RNA–Protein interactions for RNA: ENST00000569794.1

CHD9-220, Transcript of chromodomain helicase DNA binding protein 9, humanhuman

TSL 5

Gene CHD9, Length 485 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD9-220ENST00000569794 PRAMEF25A6NGN4 478 aa7.26□□□□□ -1.25
CHD9-220ENST00000569794 PYGMP11217 842 aa7.26□□□□□ -1.25
CHD9-220ENST00000569794 MEOX1P50221 254 aa7.26□□□□□ -1.25
CHD9-220ENST00000569794 HERVK_113P62684 666 aa7.26□□□□□ -1.25
CHD9-220ENST00000569794 CD83Q01151 205 aa7.26□□□□□ -1.25
CHD9-220ENST00000569794 KANK2Q63ZY3 851 aa7.26□□□□□ -1.25
CHD9-220ENST00000569794 TMEM200BQ69YZ2 307 aa7.26□□□□□ -1.25
CHD9-220ENST00000569794 PCSK4Q6UW60 755 aa7.26□□□□□ -1.25
CHD9-220ENST00000569794 MTDHQ86UE4 582 aaKnown RBP7.26□□□□□ -1.25
CHD9-220ENST00000569794 OR14K1Q8NGZ2 314 aa7.26□□□□□ -1.25
CHD9-220ENST00000569794 AMNQ9BXJ7 453 aa7.26□□□□□ -1.25
CHD9-220ENST00000569794 HECAQ9UBI9 543 aaPredicted RBP7.26□□□□□ -1.25
CHD9-220ENST00000569794 Q9UFV3 132 aa7.26□□□□□ -1.25
CHD9-220ENST00000569794 CBLCQ9ULV8 474 aa7.26□□□□□ -1.25
CHD9-220ENST00000569794 GIT1Q9Y2X7 761 aa7.26□□□□□ -1.25
CHD9-220ENST00000569794 KRTAP23-1A1A580 65 aa7.25□□□□□ -1.25
CHD9-220ENST00000569794 KRT15P19012 456 aa7.25□□□□□ -1.25
CHD9-220ENST00000569794 ECE1P42892 770 aa7.25□□□□□ -1.25
CHD9-220ENST00000569794 JAM2P57087 298 aa7.25□□□□□ -1.25
CHD9-220ENST00000569794 LRSAM1Q6UWE0 723 aa7.25□□□□□ -1.25
CHD9-220ENST00000569794 EP400NLQ6ZTU2 488 aa7.25□□□□□ -1.25
CHD9-220ENST00000569794 ZNF627Q7L945 461 aa7.25□□□□□ -1.25
CHD9-220ENST00000569794 MAMDC2Q7Z304 686 aaPredicted RBP7.25□□□□□ -1.25
CHD9-220ENST00000569794 MRGPRGQ86SM5 289 aa7.25□□□□□ -1.25
CHD9-220ENST00000569794 DNAJC10Q8IXB1 793 aa7.25□□□□□ -1.25
CHD9-220ENST00000569794 RTKN2Q8IZC4 609 aa7.25□□□□□ -1.25
CHD9-220ENST00000569794 D2HGDHQ8N465 521 aa7.25□□□□□ -1.25
CHD9-220ENST00000569794 PCDHA8Q9Y5H6 950 aa7.25□□□□□ -1.25
CHD9-220ENST00000569794 PMS2P1A4D2B8 440 aa7.24□□□□□ -1.25
CHD9-220ENST00000569794 ZNF561-AS1K7EIQ3 104 aa7.24□□□□□ -1.25
CHD9-220ENST00000569794 ARVCFO00192 962 aa7.24□□□□□ -1.25
CHD9-220ENST00000569794 SLC26A4O43511 780 aa7.24□□□□□ -1.25
CHD9-220ENST00000569794 SPTY2D1Q68D10 685 aaPredicted RBP7.24□□□□□ -1.25
CHD9-220ENST00000569794 C16orf59Q7L2K0 433 aa7.24□□□□□ -1.25
CHD9-220ENST00000569794 TMPRSS6Q8IU80 811 aa7.24□□□□□ -1.25
CHD9-220ENST00000569794 SHCBP1Q8NEM2 672 aa7.24□□□□□ -1.25
CHD9-220ENST00000569794 PTPRN2Q92932 1015 aa7.24□□□□□ -1.25
CHD9-220ENST00000569794 ZNF669Q96BR6 464 aaPredicted RBP7.24□□□□□ -1.25
CHD9-220ENST00000569794 CLIP3Q96DZ5 547 aa7.24□□□□□ -1.25
CHD9-220ENST00000569794 AGAP2Q99490 1192 aa7.24□□□□□ -1.25
CHD9-220ENST00000569794 OR10A5Q9H207 317 aa7.24□□□□□ -1.25
CHD9-220ENST00000569794 AGO3Q9H9G7 860 aaKnown RBP7.24□□□□□ -1.25
CHD9-220ENST00000569794 CAPN14A8MX76 684 aa7.23□□□□□ -1.25
CHD9-220ENST00000569794 CLASP2O75122 1294 aaKnown RBP7.23□□□□□ -1.25
CHD9-220ENST00000569794 MOGSQ13724 837 aa7.23□□□□□ -1.25
CHD9-220ENST00000569794 THEMISQ8N1K5 641 aaPredicted RBP7.23□□□□□ -1.25
CHD9-220ENST00000569794 WDR48Q8TAF3 677 aa7.23□□□□□ -1.25
CHD9-220ENST00000569794 ZG16BQ96DA0 208 aa7.23□□□□□ -1.25
CHD9-220ENST00000569794 TMEM176AQ96HP8 235 aa7.23□□□□□ -1.25
CHD9-220ENST00000569794 SMURF1Q9HCE7 757 aa7.23□□□□□ -1.25
CHD9-220ENST00000569794 PARPBPQ9NWS1 579 aa7.23□□□□□ -1.25
CHD9-220ENST00000569794 UCKL1Q9NWZ5 548 aa7.23□□□□□ -1.25
CHD9-220ENST00000569794 DMRT1Q9Y5R6 373 aa7.23□□□□□ -1.25
CHD9-220ENST00000569794 ST5P78524 1137 aa7.22□□□□□ -1.25
CHD9-220ENST00000569794 SEC23AQ15436 765 aa7.22□□□□□ -1.25
CHD9-220ENST00000569794 CRY1Q16526 586 aa7.22□□□□□ -1.25
CHD9-220ENST00000569794 SCUBE1Q8IWY4 988 aa7.22□□□□□ -1.25
CHD9-220ENST00000569794 SPATA9Q9BWV2 254 aa7.22□□□□□ -1.25
CHD9-220ENST00000569794 FAM184BQ9ULE4 1060 aa7.22□□□□□ -1.25
CHD9-220ENST00000569794 REXO2Q9Y3B8 237 aaKnown RBP7.22□□□□□ -1.25
CHD9-220ENST00000569794 KCNK3O14649 394 aa7.21□□□□□ -1.26
CHD9-220ENST00000569794 CYP27B1O15528 508 aa7.21□□□□□ -1.26
CHD9-220ENST00000569794 PPFIA2O75334 1257 aa7.21□□□□□ -1.26
CHD9-220ENST00000569794 HMGB1P09429 215 aaKnown RBP7.21□□□□□ -1.26
CHD9-220ENST00000569794 SRGAP2CP0DJJ0 459 aa7.21□□□□□ -1.26
CHD9-220ENST00000569794 STAT5BP51692 787 aa7.21□□□□□ -1.26
CHD9-220ENST00000569794 GUCY1A3Q02108 690 aa7.21□□□□□ -1.26
CHD9-220ENST00000569794 RAB33AQ14088 237 aa7.21□□□□□ -1.26
CHD9-220ENST00000569794 RRP1BQ14684 758 aaKnown RBP7.21□□□□□ -1.26
CHD9-220ENST00000569794 Q6ZPA2 131 aa7.21□□□□□ -1.26
CHD9-220ENST00000569794 PRRX2Q99811 253 aa7.21□□□□□ -1.26
CHD9-220ENST00000569794 SLC2A4RGQ9NR83 387 aa7.21□□□□□ -1.26
CHD9-220ENST00000569794 CCDC66A2RUB6 948 aa7.2□□□□□ -1.26
CHD9-220ENST00000569794 GSTA4O15217 222 aa7.2□□□□□ -1.26
CHD9-220ENST00000569794 ADCY3O60266 1144 aa7.2□□□□□ -1.26
CHD9-220ENST00000569794 PEX11BO96011 259 aa7.2□□□□□ -1.26
CHD9-220ENST00000569794 MMEP08473 750 aa7.2□□□□□ -1.26
CHD9-220ENST00000569794 C6orf222P0C671 652 aaPredicted RBP7.2□□□□□ -1.26
CHD9-220ENST00000569794 KRT4P19013 534 aa7.2□□□□□ -1.26
CHD9-220ENST00000569794 GRAMD4Q6IC98 578 aa7.2□□□□□ -1.26
CHD9-220ENST00000569794 ULK2Q8IYT8 1036 aa7.2□□□□□ -1.26
CHD9-220ENST00000569794 CRAMP1Q96RY5 1269 aa7.2□□□□□ -1.26
CHD9-220ENST00000569794 MPHOSPH9Q99550 1183 aa7.2□□□□□ -1.26
CHD9-220ENST00000569794 TTBK1Q5TCY1 1321 aaPredicted RBP7.2□□□□□ -1.26
CHD9-220ENST00000569794 LACTBP83111 547 aaPredicted RBP7.19□□□□□ -1.26
CHD9-220ENST00000569794 CRHR2Q13324 411 aa7.19□□□□□ -1.26
CHD9-220ENST00000569794 RIN1Q13671 783 aa7.19□□□□□ -1.26
CHD9-220ENST00000569794 FAM47CQ5HY64 1035 aa7.19□□□□□ -1.26
CHD9-220ENST00000569794 SPATC1Q76KD6 591 aa7.19□□□□□ -1.26
CHD9-220ENST00000569794 ASB15Q8WXK1 588 aa7.19□□□□□ -1.26
CHD9-220ENST00000569794 ZNF428Q96B54 188 aa7.19□□□□□ -1.26
CHD9-220ENST00000569794 GMLQ99445 158 aa7.19□□□□□ -1.26
CHD9-220ENST00000569794 SH3BP1Q9Y3L3 701 aa7.19□□□□□ -1.26
CHD9-220ENST00000569794 TRBV23-1A0A0A0MS06 115 aa7.18□□□□□ -1.26
CHD9-220ENST00000569794 RAMP2O60895 175 aa7.18□□□□□ -1.26
CHD9-220ENST00000569794 TCF3P15923 654 aa7.18□□□□□ -1.26
CHD9-220ENST00000569794 NAT1P18440 290 aa7.18□□□□□ -1.26
CHD9-220ENST00000569794 CDK11BP21127 795 aaKnown RBP7.18□□□□□ -1.26
CHD9-220ENST00000569794 SUMO1P63165 101 aaKnown RBP7.18□□□□□ -1.26
CHD9-220ENST00000569794 SAFB2Q14151 953 aaKnown RBP eCLIP7.18□□□□□ -1.26
Retrieved 100 of 20,778 RNA–protein pairs in 17 ms