RNA–Protein interactions for RNA: ENST00000573852.5

SCARF1-206, Transcript of scavenger receptor class F member 1, humanhuman

TSL 1 (best)

Gene SCARF1, Length 2,698 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARF1-206ENST00000573852 RIMBP2O15034 1052 aa20.81■□□□□ 0.92
SCARF1-206ENST00000573852 CALUO43852 315 aaPredicted RBP20.81■□□□□ 0.92
SCARF1-206ENST00000573852 H2AFZP0C0S5 128 aa20.81■□□□□ 0.92
SCARF1-206ENST00000573852 ARHGAP4P98171 946 aa20.81■□□□□ 0.92
SCARF1-206ENST00000573852 KCNA1Q09470 495 aa20.81■□□□□ 0.92
SCARF1-206ENST00000573852 H2AFVQ71UI9 128 aa20.81■□□□□ 0.92
SCARF1-206ENST00000573852 CRYGNQ8WXF5 182 aa20.81■□□□□ 0.92
SCARF1-206ENST00000573852 SLC35C1Q96A29 364 aa20.81■□□□□ 0.92
SCARF1-206ENST00000573852 MXD3Q9BW11 206 aa20.81■□□□□ 0.92
SCARF1-206ENST00000573852 CLIC2O15247 247 aa20.8■□□□□ 0.92
SCARF1-206ENST00000573852 NR3C1P04150 777 aa20.8■□□□□ 0.92
SCARF1-206ENST00000573852 RPA1P27694 616 aa20.8■□□□□ 0.92
SCARF1-206ENST00000573852 CTNNA1P35221 906 aaKnown RBP20.8■□□□□ 0.92
SCARF1-206ENST00000573852 SHROOM1Q2M3G4 852 aaPredicted RBP20.8■□□□□ 0.92
SCARF1-206ENST00000573852 LRRC45Q96CN5 670 aa20.8■□□□□ 0.92
SCARF1-206ENST00000573852 FBXL5Q9UKA1 691 aa20.8■□□□□ 0.92
SCARF1-206ENST00000573852 MYO3BQ8WXR4 1341 aa20.8■□□□□ 0.92
SCARF1-206ENST00000573852 E7EVH7 732 aa20.8■□□□□ 0.92
SCARF1-206ENST00000573852 MYO1FO00160 1098 aa20.8■□□□□ 0.92
SCARF1-206ENST00000573852 DAPK3O43293 454 aa20.8■□□□□ 0.92
SCARF1-206ENST00000573852 GUCY2CP25092 1073 aa20.8■□□□□ 0.92
SCARF1-206ENST00000573852 RASGEF1CQ8N431 466 aa20.8■□□□□ 0.92
SCARF1-206ENST00000573852 GLT8D2Q9H1C3 349 aa20.8■□□□□ 0.92
SCARF1-206ENST00000573852 GCNT4Q9P109 453 aa20.8■□□□□ 0.92
SCARF1-206ENST00000573852 C10orf71Q711Q0 1435 aa20.79■□□□□ 0.92
SCARF1-206ENST00000573852 BBOX1O75936 387 aa20.79■□□□□ 0.92
SCARF1-206ENST00000573852 FAM107AO95990 144 aa20.79■□□□□ 0.92
SCARF1-206ENST00000573852 NT5DC3Q86UY8 548 aa20.79■□□□□ 0.92
SCARF1-206ENST00000573852 CNPY4Q8N129 248 aa20.79■□□□□ 0.92
SCARF1-206ENST00000573852 U2AF1L4Q8WU68 220 aaKnown RBP20.79■□□□□ 0.92
SCARF1-206ENST00000573852 LENG9Q96B70 501 aa20.79■□□□□ 0.92
SCARF1-206ENST00000573852 PPANQ9NQ55 473 aaKnown RBP20.79■□□□□ 0.92
SCARF1-206ENST00000573852 TYW1Q9NV66 732 aaKnown RBP20.79■□□□□ 0.92
SCARF1-206ENST00000573852 SUCLA2Q9P2R7 463 aaPredicted RBP20.79■□□□□ 0.92
SCARF1-206ENST00000573852 SCNN1DP51172 638 aa20.79■□□□□ 0.92
SCARF1-206ENST00000573852 SNAP25P60880 206 aa20.79■□□□□ 0.92
SCARF1-206ENST00000573852 DAAM2Q86T65 1068 aa20.79■□□□□ 0.92
SCARF1-206ENST00000573852 IKZF4Q9H2S9 585 aa20.79■□□□□ 0.92
SCARF1-206ENST00000573852 GREB1LQ9C091 1923 aaPredicted RBP20.79■□□□□ 0.92
SCARF1-206ENST00000573852 CCDC188H7C350 402 aa20.78■□□□□ 0.92
SCARF1-206ENST00000573852 TTI1O43156 1089 aa20.78■□□□□ 0.92
SCARF1-206ENST00000573852 FSBPO95073 299 aa20.78■□□□□ 0.92
SCARF1-206ENST00000573852 CYP4A11Q02928 519 aa20.78■□□□□ 0.92
SCARF1-206ENST00000573852 MOXD1Q6UVY6 613 aa20.78■□□□□ 0.92
SCARF1-206ENST00000573852 PRPF38AQ8NAV1 312 aaKnown RBP20.78■□□□□ 0.92
SCARF1-206ENST00000573852 OLIG1Q8TAK6 271 aa20.78■□□□□ 0.92
SCARF1-206ENST00000573852 ERMNQ8TAM6 284 aa20.78■□□□□ 0.92
SCARF1-206ENST00000573852 LMBR1Q8WVP7 490 aa20.78■□□□□ 0.92
SCARF1-206ENST00000573852 RUSC1Q9BVN2 902 aa20.78■□□□□ 0.92
SCARF1-206ENST00000573852 CELF4Q9BZC1 486 aaKnown RBP20.78■□□□□ 0.92
SCARF1-206ENST00000573852 SLC12A6Q9UHW9 1150 aa20.78■□□□□ 0.92
SCARF1-206ENST00000573852 A0A0A6YYK5 440 aaPredicted RBP20.78■□□□□ 0.92
SCARF1-206ENST00000573852 FAM86B1E9PN63 330 aa20.78■□□□□ 0.92
SCARF1-206ENST00000573852 GFPT2O94808 682 aa20.78■□□□□ 0.92
SCARF1-206ENST00000573852 FAM86B2P0C5J1 330 aa20.78■□□□□ 0.92
SCARF1-206ENST00000573852 MICALCLQ6ZW33 695 aa20.78■□□□□ 0.92
SCARF1-206ENST00000573852 ZFPM1Q8IX07 1006 aa20.78■□□□□ 0.92
SCARF1-206ENST00000573852 UBLCP1Q8WVY7 318 aaPredicted RBP20.78■□□□□ 0.92
SCARF1-206ENST00000573852 METTL14Q9HCE5 456 aaKnown RBP20.78■□□□□ 0.92
SCARF1-206ENST00000573852 PCDHB13Q9Y5F0 798 aa20.78■□□□□ 0.92
SCARF1-206ENST00000573852 GCNT3O95395 438 aa20.77■□□□□ 0.92
SCARF1-206ENST00000573852 ANXA13P27216 316 aa20.77■□□□□ 0.92
SCARF1-206ENST00000573852 POLD1P28340 1107 aa20.77■□□□□ 0.92
SCARF1-206ENST00000573852 GALCP54803 685 aa20.77■□□□□ 0.92
SCARF1-206ENST00000573852 BMT2Q1RMZ1 405 aa20.77■□□□□ 0.92
SCARF1-206ENST00000573852 CDC42EP5Q6NZY7 148 aa20.77■□□□□ 0.92
SCARF1-206ENST00000573852 YTHDF3Q7Z739 585 aaKnown RBP20.77■□□□□ 0.92
SCARF1-206ENST00000573852 VPS36Q86VN1 386 aa20.77■□□□□ 0.92
SCARF1-206ENST00000573852 ARFGAP2Q8N6H7 521 aa20.77■□□□□ 0.92
SCARF1-206ENST00000573852 LNX1Q8TBB1 728 aaPredicted RBP20.77■□□□□ 0.92
SCARF1-206ENST00000573852 BHMT2Q9H2M3 363 aa20.77■□□□□ 0.92
SCARF1-206ENST00000573852 BCCIPQ9P287 314 aaKnown RBP eCLIP20.77■□□□□ 0.92
SCARF1-206ENST00000573852 SERPINB2P05120 415 aa20.77■□□□□ 0.92
SCARF1-206ENST00000573852 NFIAQ12857 509 aa20.77■□□□□ 0.92
SCARF1-206ENST00000573852 HES6Q96HZ4 224 aa20.77■□□□□ 0.92
SCARF1-206ENST00000573852 DNAJC18Q9H819 358 aa20.77■□□□□ 0.92
SCARF1-206ENST00000573852 FAM196BA6NMK8 535 aa20.76■□□□□ 0.91
SCARF1-206ENST00000573852 SRRM3A6NNA2 597 aaPredicted RBP20.76■□□□□ 0.91
SCARF1-206ENST00000573852 SFI1A8K8P3 1242 aa20.76■□□□□ 0.91
SCARF1-206ENST00000573852 SLC16A3O15427 465 aaKnown RBP20.76■□□□□ 0.91
SCARF1-206ENST00000573852 EEF2P13639 858 aaKnown RBP20.76■□□□□ 0.91
SCARF1-206ENST00000573852 RPL13P26373 211 aaKnown RBP20.76■□□□□ 0.91
SCARF1-206ENST00000573852 TMOD1P28289 359 aa20.76■□□□□ 0.91
SCARF1-206ENST00000573852 IFT88Q13099 833 aa20.76■□□□□ 0.91
SCARF1-206ENST00000573852 AP3B2Q13367 1082 aa20.76■□□□□ 0.91
SCARF1-206ENST00000573852 Q4G0T1 1027 aa20.76■□□□□ 0.91
SCARF1-206ENST00000573852 SLITRK6Q9H5Y7 841 aa20.76■□□□□ 0.91
SCARF1-206ENST00000573852 OSGEPQ9NPF4 335 aa20.76■□□□□ 0.91
SCARF1-206ENST00000573852 NR2E1Q9Y466 385 aa20.76■□□□□ 0.91
SCARF1-206ENST00000573852 ATP8B3O60423 1300 aa20.76■□□□□ 0.91
SCARF1-206ENST00000573852 ADAMTSL1Q8N6G6 1762 aa20.76■□□□□ 0.91
SCARF1-206ENST00000573852 TGFB1I1O43294 461 aa20.76■□□□□ 0.91
SCARF1-206ENST00000573852 RNF187Q5TA31 235 aaPredicted RBP20.76■□□□□ 0.91
SCARF1-206ENST00000573852 MCTP2Q6DN12 878 aa20.76■□□□□ 0.91
SCARF1-206ENST00000573852 TMC3Q7Z5M5 1100 aa20.76■□□□□ 0.91
SCARF1-206ENST00000573852 BORCS6Q96GS4 357 aa20.76■□□□□ 0.91
SCARF1-206ENST00000573852 LRRC4CQ9HCJ2 640 aa20.76■□□□□ 0.91
SCARF1-206ENST00000573852 CNOT8Q9UFF9 292 aaKnown RBP20.76■□□□□ 0.91
SCARF1-206ENST00000573852 INTUQ9ULD6 942 aa20.76■□□□□ 0.91
SCARF1-206ENST00000573852 TBX3O15119 743 aa20.75■□□□□ 0.91
Retrieved 100 of 20,778 RNA–protein pairs in 40.1 ms