RNA–Protein interactions for RNA: ENST00000571409.1

CTDNEP1-206, Transcript of CTD nuclear envelope phosphatase 1, humanhuman

TSL 5

Gene CTDNEP1, Length 741 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDNEP1-206ENST00000571409 THEGQ9P2T0 379 aa34.27■■■■□ 3.08
CTDNEP1-206ENST00000571409 KDM3AQ9Y4C1 1321 aa34.27■■■■□ 3.08
CTDNEP1-206ENST00000571409 CCDC194A0A1B0GVG4 234 aa34.26■■■■□ 3.08
CTDNEP1-206ENST00000571409 ENPP3O14638 875 aa34.26■■■■□ 3.08
CTDNEP1-206ENST00000571409 PSMD10O75832 226 aa34.26■■■■□ 3.08
CTDNEP1-206ENST00000571409 SFNP31947 248 aa34.26■■■■□ 3.08
CTDNEP1-206ENST00000571409 JAK3P52333 1124 aa34.26■■■■□ 3.08
CTDNEP1-206ENST00000571409 KIAA0319LQ8IZA0 1049 aa34.26■■■■□ 3.08
CTDNEP1-206ENST00000571409 WASF1Q92558 559 aa34.26■■■■□ 3.08
CTDNEP1-206ENST00000571409 GTF3C6Q969F1 213 aa34.26■■■■□ 3.08
CTDNEP1-206ENST00000571409 FAM167AQ96KS9 214 aa34.26■■■■□ 3.08
CTDNEP1-206ENST00000571409 C17orf80Q9BSJ5 609 aa34.26■■■■□ 3.08
CTDNEP1-206ENST00000571409 SUGCTQ9HAC7 445 aa34.26■■■■□ 3.08
CTDNEP1-206ENST00000571409 C22orf31O95567 290 aa34.25■■■■□ 3.07
CTDNEP1-206ENST00000571409 PADI3Q9ULW8 664 aa34.25■■■■□ 3.07
CTDNEP1-206ENST00000571409 CEP131Q9UPN4 1083 aa34.25■■■■□ 3.07
CTDNEP1-206ENST00000571409 COL4A6Q14031 1691 aa34.25■■■■□ 3.07
CTDNEP1-206ENST00000571409 EVPLQ92817 2033 aa34.25■■■■□ 3.07
CTDNEP1-206ENST00000571409 ZNF862O60290 1169 aa34.24■■■■□ 3.07
CTDNEP1-206ENST00000571409 PAK2Q13177 524 aa34.24■■■■□ 3.07
CTDNEP1-206ENST00000571409 LETM2Q2VYF4 491 aa34.24■■■■□ 3.07
CTDNEP1-206ENST00000571409 TSPYL2Q9H2G4 693 aaPredicted RBP34.24■■■■□ 3.07
CTDNEP1-206ENST00000571409 DDX25Q9UHL0 483 aaKnown RBP34.24■■■■□ 3.07
CTDNEP1-206ENST00000571409 GINS2Q9Y248 185 aa34.24■■■■□ 3.07
CTDNEP1-206ENST00000571409 FDPSP14324 419 aaKnown RBP34.23■■■■□ 3.07
CTDNEP1-206ENST00000571409 UGCGQ16739 394 aa34.23■■■■□ 3.07
CTDNEP1-206ENST00000571409 MIER3Q7Z3K6 550 aa34.23■■■■□ 3.07
CTDNEP1-206ENST00000571409 ETNPPLQ8TBG4 499 aa34.23■■■■□ 3.07
CTDNEP1-206ENST00000571409 OXER1Q8TDS5 423 aa34.23■■■■□ 3.07
CTDNEP1-206ENST00000571409 LINC01599Q8WXQ3 324 aa34.23■■■■□ 3.07
CTDNEP1-206ENST00000571409 FTHL17Q9BXU8 183 aa34.23■■■■□ 3.07
CTDNEP1-206ENST00000571409 OATP04181 439 aa34.22■■■■□ 3.07
CTDNEP1-206ENST00000571409 PRKCEQ02156 737 aa34.22■■■■□ 3.07
CTDNEP1-206ENST00000571409 NEK8Q86SG6 692 aa34.22■■■■□ 3.07
CTDNEP1-206ENST00000571409 METTL13Q8N6R0 699 aa34.22■■■■□ 3.07
CTDNEP1-206ENST00000571409 FBXO22Q8NEZ5 403 aa34.22■■■■□ 3.07
CTDNEP1-206ENST00000571409 ATXN2LQ8WWM7 1075 aaKnown RBP34.22■■■■□ 3.07
CTDNEP1-206ENST00000571409 CDHR5Q9HBB8 845 aa34.22■■■■□ 3.07
CTDNEP1-206ENST00000571409 PRRC2BQ5JSZ5 2229 aaKnown RBP34.22■■■■□ 3.07
CTDNEP1-206ENST00000571409 SLC37A4O43826 429 aa34.21■■■■□ 3.07
CTDNEP1-206ENST00000571409 SKIV2LQ15477 1246 aaKnown RBP34.21■■■■□ 3.07
CTDNEP1-206ENST00000571409 RDM1Q8NG50 284 aa34.21■■■■□ 3.07
CTDNEP1-206ENST00000571409 NRBP2Q9NSY0 501 aa34.21■■■■□ 3.07
CTDNEP1-206ENST00000571409 TMEM266Q2M3C6 531 aa34.2■■■■□ 3.07
CTDNEP1-206ENST00000571409 TJAP1Q5JTD0 557 aa34.2■■■■□ 3.07
CTDNEP1-206ENST00000571409 B3GNT9Q6UX72 402 aa34.2■■■■□ 3.07
CTDNEP1-206ENST00000571409 PIK3AP1Q6ZUJ8 805 aa34.2■■■■□ 3.07
CTDNEP1-206ENST00000571409 RTN4RL1Q86UN2 441 aaPredicted RBP34.2■■■■□ 3.07
CTDNEP1-206ENST00000571409 NSUN7Q8NE18 718 aaKnown RBP34.2■■■■□ 3.07
CTDNEP1-206ENST00000571409 SAMD11Q96NU1 681 aa34.2■■■■□ 3.07
CTDNEP1-206ENST00000571409 PPP1R16BQ96T49 567 aa34.2■■■■□ 3.07
CTDNEP1-206ENST00000571409 LMCD1Q9NZU5 365 aa34.2■■■■□ 3.07
CTDNEP1-206ENST00000571409 REV3LO60673 3130 aa34.19■■■■□ 3.06
CTDNEP1-206ENST00000571409 NLRC5Q86WI3 1866 aa34.19■■■■□ 3.06
CTDNEP1-206ENST00000571409 MAGEB2O15479 319 aa34.19■■■■□ 3.06
CTDNEP1-206ENST00000571409 EPC2Q52LR7 807 aa34.19■■■■□ 3.06
CTDNEP1-206ENST00000571409 TTC3P53804 2025 aa34.18■■■■□ 3.06
CTDNEP1-206ENST00000571409 VTNP04004 478 aa34.18■■■■□ 3.06
CTDNEP1-206ENST00000571409 CLCN3P51790 818 aa34.18■■■■□ 3.06
CTDNEP1-206ENST00000571409 NFX1Q12986 1120 aaKnown RBP34.18■■■■□ 3.06
CTDNEP1-206ENST00000571409 KIZQ2M2Z5 673 aa34.18■■■■□ 3.06
CTDNEP1-206ENST00000571409 TMEM40Q8WWA1 233 aa34.18■■■■□ 3.06
CTDNEP1-206ENST00000571409 SYMPKQ92797 1274 aaKnown RBP34.18■■■■□ 3.06
CTDNEP1-206ENST00000571409 NOC2LQ9Y3T9 749 aaKnown RBP34.18■■■■□ 3.06
CTDNEP1-206ENST00000571409 CCNT1O60563 726 aaKnown RBP34.17■■■■□ 3.06
CTDNEP1-206ENST00000571409 RPS6KA5O75582 802 aa34.17■■■■□ 3.06
CTDNEP1-206ENST00000571409 GCFC2P16383 781 aaKnown RBP34.17■■■■□ 3.06
CTDNEP1-206ENST00000571409 KRT2P35908 639 aa34.17■■■■□ 3.06
CTDNEP1-206ENST00000571409 PPP4R3AQ6IN85 833 aa34.17■■■■□ 3.06
CTDNEP1-206ENST00000571409 EFCAB12Q6NXP0 572 aa34.17■■■■□ 3.06
CTDNEP1-206ENST00000571409 ADGRA3Q8IWK6 1321 aa34.17■■■■□ 3.06
CTDNEP1-206ENST00000571409 FIBCD1Q8N539 461 aa34.17■■■■□ 3.06
CTDNEP1-206ENST00000571409 TMX1Q9H3N1 280 aa34.17■■■■□ 3.06
CTDNEP1-206ENST00000571409 BRMS1Q9HCU9 246 aa34.17■■■■□ 3.06
CTDNEP1-206ENST00000571409 RALGAPA2Q2PPJ7 1873 aa34.16■■■■□ 3.06
CTDNEP1-206ENST00000571409 JAK2O60674 1132 aa34.16■■■■□ 3.06
CTDNEP1-206ENST00000571409 MRPS5P82675 430 aaKnown RBP34.16■■■■□ 3.06
CTDNEP1-206ENST00000571409 NR5A1Q13285 461 aa34.16■■■■□ 3.06
CTDNEP1-206ENST00000571409 EARS2Q5JPH6 523 aaKnown RBP34.16■■■■□ 3.06
CTDNEP1-206ENST00000571409 TMEM192Q8IY95 271 aa34.16■■■■□ 3.06
CTDNEP1-206ENST00000571409 ASB2Q96Q27 587 aa34.16■■■■□ 3.06
CTDNEP1-206ENST00000571409 OSMRQ99650 979 aa34.16■■■■□ 3.06
CTDNEP1-206ENST00000571409 RC3H2Q9HBD1 1191 aaKnown RBP34.16■■■■□ 3.06
CTDNEP1-206ENST00000571409 ERVK-5Q9HDB9 667 aa34.16■■■■□ 3.06
CTDNEP1-206ENST00000571409 TMOD1P28289 359 aa34.15■■■■□ 3.06
CTDNEP1-206ENST00000571409 CRYBB1P53674 252 aaPredicted RBP34.15■■■■□ 3.06
CTDNEP1-206ENST00000571409 LRRC71Q8N4P6 559 aa34.15■■■■□ 3.06
CTDNEP1-206ENST00000571409 LINC01465Q8N7H1 131 aa34.15■■■■□ 3.06
CTDNEP1-206ENST00000571409 ZNF689Q96CS4 500 aaPredicted RBP34.15■■■■□ 3.06
CTDNEP1-206ENST00000571409 MAP7D2Q96T17 732 aa34.15■■■■□ 3.06
CTDNEP1-206ENST00000571409 NAP1L4Q99733 375 aaKnown RBP34.15■■■■□ 3.06
CTDNEP1-206ENST00000571409 KCNMB3Q9NPA1 279 aa34.15■■■■□ 3.06
CTDNEP1-206ENST00000571409 AKT3Q9Y243 479 aa34.15■■■■□ 3.06
CTDNEP1-206ENST00000571409 FAM205CA6NFA0 338 aa34.14■■■■□ 3.06
CTDNEP1-206ENST00000571409 GPR32O75388 356 aa34.14■■■■□ 3.06
CTDNEP1-206ENST00000571409 ST3GAL1Q11201 340 aa34.14■■■■□ 3.06
CTDNEP1-206ENST00000571409 C8orf34Q49A92 452 aa34.14■■■■□ 3.06
CTDNEP1-206ENST00000571409 ODR4Q5SWX8 454 aa34.14■■■■□ 3.06
CTDNEP1-206ENST00000571409 NPAS4Q8IUM7 802 aa34.14■■■■□ 3.06
CTDNEP1-206ENST00000571409 FAM20AQ96MK3 541 aa34.14■■■■□ 3.06
Retrieved 100 of 20,778 RNA–protein pairs in 60 ms