RNA–Protein interactions for RNA: ENST00000574095.1

NPLOC4-215, Transcript of NPL4 homolog, ubiquitin recognition factor, humanhuman

TSL 3

Gene NPLOC4, Length 277 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPLOC4-215ENST00000574095 ORC3Q9UBD5 711 aaPredicted RBP29.44■■■□□ 2.3
NPLOC4-215ENST00000574095 SQORQ9Y6N5 450 aa29.44■■■□□ 2.3
NPLOC4-215ENST00000574095 XBP1P17861 261 aa29.43■■■□□ 2.3
NPLOC4-215ENST00000574095 KIAA0319LQ8IZA0 1049 aa29.43■■■□□ 2.3
NPLOC4-215ENST00000574095 THEGQ9P2T0 379 aa29.43■■■□□ 2.3
NPLOC4-215ENST00000574095 PADI3Q9ULW8 664 aa29.43■■■□□ 2.3
NPLOC4-215ENST00000574095 GINS2Q9Y248 185 aa29.43■■■□□ 2.3
NPLOC4-215ENST00000574095 IGSF9BQ9UPX0 1349 aa29.43■■■□□ 2.3
NPLOC4-215ENST00000574095 VCANP13611 3396 aa29.42■■■□□ 2.3
NPLOC4-215ENST00000574095 PSMD10O75832 226 aa29.42■■■□□ 2.3
NPLOC4-215ENST00000574095 C22orf31O95567 290 aa29.41■■■□□ 2.3
NPLOC4-215ENST00000574095 FDPSP14324 419 aaKnown RBP29.41■■■□□ 2.3
NPLOC4-215ENST00000574095 SKIV2LQ15477 1246 aaKnown RBP29.41■■■□□ 2.3
NPLOC4-215ENST00000574095 RTN4RL1Q86UN2 441 aaPredicted RBP29.41■■■□□ 2.3
NPLOC4-215ENST00000574095 OXER1Q8TDS5 423 aa29.41■■■□□ 2.3
NPLOC4-215ENST00000574095 LINC01599Q8WXQ3 324 aa29.41■■■□□ 2.3
NPLOC4-215ENST00000574095 GTF3C6Q969F1 213 aa29.41■■■□□ 2.3
NPLOC4-215ENST00000574095 MBOAT7Q96N66 472 aa29.41■■■□□ 2.3
NPLOC4-215ENST00000574095 CDHR5Q9HBB8 845 aa29.41■■■□□ 2.3
NPLOC4-215ENST00000574095 KDM3AQ9Y4C1 1321 aa29.41■■■□□ 2.3
NPLOC4-215ENST00000574095 CCDC194A0A1B0GVG4 234 aa29.4■■■□□ 2.3
NPLOC4-215ENST00000574095 ZNF862O60290 1169 aa29.4■■■□□ 2.3
NPLOC4-215ENST00000574095 SFNP31947 248 aa29.4■■■□□ 2.3
NPLOC4-215ENST00000574095 PAK2Q13177 524 aa29.4■■■□□ 2.3
NPLOC4-215ENST00000574095 UGCGQ16739 394 aa29.4■■■□□ 2.3
NPLOC4-215ENST00000574095 TMEM266Q2M3C6 531 aa29.4■■■□□ 2.3
NPLOC4-215ENST00000574095 LETM2Q2VYF4 491 aa29.4■■■□□ 2.3
NPLOC4-215ENST00000574095 MOXD1Q6UVY6 613 aa29.4■■■□□ 2.3
NPLOC4-215ENST00000574095 METTL13Q8N6R0 699 aa29.4■■■□□ 2.3
NPLOC4-215ENST00000574095 FAM167AQ96KS9 214 aa29.4■■■□□ 2.3
NPLOC4-215ENST00000574095 PPP1R16BQ96T49 567 aa29.4■■■□□ 2.3
NPLOC4-215ENST00000574095 TSPYL2Q9H2G4 693 aaPredicted RBP29.4■■■□□ 2.3
NPLOC4-215ENST00000574095 DDX25Q9UHL0 483 aaKnown RBP29.4■■■□□ 2.3
NPLOC4-215ENST00000574095 CEP131Q9UPN4 1083 aa29.4■■■□□ 2.3
NPLOC4-215ENST00000574095 TTC3P53804 2025 aa29.39■■■□□ 2.3
NPLOC4-215ENST00000574095 JAK3P52333 1124 aa29.39■■■□□ 2.3
NPLOC4-215ENST00000574095 TJAP1Q5JTD0 557 aa29.39■■■□□ 2.3
NPLOC4-215ENST00000574095 MIER3Q7Z3K6 550 aa29.39■■■□□ 2.3
NPLOC4-215ENST00000574095 FBXO22Q8NEZ5 403 aa29.39■■■□□ 2.3
NPLOC4-215ENST00000574095 ETNPPLQ8TBG4 499 aa29.39■■■□□ 2.3
NPLOC4-215ENST00000574095 ATXN2LQ8WWM7 1075 aaKnown RBP29.39■■■□□ 2.3
NPLOC4-215ENST00000574095 WASF1Q92558 559 aa29.39■■■□□ 2.3
NPLOC4-215ENST00000574095 NRBP2Q9NSY0 501 aa29.39■■■□□ 2.3
NPLOC4-215ENST00000574095 SLC37A4O43826 429 aa29.38■■■□□ 2.29
NPLOC4-215ENST00000574095 OATP04181 439 aa29.38■■■□□ 2.29
NPLOC4-215ENST00000574095 PRKCEQ02156 737 aa29.38■■■□□ 2.29
NPLOC4-215ENST00000574095 NFX1Q12986 1120 aaKnown RBP29.38■■■□□ 2.29
NPLOC4-215ENST00000574095 PIK3AP1Q6ZUJ8 805 aa29.38■■■□□ 2.29
NPLOC4-215ENST00000574095 FTHL17Q9BXU8 183 aa29.38■■■□□ 2.29
NPLOC4-215ENST00000574095 NLRC5Q86WI3 1866 aa29.38■■■□□ 2.29
NPLOC4-215ENST00000574095 VTNP04004 478 aa29.37■■■□□ 2.29
NPLOC4-215ENST00000574095 EPC2Q52LR7 807 aa29.37■■■□□ 2.29
NPLOC4-215ENST00000574095 B3GNT9Q6UX72 402 aa29.37■■■□□ 2.29
NPLOC4-215ENST00000574095 TMX1Q9H3N1 280 aa29.37■■■□□ 2.29
NPLOC4-215ENST00000574095 LMCD1Q9NZU5 365 aa29.37■■■□□ 2.29
NPLOC4-215ENST00000574095 NOC2LQ9Y3T9 749 aaKnown RBP29.37■■■□□ 2.29
NPLOC4-215ENST00000574095 CLCN3P51790 818 aa29.36■■■□□ 2.29
NPLOC4-215ENST00000574095 KIZQ2M2Z5 673 aa29.36■■■□□ 2.29
NPLOC4-215ENST00000574095 EARS2Q5JPH6 523 aaKnown RBP29.36■■■□□ 2.29
NPLOC4-215ENST00000574095 EFCAB12Q6NXP0 572 aa29.36■■■□□ 2.29
NPLOC4-215ENST00000574095 NEK8Q86SG6 692 aa29.36■■■□□ 2.29
NPLOC4-215ENST00000574095 FIBCD1Q8N539 461 aa29.36■■■□□ 2.29
NPLOC4-215ENST00000574095 NSUN7Q8NE18 718 aaKnown RBP29.36■■■□□ 2.29
NPLOC4-215ENST00000574095 RDM1Q8NG50 284 aa29.36■■■□□ 2.29
NPLOC4-215ENST00000574095 TMEM40Q8WWA1 233 aa29.36■■■□□ 2.29
NPLOC4-215ENST00000574095 SYMPKQ92797 1274 aaKnown RBP29.36■■■□□ 2.29
NPLOC4-215ENST00000574095 SAMD11Q96NU1 681 aa29.36■■■□□ 2.29
NPLOC4-215ENST00000574095 ASB2Q96Q27 587 aa29.36■■■□□ 2.29
NPLOC4-215ENST00000574095 MAGEB2O15479 319 aa29.35■■■□□ 2.29
NPLOC4-215ENST00000574095 RPS6KA5O75582 802 aa29.35■■■□□ 2.29
NPLOC4-215ENST00000574095 MRPS5P82675 430 aaKnown RBP29.35■■■□□ 2.29
NPLOC4-215ENST00000574095 TMEM192Q8IY95 271 aa29.35■■■□□ 2.29
NPLOC4-215ENST00000574095 LRRC71Q8N4P6 559 aa29.35■■■□□ 2.29
NPLOC4-215ENST00000574095 OSMRQ99650 979 aa29.35■■■□□ 2.29
NPLOC4-215ENST00000574095 COL4A6Q14031 1691 aa29.34■■■□□ 2.29
NPLOC4-215ENST00000574095 CCNT1O60563 726 aaKnown RBP29.34■■■□□ 2.29
NPLOC4-215ENST00000574095 JAK2O60674 1132 aa29.34■■■□□ 2.29
NPLOC4-215ENST00000574095 TFF2Q03403 129 aa29.34■■■□□ 2.29
NPLOC4-215ENST00000574095 PPP4R3AQ6IN85 833 aa29.34■■■□□ 2.29
NPLOC4-215ENST00000574095 RC3H2Q9HBD1 1191 aaKnown RBP29.34■■■□□ 2.29
NPLOC4-215ENST00000574095 ERVK-5Q9HDB9 667 aa29.34■■■□□ 2.29
NPLOC4-215ENST00000574095 CUL9Q8IWT3 2517 aa29.34■■■□□ 2.29
NPLOC4-215ENST00000574095 FAM205CA6NFA0 338 aa29.33■■■□□ 2.29
NPLOC4-215ENST00000574095 GPR32O75388 356 aa29.33■■■□□ 2.29
NPLOC4-215ENST00000574095 KRT2P35908 639 aa29.33■■■□□ 2.29
NPLOC4-215ENST00000574095 FOSBP53539 338 aa29.33■■■□□ 2.29
NPLOC4-215ENST00000574095 CRYBB1P53674 252 aaPredicted RBP29.33■■■□□ 2.29
NPLOC4-215ENST00000574095 NR5A1Q13285 461 aa29.33■■■□□ 2.29
NPLOC4-215ENST00000574095 ZNF689Q96CS4 500 aaPredicted RBP29.33■■■□□ 2.29
NPLOC4-215ENST00000574095 ST3GAL5Q9UNP4 418 aa29.33■■■□□ 2.29
NPLOC4-215ENST00000574095 AKT3Q9Y243 479 aa29.33■■■□□ 2.29
NPLOC4-215ENST00000574095 RALGAPA2Q2PPJ7 1873 aa29.33■■■□□ 2.29
NPLOC4-215ENST00000574095 ADGRA3Q8IWK6 1321 aa29.32■■■□□ 2.28
NPLOC4-215ENST00000574095 DGKIO75912 1065 aa29.32■■■□□ 2.28
NPLOC4-215ENST00000574095 IBSPP21815 317 aaPredicted RBP29.32■■■□□ 2.28
NPLOC4-215ENST00000574095 ST3GAL1Q11201 340 aa29.32■■■□□ 2.28
NPLOC4-215ENST00000574095 GPM6BQ13491 265 aa29.32■■■□□ 2.28
NPLOC4-215ENST00000574095 CRIPAKQ8N1N5 446 aa29.32■■■□□ 2.28
NPLOC4-215ENST00000574095 LINC01465Q8N7H1 131 aa29.32■■■□□ 2.28
NPLOC4-215ENST00000574095 KCNMB3Q9NPA1 279 aa29.32■■■□□ 2.28
Retrieved 100 of 20,778 RNA–protein pairs in 18.9 ms