RNA–Protein interactions for RNA: ENST00000573474.5

CCDC40-209, Transcript of coiled-coil domain containing 40, humanhuman

TSL 4

Gene CCDC40, Length 554 nt, Biotype nonsense mediated decay.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC40-209ENST00000573474 EMSYQ7Z589 1322 aa15.18■□□□□ 0.02
CCDC40-209ENST00000573474 TMEM150BA6NC51 233 aa15.18■□□□□ 0.02
CCDC40-209ENST00000573474 FKTNO75072 461 aa15.18■□□□□ 0.02
CCDC40-209ENST00000573474 PPFIA4O75335 1185 aa15.18■□□□□ 0.02
CCDC40-209ENST00000573474 FAM13AO94988 1023 aa15.18■□□□□ 0.02
CCDC40-209ENST00000573474 GNRH1P01148 92 aa15.18■□□□□ 0.02
CCDC40-209ENST00000573474 PRCPP42785 496 aa15.18■□□□□ 0.02
CCDC40-209ENST00000573474 SLC26A2P50443 739 aa15.18■□□□□ 0.02
CCDC40-209ENST00000573474 NPEPPSP55786 919 aa15.18■□□□□ 0.02
CCDC40-209ENST00000573474 MYL5Q02045 173 aa15.18■□□□□ 0.02
CCDC40-209ENST00000573474 ARHGEF6Q15052 776 aa15.18■□□□□ 0.02
CCDC40-209ENST00000573474 FAM26FQ5R3K3 315 aa15.18■□□□□ 0.02
CCDC40-209ENST00000573474 GJC2Q5T442 439 aaPredicted RBP15.18■□□□□ 0.02
CCDC40-209ENST00000573474 PLA2G4FQ68DD2 849 aa15.18■□□□□ 0.02
CCDC40-209ENST00000573474 TRMT1LQ7Z2T5 733 aaKnown RBP15.18■□□□□ 0.02
CCDC40-209ENST00000573474 OR6J1Q8NGC5 347 aa15.18■□□□□ 0.02
CCDC40-209ENST00000573474 ENOX1Q8TC92 643 aaKnown RBP15.18■□□□□ 0.02
CCDC40-209ENST00000573474 CD99L2Q8TCZ2 262 aa15.18■□□□□ 0.02
CCDC40-209ENST00000573474 AFG1LQ8WV93 481 aa15.18■□□□□ 0.02
CCDC40-209ENST00000573474 GLG1Q92896 1179 aa15.18■□□□□ 0.02
CCDC40-209ENST00000573474 ERO1AQ96HE7 468 aa15.18■□□□□ 0.02
CCDC40-209ENST00000573474 DHTKD1Q96HY7 919 aaPredicted RBP15.18■□□□□ 0.02
CCDC40-209ENST00000573474 NIFKQ9BYG3 293 aaKnown RBP15.18■□□□□ 0.02
CCDC40-209ENST00000573474 ZHX3Q9H4I2 956 aa15.18■□□□□ 0.02
CCDC40-209ENST00000573474 SMARCAD1Q9H4L7 1026 aa15.18■□□□□ 0.02
CCDC40-209ENST00000573474 SLC39A2Q9NP94 309 aa15.18■□□□□ 0.02
CCDC40-209ENST00000573474 CYP26B1Q9NR63 512 aa15.18■□□□□ 0.02
CCDC40-209ENST00000573474 SRRDQ9UH36 339 aa15.18■□□□□ 0.02
CCDC40-209ENST00000573474 SEPT9Q9UHD8 586 aaPredicted RBP15.18■□□□□ 0.02
CCDC40-209ENST00000573474 FAM184BQ9ULE4 1060 aa15.18■□□□□ 0.02
CCDC40-209ENST00000573474 PSMA7O14818 248 aa15.17■□□□□ 0.02
CCDC40-209ENST00000573474 USO1O60763 962 aaKnown RBP15.17■□□□□ 0.02
CCDC40-209ENST00000573474 HIP1RO75146 1068 aa15.17■□□□□ 0.02
CCDC40-209ENST00000573474 HSPA6P17066 643 aa15.17■□□□□ 0.02
CCDC40-209ENST00000573474 ZNF131P52739 623 aa15.17■□□□□ 0.02
CCDC40-209ENST00000573474 TPM4P67936 248 aa15.17■□□□□ 0.02
CCDC40-209ENST00000573474 CAP1Q01518 475 aa15.17■□□□□ 0.02
CCDC40-209ENST00000573474 KLHL10Q6JEL2 608 aa15.17■□□□□ 0.02
CCDC40-209ENST00000573474 KIAA0895Q8NCT3 520 aa15.17■□□□□ 0.02
CCDC40-209ENST00000573474 NELFBQ8WX92 580 aa15.17■□□□□ 0.02
CCDC40-209ENST00000573474 HPS3Q969F9 1004 aa15.17■□□□□ 0.02
CCDC40-209ENST00000573474 PARVGQ9HBI0 331 aa15.17■□□□□ 0.02
CCDC40-209ENST00000573474 SEL1LQ9UBV2 794 aa15.17■□□□□ 0.02
CCDC40-209ENST00000573474 RWDD2AQ9UIY3 292 aa15.17■□□□□ 0.02
CCDC40-209ENST00000573474 GNEQ9Y223 722 aaKnown RBP15.17■□□□□ 0.02
CCDC40-209ENST00000573474 Q9Y3F1 56 aa15.17■□□□□ 0.02
CCDC40-209ENST00000573474 PPME1Q9Y570 386 aa15.17■□□□□ 0.02
CCDC40-209ENST00000573474 PCDHA2Q9Y5H9 948 aa15.17■□□□□ 0.02
CCDC40-209ENST00000573474 LOXHD1Q8IVV2 1947 aa15.17■□□□□ 0.02
CCDC40-209ENST00000573474 RSPH10B2B2RC85 870 aa15.16■□□□□ 0.02
CCDC40-209ENST00000573474 DYNC1LI2O43237 492 aaPredicted RBP15.16■□□□□ 0.02
CCDC40-209ENST00000573474 DGAT1O75907 488 aa15.16■□□□□ 0.02
CCDC40-209ENST00000573474 KIF20AO95235 890 aa15.16■□□□□ 0.02
CCDC40-209ENST00000573474 RSPH10BP0C881 870 aa15.16■□□□□ 0.02
CCDC40-209ENST00000573474 HOXD8P13378 290 aaPredicted RBP15.16■□□□□ 0.02
CCDC40-209ENST00000573474 PTGS1P23219 599 aa15.16■□□□□ 0.02
CCDC40-209ENST00000573474 MAP2K1Q02750 393 aaPredicted RBP15.16■□□□□ 0.02
CCDC40-209ENST00000573474 PAK1Q13153 545 aa15.16■□□□□ 0.02
CCDC40-209ENST00000573474 NCAPHQ15003 741 aa15.16■□□□□ 0.02
CCDC40-209ENST00000573474 SFR1Q86XK3 245 aa15.16■□□□□ 0.02
CCDC40-209ENST00000573474 GUF1Q8N442 669 aaKnown RBP15.16■□□□□ 0.02
CCDC40-209ENST00000573474 MYCT1Q8N699 235 aa15.16■□□□□ 0.02
CCDC40-209ENST00000573474 ATP8B4Q8TF62 1192 aa15.16■□□□□ 0.02
CCDC40-209ENST00000573474 BBXQ8WY36 941 aaPredicted RBP15.16■□□□□ 0.02
CCDC40-209ENST00000573474 TRIB2Q92519 343 aa15.16■□□□□ 0.02
CCDC40-209ENST00000573474 DRC1Q96MC2 740 aa15.16■□□□□ 0.02
CCDC40-209ENST00000573474 SH2D3AQ9BRG2 576 aa15.16■□□□□ 0.02
CCDC40-209ENST00000573474 CTNND2Q9UQB3 1225 aa15.16■□□□□ 0.02
CCDC40-209ENST00000573474 MAPK8IP1Q9UQF2 711 aa15.16■□□□□ 0.02
CCDC40-209ENST00000573474 SFI1A8K8P3 1242 aa15.15■□□□□ 0.02
CCDC40-209ENST00000573474 ADCY6O43306 1168 aa15.15■□□□□ 0.02
CCDC40-209ENST00000573474 LGALS2P05162 132 aa15.15■□□□□ 0.02
CCDC40-209ENST00000573474 MMP3P08254 477 aa15.15■□□□□ 0.02
CCDC40-209ENST00000573474 AKR1A1P14550 325 aa15.15■□□□□ 0.02
CCDC40-209ENST00000573474 MAPK7Q13164 816 aa15.15■□□□□ 0.02
CCDC40-209ENST00000573474 PLCB4Q15147 1175 aa15.15■□□□□ 0.02
CCDC40-209ENST00000573474 TARBP2Q15633 366 aaKnown RBP15.15■□□□□ 0.02
CCDC40-209ENST00000573474 DGKDQ16760 1214 aa15.15■□□□□ 0.02
CCDC40-209ENST00000573474 MTERF2Q49AM1 385 aa15.15■□□□□ 0.02
CCDC40-209ENST00000573474 SPATA1Q5VX52 437 aa15.15■□□□□ 0.02
CCDC40-209ENST00000573474 MYOCDQ8IZQ8 938 aa15.15■□□□□ 0.02
CCDC40-209ENST00000573474 MCPH1Q8NEM0 835 aa15.15■□□□□ 0.02
CCDC40-209ENST00000573474 ANP32BQ92688 251 aaKnown RBP15.15■□□□□ 0.02
CCDC40-209ENST00000573474 MED15Q96RN5 788 aa15.15■□□□□ 0.02
CCDC40-209ENST00000573474 BEGAINQ9BUH8 593 aa15.15■□□□□ 0.02
CCDC40-209ENST00000573474 AP5M1Q9H0R1 490 aa15.15■□□□□ 0.02
CCDC40-209ENST00000573474 POLD4Q9HCU8 107 aa15.15■□□□□ 0.02
CCDC40-209ENST00000573474 PDLIM7Q9NR12 457 aa15.15■□□□□ 0.02
CCDC40-209ENST00000573474 OLFML3Q9NRN5 406 aa15.15■□□□□ 0.02
CCDC40-209ENST00000573474 ERAP1Q9NZ08 941 aa15.15■□□□□ 0.02
CCDC40-209ENST00000573474 TBC1D7Q9P0N9 293 aa15.15■□□□□ 0.02
CCDC40-209ENST00000573474 BICDL2A1A5D9 508 aa15.14■□□□□ 0.01
CCDC40-209ENST00000573474 A6NJR5 290 aa15.14■□□□□ 0.01
CCDC40-209ENST00000573474 HBP1O60381 514 aa15.14■□□□□ 0.01
CCDC40-209ENST00000573474 CYBAP13498 195 aa15.14■□□□□ 0.01
CCDC40-209ENST00000573474 CCNE1P24864 410 aa15.14■□□□□ 0.01
CCDC40-209ENST00000573474 RFC5P40937 340 aa15.14■□□□□ 0.01
CCDC40-209ENST00000573474 PRMT2P55345 433 aa15.14■□□□□ 0.01
CCDC40-209ENST00000573474 STX17P56962 302 aa15.14■□□□□ 0.01
CCDC40-209ENST00000573474 LRRC41Q15345 812 aa15.14■□□□□ 0.01
Retrieved 100 of 20,778 RNA–protein pairs in 35.6 ms