RNA–Protein interactions for RNA: ENST00000569827.5

CAPN3-220, Transcript of calpain 3, humanhuman

TSL 5

Gene CAPN3, Length 908 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN3-220ENST00000569827 PBX3P40426 434 aa13.77□□□□□ -0.21
CAPN3-220ENST00000569827 C2orf16Q68DN1 1984 aa13.77□□□□□ -0.21
CAPN3-220ENST00000569827 MICAL1Q8TDZ2 1067 aa13.77□□□□□ -0.21
CAPN3-220ENST00000569827 ZNF668Q96K58 619 aaPredicted RBP13.77□□□□□ -0.21
CAPN3-220ENST00000569827 RPGRIP1Q96KN7 1286 aa13.77□□□□□ -0.21
CAPN3-220ENST00000569827 ADAM2Q99965 735 aa13.77□□□□□ -0.21
CAPN3-220ENST00000569827 TLE6Q9H808 572 aa13.77□□□□□ -0.21
CAPN3-220ENST00000569827 ERVK-5Q9HDB9 667 aa13.77□□□□□ -0.21
CAPN3-220ENST00000569827 BRPF3Q9ULD4 1205 aa13.77□□□□□ -0.21
CAPN3-220ENST00000569827 PCDHB7Q9Y5E2 793 aa13.77□□□□□ -0.21
CAPN3-220ENST00000569827 SMIM35A0A1B0GVV1 85 aa13.76□□□□□ -0.21
CAPN3-220ENST00000569827 TMEM221A6NGB7 291 aa13.76□□□□□ -0.21
CAPN3-220ENST00000569827 M0R296 226 aa13.76□□□□□ -0.21
CAPN3-220ENST00000569827 RPS6KA5O75582 802 aa13.76□□□□□ -0.21
CAPN3-220ENST00000569827 EYA4O95677 639 aa13.76□□□□□ -0.21
CAPN3-220ENST00000569827 VTNP04004 478 aa13.76□□□□□ -0.21
CAPN3-220ENST00000569827 CALM1P0DP23 149 aa13.76□□□□□ -0.21
CAPN3-220ENST00000569827 CALM2P0DP24 149 aa13.76□□□□□ -0.21
CAPN3-220ENST00000569827 CALM3P0DP25 149 aa13.76□□□□□ -0.21
CAPN3-220ENST00000569827 LIFRP42702 1097 aa13.76□□□□□ -0.21
CAPN3-220ENST00000569827 SARSP49591 514 aaKnown RBP13.76□□□□□ -0.21
CAPN3-220ENST00000569827 ADCY7P51828 1080 aa13.76□□□□□ -0.21
CAPN3-220ENST00000569827 ERVFC1P60507 584 aa13.76□□□□□ -0.21
CAPN3-220ENST00000569827 KIZQ2M2Z5 673 aa13.76□□□□□ -0.21
CAPN3-220ENST00000569827 CEP55Q53EZ4 464 aa13.76□□□□□ -0.21
CAPN3-220ENST00000569827 PLPP4Q5VZY2 271 aa13.76□□□□□ -0.21
CAPN3-220ENST00000569827 LLGL2Q6P1M3 1020 aa13.76□□□□□ -0.21
CAPN3-220ENST00000569827 PLPPR4Q7Z2D5 763 aa13.76□□□□□ -0.21
CAPN3-220ENST00000569827 EDAQ92838 391 aa13.76□□□□□ -0.21
CAPN3-220ENST00000569827 OSMRQ99650 979 aa13.76□□□□□ -0.21
CAPN3-220ENST00000569827 ESYT1Q9BSJ8 1104 aa13.76□□□□□ -0.21
CAPN3-220ENST00000569827 RIC8AQ9NPQ8 531 aa13.76□□□□□ -0.21
CAPN3-220ENST00000569827 ANO2Q9NQ90 1003 aa13.76□□□□□ -0.21
CAPN3-220ENST00000569827 ST3GAL5Q9UNP4 418 aa13.76□□□□□ -0.21
CAPN3-220ENST00000569827 KDM3AQ9Y4C1 1321 aa13.75□□□□□ -0.21
CAPN3-220ENST00000569827 DENND3A2RUS2 1198 aa13.75□□□□□ -0.21
CAPN3-220ENST00000569827 ZBTB42B2RXF5 422 aa13.75□□□□□ -0.21
CAPN3-220ENST00000569827 FGF18O76093 207 aa13.75□□□□□ -0.21
CAPN3-220ENST00000569827 ATP4AP20648 1035 aa13.75□□□□□ -0.21
CAPN3-220ENST00000569827 ZNF76P36508 570 aa13.75□□□□□ -0.21
CAPN3-220ENST00000569827 COASYQ13057 564 aa13.75□□□□□ -0.21
CAPN3-220ENST00000569827 NECTIN1Q15223 517 aa13.75□□□□□ -0.21
CAPN3-220ENST00000569827 JAKMIP3Q5VZ66 844 aa13.75□□□□□ -0.21
CAPN3-220ENST00000569827 APOA5Q6Q788 366 aa13.75□□□□□ -0.21
CAPN3-220ENST00000569827 TRIM67Q6ZTA4 783 aa13.75□□□□□ -0.21
CAPN3-220ENST00000569827 FAM228AQ86W67 206 aa13.75□□□□□ -0.21
CAPN3-220ENST00000569827 THNSL1Q8IYQ7 743 aa13.75□□□□□ -0.21
CAPN3-220ENST00000569827 KIAA0319LQ8IZA0 1049 aa13.75□□□□□ -0.21
CAPN3-220ENST00000569827 TMTC2Q8N394 836 aa13.75□□□□□ -0.21
CAPN3-220ENST00000569827 COLGALT1Q8NBJ5 622 aa13.75□□□□□ -0.21
CAPN3-220ENST00000569827 PPP2R3CQ969Q6 453 aa13.75□□□□□ -0.21
CAPN3-220ENST00000569827 PBXIP1Q96AQ6 731 aa13.75□□□□□ -0.21
CAPN3-220ENST00000569827 MFSD14AQ96MC6 490 aa13.75□□□□□ -0.21
CAPN3-220ENST00000569827 TLR9Q9NR96 1032 aa13.75□□□□□ -0.21
CAPN3-220ENST00000569827 TYW1Q9NV66 732 aaKnown RBP13.75□□□□□ -0.21
CAPN3-220ENST00000569827 FAM86C1Q9NVL1 165 aa13.75□□□□□ -0.21
CAPN3-220ENST00000569827 NAP1L2Q9ULW6 460 aaPredicted RBP13.75□□□□□ -0.21
CAPN3-220ENST00000569827 SQORQ9Y6N5 450 aa13.75□□□□□ -0.21
CAPN3-220ENST00000569827 V9GY48 417 aaPredicted RBP13.75□□□□□ -0.21
CAPN3-220ENST00000569827 SPTBN4Q9H254 2564 aa13.75□□□□□ -0.21
CAPN3-220ENST00000569827 ZFHX2Q9C0A1 2572 aaPredicted RBP13.74□□□□□ -0.21
CAPN3-220ENST00000569827 SMCO2A6NFE2 343 aa13.74□□□□□ -0.21
CAPN3-220ENST00000569827 LOC730098B7Z3J9 87 aa13.74□□□□□ -0.21
CAPN3-220ENST00000569827 FAM86B1E9PN63 330 aa13.74□□□□□ -0.21
CAPN3-220ENST00000569827 MAFGO15525 162 aa13.74□□□□□ -0.21
CAPN3-220ENST00000569827 ATG7O95352 703 aa13.74□□□□□ -0.21
CAPN3-220ENST00000569827 FAM86B2P0C5J1 330 aa13.74□□□□□ -0.21
CAPN3-220ENST00000569827 CDC27P30260 824 aa13.74□□□□□ -0.21
CAPN3-220ENST00000569827 VCPP55072 806 aaKnown RBP13.74□□□□□ -0.21
CAPN3-220ENST00000569827 ZXDAP98168 799 aa13.74□□□□□ -0.21
CAPN3-220ENST00000569827 FUT2Q10981 343 aa13.74□□□□□ -0.21
CAPN3-220ENST00000569827 RTN1Q16799 776 aa13.74□□□□□ -0.21
CAPN3-220ENST00000569827 NAALADL2Q58DX5 795 aa13.74□□□□□ -0.21
CAPN3-220ENST00000569827 SWSAP1Q6NVH7 229 aa13.74□□□□□ -0.21
CAPN3-220ENST00000569827 PDXDC2PQ6P474 469 aa13.74□□□□□ -0.21
CAPN3-220ENST00000569827 ABHD15Q6UXT9 468 aa13.74□□□□□ -0.21
CAPN3-220ENST00000569827 PLA2G4DQ86XP0 818 aa13.74□□□□□ -0.21
CAPN3-220ENST00000569827 METTL13Q8N6R0 699 aa13.74□□□□□ -0.21
CAPN3-220ENST00000569827 ATP8B4Q8TF62 1192 aa13.74□□□□□ -0.21
CAPN3-220ENST00000569827 ZNF302Q9NR11 478 aa13.74□□□□□ -0.21
CAPN3-220ENST00000569827 PCDHB12Q9Y5F1 795 aa13.74□□□□□ -0.21
CAPN3-220ENST00000569827 DENND4AQ7Z401 1863 aa13.74□□□□□ -0.21
CAPN3-220ENST00000569827 IGKV6D-21A0A0A0MT36 114 aa13.73□□□□□ -0.21
CAPN3-220ENST00000569827 GOLGA8AA7E2F4 631 aa13.73□□□□□ -0.21
CAPN3-220ENST00000569827 GOLGA8BA8MQT2 603 aa13.73□□□□□ -0.21
CAPN3-220ENST00000569827 C9IYK1 514 aa13.73□□□□□ -0.21
CAPN3-220ENST00000569827 MEIS1O00470 390 aa13.73□□□□□ -0.21
CAPN3-220ENST00000569827 DHX15O43143 795 aaKnown RBP13.73□□□□□ -0.21
CAPN3-220ENST00000569827 HBP1O60381 514 aa13.73□□□□□ -0.21
CAPN3-220ENST00000569827 C22orf31O95567 290 aa13.73□□□□□ -0.21
CAPN3-220ENST00000569827 SREBF1P36956 1147 aa13.73□□□□□ -0.21
CAPN3-220ENST00000569827 CLCN3P51790 818 aa13.73□□□□□ -0.21
CAPN3-220ENST00000569827 DUSP6Q16828 381 aa13.73□□□□□ -0.21
CAPN3-220ENST00000569827 ADCK5Q3MIX3 580 aa13.73□□□□□ -0.21
CAPN3-220ENST00000569827 FAM160B1Q5W0V3 765 aa13.73□□□□□ -0.21
CAPN3-220ENST00000569827 SGMS1Q86VZ5 419 aa13.73□□□□□ -0.21
CAPN3-220ENST00000569827 CKAP2LQ8IYA6 745 aa13.73□□□□□ -0.21
CAPN3-220ENST00000569827 RASGRP4Q8TDF6 673 aa13.73□□□□□ -0.21
CAPN3-220ENST00000569827 MTA3Q9BTC8 594 aa13.73□□□□□ -0.21
CAPN3-220ENST00000569827 CWH43Q9H720 699 aa13.73□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 19.1 ms