RNA–Protein interactions for RNA: ENST00000570828.5

CTDNEP1-205, Transcript of CTD nuclear envelope phosphatase 1, humanhuman

TSL 3

Gene CTDNEP1, Length 986 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDNEP1-205ENST00000570828 OSBPL7Q9BZF2 842 aa14.03□□□□□ -0.16
CTDNEP1-205ENST00000570828 SH3GLB2Q9NR46 395 aa14.03□□□□□ -0.16
CTDNEP1-205ENST00000570828 TBC1D22BQ9NU19 505 aa14.03□□□□□ -0.16
CTDNEP1-205ENST00000570828 PDRG1Q9NUG6 133 aa14.03□□□□□ -0.16
CTDNEP1-205ENST00000570828 CDY2AQ9Y6F7 541 aa14.03□□□□□ -0.16
CTDNEP1-205ENST00000570828 SPTBN5Q9NRC6 3674 aaKnown RBP14.03□□□□□ -0.16
CTDNEP1-205ENST00000570828 UPP2O95045 317 aa14.02□□□□□ -0.17
CTDNEP1-205ENST00000570828 DEXIO95424 95 aa14.02□□□□□ -0.17
CTDNEP1-205ENST00000570828 MRPS6P82932 125 aaKnown RBP14.02□□□□□ -0.17
CTDNEP1-205ENST00000570828 HTRA4P83105 476 aaPredicted RBP14.02□□□□□ -0.17
CTDNEP1-205ENST00000570828 STK3Q13188 491 aa14.02□□□□□ -0.17
CTDNEP1-205ENST00000570828 GRB10Q13322 594 aa14.02□□□□□ -0.17
CTDNEP1-205ENST00000570828 LPIN1Q14693 890 aa14.02□□□□□ -0.17
CTDNEP1-205ENST00000570828 IER5Q5VY09 327 aa14.02□□□□□ -0.17
CTDNEP1-205ENST00000570828 ZNF746Q6NUN9 644 aaPredicted RBP14.02□□□□□ -0.17
CTDNEP1-205ENST00000570828 PDXDC2PQ6P474 469 aa14.02□□□□□ -0.17
CTDNEP1-205ENST00000570828 ABHD15Q6UXT9 468 aa14.02□□□□□ -0.17
CTDNEP1-205ENST00000570828 CCDC60Q8IWA6 550 aaPredicted RBP14.02□□□□□ -0.17
CTDNEP1-205ENST00000570828 IL27Q8NEV9 243 aa14.02□□□□□ -0.17
CTDNEP1-205ENST00000570828 ATP8B4Q8TF62 1192 aa14.02□□□□□ -0.17
CTDNEP1-205ENST00000570828 TRAPPC12Q8WVT3 735 aa14.02□□□□□ -0.17
CTDNEP1-205ENST00000570828 ZBTB10Q96DT7 871 aa14.02□□□□□ -0.17
CTDNEP1-205ENST00000570828 UIMC1Q96RL1 719 aa14.02□□□□□ -0.17
CTDNEP1-205ENST00000570828 LARP6Q9BRS8 491 aaKnown RBP14.02□□□□□ -0.17
CTDNEP1-205ENST00000570828 ZNF302Q9NR11 478 aa14.02□□□□□ -0.17
CTDNEP1-205ENST00000570828 MYO9BQ13459 2157 aa14.02□□□□□ -0.17
CTDNEP1-205ENST00000570828 IGKV6D-21A0A0A0MT36 114 aa14.01□□□□□ -0.17
CTDNEP1-205ENST00000570828 LOC101059915A0A1B0GWI6 518 aaPredicted RBP14.01□□□□□ -0.17
CTDNEP1-205ENST00000570828 DHX15O43143 795 aaKnown RBP14.01□□□□□ -0.17
CTDNEP1-205ENST00000570828 HBP1O60381 514 aa14.01□□□□□ -0.17
CTDNEP1-205ENST00000570828 CDKL5O76039 1030 aa14.01□□□□□ -0.17
CTDNEP1-205ENST00000570828 CIITAP33076 1130 aa14.01□□□□□ -0.17
CTDNEP1-205ENST00000570828 ERVK-21P61565 698 aa14.01□□□□□ -0.17
CTDNEP1-205ENST00000570828 MRPS5P82675 430 aaKnown RBP14.01□□□□□ -0.17
CTDNEP1-205ENST00000570828 KRT76Q01546 638 aa14.01□□□□□ -0.17
CTDNEP1-205ENST00000570828 FBXO47Q5MNV8 452 aa14.01□□□□□ -0.17
CTDNEP1-205ENST00000570828 KRT40Q6A162 431 aa14.01□□□□□ -0.17
CTDNEP1-205ENST00000570828 TSHZ1Q6ZSZ6 1077 aa14.01□□□□□ -0.17
CTDNEP1-205ENST00000570828 CKAP2LQ8IYA6 745 aa14.01□□□□□ -0.17
CTDNEP1-205ENST00000570828 SMAP1Q8IYB5 467 aaPredicted RBP14.01□□□□□ -0.17
CTDNEP1-205ENST00000570828 TOP1MTQ969P6 601 aa14.01□□□□□ -0.17
CTDNEP1-205ENST00000570828 C22orf23Q9BZE7 217 aa14.01□□□□□ -0.17
CTDNEP1-205ENST00000570828 TSHZ2Q9NRE2 1034 aa14.01□□□□□ -0.17
CTDNEP1-205ENST00000570828 PCDHA2Q9Y5H9 948 aa14.01□□□□□ -0.17
CTDNEP1-205ENST00000570828 TRPV2Q9Y5S1 764 aa14.01□□□□□ -0.17
CTDNEP1-205ENST00000570828 XIRP2A4UGR9 3374 aa14□□□□□ -0.17
CTDNEP1-205ENST00000570828 COL1A2P08123 1366 aa14□□□□□ -0.17
CTDNEP1-205ENST00000570828 SMIM35A0A1B0GVV1 85 aa14□□□□□ -0.17
CTDNEP1-205ENST00000570828 TMEM62Q0P6H9 643 aa14□□□□□ -0.17
CTDNEP1-205ENST00000570828 SWSAP1Q6NVH7 229 aa14□□□□□ -0.17
CTDNEP1-205ENST00000570828 MTHFD1LQ6UB35 978 aa14□□□□□ -0.17
CTDNEP1-205ENST00000570828 ASB2Q96Q27 587 aa14□□□□□ -0.17
CTDNEP1-205ENST00000570828 PCDHA4Q9UN74 947 aa14□□□□□ -0.17
CTDNEP1-205ENST00000570828 SAMM50Q9Y512 469 aa14□□□□□ -0.17
CTDNEP1-205ENST00000570828 LPXNO60711 386 aa13.99□□□□□ -0.17
CTDNEP1-205ENST00000570828 GAS7O60861 476 aa13.99□□□□□ -0.17
CTDNEP1-205ENST00000570828 PSAPP07602 524 aa13.99□□□□□ -0.17
CTDNEP1-205ENST00000570828 CD52P31358 61 aa13.99□□□□□ -0.17
CTDNEP1-205ENST00000570828 USP11P51784 963 aa13.99□□□□□ -0.17
CTDNEP1-205ENST00000570828 ANAPC15P60006 121 aa13.99□□□□□ -0.17
CTDNEP1-205ENST00000570828 PAK2Q13177 524 aa13.99□□□□□ -0.17
CTDNEP1-205ENST00000570828 ZNF484Q5JVG2 852 aa13.99□□□□□ -0.17
CTDNEP1-205ENST00000570828 GALNT17Q6IS24 598 aa13.99□□□□□ -0.17
CTDNEP1-205ENST00000570828 FAM177A1Q8N128 213 aaPredicted RBP13.99□□□□□ -0.17
CTDNEP1-205ENST00000570828 NME8Q8N427 588 aa13.99□□□□□ -0.17
CTDNEP1-205ENST00000570828 LENG9Q96B70 501 aa13.99□□□□□ -0.17
CTDNEP1-205ENST00000570828 SAMD11Q96NU1 681 aa13.99□□□□□ -0.17
CTDNEP1-205ENST00000570828 C17orf80Q9BSJ5 609 aa13.99□□□□□ -0.17
CTDNEP1-205ENST00000570828 SLKQ9H2G2 1235 aaPredicted RBP13.99□□□□□ -0.17
CTDNEP1-205ENST00000570828 SUGCTQ9HAC7 445 aa13.99□□□□□ -0.17
CTDNEP1-205ENST00000570828 LMCD1Q9NZU5 365 aa13.99□□□□□ -0.17
CTDNEP1-205ENST00000570828 PCDHA10Q9Y5I2 948 aa13.99□□□□□ -0.17
CTDNEP1-205ENST00000570828 SQORQ9Y6N5 450 aa13.99□□□□□ -0.17
CTDNEP1-205ENST00000570828 REV3LO60673 3130 aa13.98□□□□□ -0.17
CTDNEP1-205ENST00000570828 PTPRSQ13332 1948 aa13.98□□□□□ -0.17
CTDNEP1-205ENST00000570828 IGSF9BQ9UPX0 1349 aa13.98□□□□□ -0.17
CTDNEP1-205ENST00000570828 WDR64B1ANS9 1081 aa13.98□□□□□ -0.17
CTDNEP1-205ENST00000570828 HRO43593 1189 aa13.98□□□□□ -0.17
CTDNEP1-205ENST00000570828 EIF5BO60841 1220 aaKnown RBP13.98□□□□□ -0.17
CTDNEP1-205ENST00000570828 CENPBP07199 599 aaPredicted RBP13.98□□□□□ -0.17
CTDNEP1-205ENST00000570828 KLRC1P26715 233 aa13.98□□□□□ -0.17
CTDNEP1-205ENST00000570828 AAK1Q2M2I8 961 aa13.98□□□□□ -0.17
CTDNEP1-205ENST00000570828 LRCH2Q5VUJ6 765 aa13.98□□□□□ -0.17
CTDNEP1-205ENST00000570828 BLIDQ8IZY5 108 aa13.98□□□□□ -0.17
CTDNEP1-205ENST00000570828 DAGLBQ8NCG7 672 aa13.98□□□□□ -0.17
CTDNEP1-205ENST00000570828 TBCKQ8TEA7 893 aa13.98□□□□□ -0.17
CTDNEP1-205ENST00000570828 IL17RAQ96F46 866 aa13.98□□□□□ -0.17
CTDNEP1-205ENST00000570828 FAM167AQ96KS9 214 aa13.98□□□□□ -0.17
CTDNEP1-205ENST00000570828 FTHL17Q9BXU8 183 aa13.98□□□□□ -0.17
CTDNEP1-205ENST00000570828 CELF4Q9BZC1 486 aaKnown RBP13.98□□□□□ -0.17
CTDNEP1-205ENST00000570828 AGO3Q9H9G7 860 aaKnown RBP13.98□□□□□ -0.17
CTDNEP1-205ENST00000570828 GABBR1Q9UBS5 961 aa13.98□□□□□ -0.17
CTDNEP1-205ENST00000570828 CEP131Q9UPN4 1083 aa13.98□□□□□ -0.17
CTDNEP1-205ENST00000570828 GINS2Q9Y248 185 aa13.98□□□□□ -0.17
CTDNEP1-205ENST00000570828 MAFBQ9Y5Q3 323 aaPredicted RBP13.98□□□□□ -0.17
CTDNEP1-205ENST00000570828 COL4A6Q14031 1691 aa13.98□□□□□ -0.17
CTDNEP1-205ENST00000570828 KDM3AQ9Y4C1 1321 aa13.97□□□□□ -0.17
CTDNEP1-205ENST00000570828 MICAL3Q7RTP6 2002 aa13.97□□□□□ -0.17
CTDNEP1-205ENST00000570828 PRRC2BQ5JSZ5 2229 aaKnown RBP13.97□□□□□ -0.17
CTDNEP1-205ENST00000570828 MSH4O15457 936 aa13.97□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 15.5 ms