RNA–Protein interactions for RNA: ENST00000571277.1

LITAF-206, Transcript of lipopolysaccharide induced TNF factor, humanhuman

TSL 4

Gene LITAF, Length 587 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LITAF-206ENST00000571277 ZNF484Q5JVG2 852 aa12.87□□□□□ -0.35
LITAF-206ENST00000571277 SMAP1Q8IYB5 467 aaPredicted RBP12.87□□□□□ -0.35
LITAF-206ENST00000571277 BANK1Q8NDB2 785 aa12.87□□□□□ -0.35
LITAF-206ENST00000571277 CCDC148Q8NFR7 591 aa12.87□□□□□ -0.35
LITAF-206ENST00000571277 BBXQ8WY36 941 aaPredicted RBP12.87□□□□□ -0.35
LITAF-206ENST00000571277 ZNF274Q96GC6 653 aaPredicted RBP12.87□□□□□ -0.35
LITAF-206ENST00000571277 UPF3BQ9BZI7 483 aaKnown RBP12.87□□□□□ -0.35
LITAF-206ENST00000571277 ERVK-5Q9HDB9 667 aa12.87□□□□□ -0.35
LITAF-206ENST00000571277 PCDHA10Q9Y5I2 948 aa12.87□□□□□ -0.35
LITAF-206ENST00000571277 M0R2N6 131 aa12.86□□□□□ -0.35
LITAF-206ENST00000571277 GRM6O15303 877 aa12.86□□□□□ -0.35
LITAF-206ENST00000571277 MSH4O15457 936 aa12.86□□□□□ -0.35
LITAF-206ENST00000571277 ZNF862O60290 1169 aa12.86□□□□□ -0.35
LITAF-206ENST00000571277 MGEA5O60502 916 aa12.86□□□□□ -0.35
LITAF-206ENST00000571277 KCNA5P22460 613 aa12.86□□□□□ -0.35
LITAF-206ENST00000571277 CTNNB1P35222 781 aa12.86□□□□□ -0.35
LITAF-206ENST00000571277 USP11P51784 963 aa12.86□□□□□ -0.35
LITAF-206ENST00000571277 PAK2Q13177 524 aa12.86□□□□□ -0.35
LITAF-206ENST00000571277 CAMK1Q14012 370 aa12.86□□□□□ -0.35
LITAF-206ENST00000571277 BTG3Q14201 252 aaPredicted RBP12.86□□□□□ -0.35
LITAF-206ENST00000571277 TMEM266Q2M3C6 531 aa12.86□□□□□ -0.35
LITAF-206ENST00000571277 LEXMQ3ZCV2 418 aa12.86□□□□□ -0.35
LITAF-206ENST00000571277 TCEAL5Q5H9L2 206 aa12.86□□□□□ -0.35
LITAF-206ENST00000571277 NPAS4Q8IUM7 802 aa12.86□□□□□ -0.35
LITAF-206ENST00000571277 GADD45GIP1Q8TAE8 222 aaPredicted RBP12.86□□□□□ -0.35
LITAF-206ENST00000571277 NEK9Q8TD19 979 aa12.86□□□□□ -0.35
LITAF-206ENST00000571277 LARP6Q9BRS8 491 aaKnown RBP12.86□□□□□ -0.35
LITAF-206ENST00000571277 CD320Q9NPF0 282 aa12.86□□□□□ -0.35
LITAF-206ENST00000571277 NOC2LQ9Y3T9 749 aaKnown RBP12.86□□□□□ -0.35
LITAF-206ENST00000571277 RWDD3Q9Y3V2 267 aa12.86□□□□□ -0.35
LITAF-206ENST00000571277 CYP46A1Q9Y6A2 500 aa12.86□□□□□ -0.35
LITAF-206ENST00000571277 MRPL42Q9Y6G3 142 aaKnown RBP12.86□□□□□ -0.35
LITAF-206ENST00000571277 FNDC1Q4ZHG4 1894 aaPredicted RBP12.85□□□□□ -0.35
LITAF-206ENST00000571277 GPR32O75388 356 aa12.85□□□□□ -0.35
LITAF-206ENST00000571277 PSAPP07602 524 aa12.85□□□□□ -0.35
LITAF-206ENST00000571277 KIZQ2M2Z5 673 aa12.85□□□□□ -0.35
LITAF-206ENST00000571277 CKAP2LQ8IYA6 745 aa12.85□□□□□ -0.35
LITAF-206ENST00000571277 CMTR2Q8IYT2 770 aaKnown RBP12.85□□□□□ -0.35
LITAF-206ENST00000571277 LINC01465Q8N7H1 131 aa12.85□□□□□ -0.35
LITAF-206ENST00000571277 TBCKQ8TEA7 893 aa12.85□□□□□ -0.35
LITAF-206ENST00000571277 SLC5A5Q92911 643 aa12.85□□□□□ -0.35
LITAF-206ENST00000571277 KHSRPQ92945 711 aaKnown RBP eCLIP12.85□□□□□ -0.35
LITAF-206ENST00000571277 AIFM3Q96NN9 605 aa12.85□□□□□ -0.35
LITAF-206ENST00000571277 RIT2Q99578 217 aa12.85□□□□□ -0.35
LITAF-206ENST00000571277 C11orf84Q9BUA3 381 aaPredicted RBP12.85□□□□□ -0.35
LITAF-206ENST00000571277 NSUN3Q9H649 340 aaKnown RBP12.85□□□□□ -0.35
LITAF-206ENST00000571277 GABBR1Q9UBS5 961 aa12.85□□□□□ -0.35
LITAF-206ENST00000571277 GINS2Q9Y248 185 aa12.85□□□□□ -0.35
LITAF-206ENST00000571277 WDR64B1ANS9 1081 aa12.84□□□□□ -0.35
LITAF-206ENST00000571277 RPS6KA5O75582 802 aa12.84□□□□□ -0.35
LITAF-206ENST00000571277 PSMD10O75832 226 aa12.84□□□□□ -0.35
LITAF-206ENST00000571277 LTBRP36941 435 aa12.84□□□□□ -0.35
LITAF-206ENST00000571277 GATMP50440 423 aa12.84□□□□□ -0.35
LITAF-206ENST00000571277 NLRP5P59047 1200 aa12.84□□□□□ -0.35
LITAF-206ENST00000571277 SSRP1Q08945 709 aaKnown RBP12.84□□□□□ -0.35
LITAF-206ENST00000571277 UGCGQ16739 394 aa12.84□□□□□ -0.35
LITAF-206ENST00000571277 CTC1Q2NKJ3 1217 aa12.84□□□□□ -0.35
LITAF-206ENST00000571277 B3GNT9Q6UX72 402 aa12.84□□□□□ -0.35
LITAF-206ENST00000571277 FAM43BQ6ZT52 329 aaPredicted RBP12.84□□□□□ -0.35
LITAF-206ENST00000571277 TRIM22Q8IYM9 498 aa12.84□□□□□ -0.35
LITAF-206ENST00000571277 DAGLBQ8NCG7 672 aa12.84□□□□□ -0.35
LITAF-206ENST00000571277 P2RX5Q93086 422 aa12.84□□□□□ -0.35
LITAF-206ENST00000571277 GJA10Q969M2 543 aa12.84□□□□□ -0.35
LITAF-206ENST00000571277 PABPC5Q96DU9 382 aaKnown RBP12.84□□□□□ -0.35
LITAF-206ENST00000571277 PLVAPQ9BX97 442 aa12.84□□□□□ -0.35
LITAF-206ENST00000571277 LMAN2LQ9H0V9 348 aa12.84□□□□□ -0.35
LITAF-206ENST00000571277 DISC1Q9NRI5 854 aa12.84□□□□□ -0.35
LITAF-206ENST00000571277 PCDHA4Q9UN74 947 aa12.84□□□□□ -0.35
LITAF-206ENST00000571277 ST3GAL5Q9UNP4 418 aa12.84□□□□□ -0.35
LITAF-206ENST00000571277 PLAGL2Q9UPG8 496 aa12.84□□□□□ -0.35
LITAF-206ENST00000571277 PLXNA4Q9HCM2 1894 aa12.83□□□□□ -0.36
LITAF-206ENST00000571277 CYP3A7-CYP3A51PA0A087WV96 503 aa12.83□□□□□ -0.36
LITAF-206ENST00000571277 GRXCR2A6NFK2 248 aa12.83□□□□□ -0.36
LITAF-206ENST00000571277 C9IYK1 514 aa12.83□□□□□ -0.36
LITAF-206ENST00000571277 H3BQ06 376 aaPredicted RBP12.83□□□□□ -0.36
LITAF-206ENST00000571277 DEXIO95424 95 aa12.83□□□□□ -0.36
LITAF-206ENST00000571277 TDP2O95551 362 aa12.83□□□□□ -0.36
LITAF-206ENST00000571277 MMP1P03956 469 aa12.83□□□□□ -0.36
LITAF-206ENST00000571277 VTNP04004 478 aa12.83□□□□□ -0.36
LITAF-206ENST00000571277 STAG3L1P0CL83 205 aa12.83□□□□□ -0.36
LITAF-206ENST00000571277 CYP3A7P24462 503 aa12.83□□□□□ -0.36
LITAF-206ENST00000571277 DNAJB1P25685 340 aa12.83□□□□□ -0.36
LITAF-206ENST00000571277 SARSP49591 514 aaKnown RBP12.83□□□□□ -0.36
LITAF-206ENST00000571277 CLCN3P51790 818 aa12.83□□□□□ -0.36
LITAF-206ENST00000571277 CRYBB1P53674 252 aaPredicted RBP12.83□□□□□ -0.36
LITAF-206ENST00000571277 HYAL1Q12794 435 aa12.83□□□□□ -0.36
LITAF-206ENST00000571277 NFX1Q12986 1120 aaKnown RBP12.83□□□□□ -0.36
LITAF-206ENST00000571277 Q4G0T1 1027 aa12.83□□□□□ -0.36
LITAF-206ENST00000571277 TRMT1LQ7Z2T5 733 aaKnown RBP12.83□□□□□ -0.36
LITAF-206ENST00000571277 FAM228AQ86W67 206 aa12.83□□□□□ -0.36
LITAF-206ENST00000571277 FAM178BQ8IXR5 827 aa12.83□□□□□ -0.36
LITAF-206ENST00000571277 BLIDQ8IZY5 108 aa12.83□□□□□ -0.36
LITAF-206ENST00000571277 METTL13Q8N6R0 699 aa12.83□□□□□ -0.36
LITAF-206ENST00000571277 MBOAT7Q96N66 472 aa12.83□□□□□ -0.36
LITAF-206ENST00000571277 PPP1R16BQ96T49 567 aa12.83□□□□□ -0.36
LITAF-206ENST00000571277 OSMRQ99650 979 aa12.83□□□□□ -0.36
LITAF-206ENST00000571277 ADAM2Q99965 735 aa12.83□□□□□ -0.36
LITAF-206ENST00000571277 ADAMTS10Q9H324 1103 aa12.83□□□□□ -0.36
LITAF-206ENST00000571277 UNC45AQ9H3U1 944 aa12.83□□□□□ -0.36
LITAF-206ENST00000571277 ALG13Q9NP73 1137 aaKnown RBP12.83□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 26.5 ms