91□□□□□ -0.5
LITAF-216ENST00000574848 FOXD4L5Q5VV16 416 aaPredicted RBP11.91□□□□□ -0.5
LITAF-216ENST00000574848 PPP4R3AQ6IN85 833 aa11.91□□□□□ -0.5
LITAF-216ENST00000574848 FAM117BQ6P1L5 589 aa11.91□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 57.8 ms