RNA–Protein interactions for RNA: ENST00000569243.5

UBR1-209, Transcript of ubiquitin protein ligase E3 component n-recognin 1, human

TSL 3

Gene UBR1, Length 702 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
UBR1-209	ENST00000569243	BLACE	A4D250	179 aa		5.38	□□□□□ -1.55
UBR1-209	ENST00000569243	ARVCF	O00192	962 aa		5.38	□□□□□ -1.55
UBR1-209	ENST00000569243	ZNF888	P0CJ79	500 aa	Predicted RBP	5.38	□□□□□ -1.55
UBR1-209	ENST00000569243	CR2	P20023	1033 aa		5.38	□□□□□ -1.55
UBR1-209	ENST00000569243	HIBADH	P31937	336 aa	Known RBP	5.38	□□□□□ -1.55
UBR1-209	ENST00000569243	TOP3A	Q13472	1001 aa	Predicted RBP	5.38	□□□□□ -1.55
UBR1-209	ENST00000569243	RPUSD2	Q8IZ73	545 aa	Known RBP	5.38	□□□□□ -1.55
UBR1-209	ENST00000569243	GPR150	Q8NGU9	434 aa		5.38	□□□□□ -1.55
UBR1-209	ENST00000569243	PCDH19	Q8TAB3	1148 aa		5.38	□□□□□ -1.55
UBR1-209	ENST00000569243	NTN5	Q8WTR8	489 aa	Predicted RBP	5.38	□□□□□ -1.55
UBR1-209	ENST00000569243	CDC6	Q99741	560 aa		5.38	□□□□□ -1.55
UBR1-209	ENST00000569243	DPYSL5	Q9BPU6	564 aa		5.38	□□□□□ -1.55
UBR1-209	ENST00000569243	ZNF703	Q9H7S9	590 aa	Predicted RBP	5.38	□□□□□ -1.55
UBR1-209	ENST00000569243	SIRPG	Q9P1W8	387 aa		5.38	□□□□□ -1.55
UBR1-209	ENST00000569243	CEP72	Q9P209	647 aa		5.38	□□□□□ -1.55
UBR1-209	ENST00000569243	OAZ3	Q9UMX2	235 aa		5.38	□□□□□ -1.55
UBR1-209	ENST00000569243	ATP23	Q9Y6H3	246 aa		5.38	□□□□□ -1.55
UBR1-209	ENST00000569243	TMEM191C	A6NGB0	347 aa		5.37	□□□□□ -1.55
UBR1-209	ENST00000569243	FAM90A27P	A6NNH2	459 aa		5.37	□□□□□ -1.55
UBR1-209	ENST00000569243	ETV4	P43268	484 aa		5.37	□□□□□ -1.55
UBR1-209	ENST00000569243	LACTB	P83111	547 aa	Predicted RBP	5.37	□□□□□ -1.55
UBR1-209	ENST00000569243	STIL	Q15468	1287 aa		5.37	□□□□□ -1.55
UBR1-209	ENST00000569243	MTERF2	Q49AM1	385 aa		5.37	□□□□□ -1.55
UBR1-209	ENST00000569243	FAM47C	Q5HY64	1035 aa		5.37	□□□□□ -1.55
UBR1-209	ENST00000569243	MTDH	Q86UE4	582 aa	Known RBP	5.37	□□□□□ -1.55
UBR1-209	ENST00000569243	ARMC5	Q96C12	935 aa		5.37	□□□□□ -1.55
UBR1-209	ENST00000569243	TACO1	Q9BSH4	297 aa	Known RBP	5.37	□□□□□ -1.55
UBR1-209	ENST00000569243	ARHGAP28	Q9P2N2	729 aa		5.37	□□□□□ -1.55
UBR1-209	ENST00000569243	MAN2B1	O00754	1011 aa		5.36	□□□□□ -1.55
UBR1-209	ENST00000569243	CDC14B	O60729	498 aa		5.36	□□□□□ -1.55
UBR1-209	ENST00000569243	CLASP2	O75122	1294 aa	Known RBP	5.36	□□□□□ -1.55
UBR1-209	ENST00000569243	C6orf222	P0C671	652 aa	Predicted RBP	5.36	□□□□□ -1.55
UBR1-209	ENST00000569243	PDE6A	P16499	860 aa		5.36	□□□□□ -1.55
UBR1-209	ENST00000569243	GUCY1A3	Q02108	690 aa		5.36	□□□□□ -1.55
UBR1-209	ENST00000569243	SSRP1	Q08945	709 aa	Known RBP	5.36	□□□□□ -1.55
UBR1-209	ENST00000569243	NFYC	Q13952	458 aa		5.36	□□□□□ -1.55
UBR1-209	ENST00000569243	CRY1	Q16526	586 aa		5.36	□□□□□ -1.55
UBR1-209	ENST00000569243	PAPD7	Q5XG87	772 aa	Known RBP	5.36	□□□□□ -1.55
UBR1-209	ENST00000569243	EP400NL	Q6ZTU2	488 aa		5.36	□□□□□ -1.55
UBR1-209	ENST00000569243	SPATC1	Q76KD6	591 aa		5.36	□□□□□ -1.55
UBR1-209	ENST00000569243	WNK4	Q96J92	1243 aa		5.36	□□□□□ -1.55
UBR1-209	ENST00000569243	CD244	Q9BZW8	370 aa		5.36	□□□□□ -1.55
UBR1-209	ENST00000569243	ZDHHC5	Q9C0B5	715 aa		5.36	□□□□□ -1.55
UBR1-209	ENST00000569243	TLR9	Q9NR96	1032 aa		5.36	□□□□□ -1.55
UBR1-209	ENST00000569243	CATSPERZ	Q9NTU4	200 aa		5.36	□□□□□ -1.55
UBR1-209	ENST00000569243	GALNT8	Q9NY28	637 aa		5.36	□□□□□ -1.55
UBR1-209	ENST00000569243	TRAF6	Q9Y4K3	522 aa		5.36	□□□□□ -1.55
UBR1-209	ENST00000569243	ZNF561-AS1	K7EIQ3	104 aa		5.35	□□□□□ -1.55
UBR1-209	ENST00000569243	AMY2A	P04746	511 aa		5.35	□□□□□ -1.55
UBR1-209	ENST00000569243	APP	P05067	770 aa		5.35	□□□□□ -1.55
UBR1-209	ENST00000569243	AMY2B	P19961	511 aa		5.35	□□□□□ -1.55
UBR1-209	ENST00000569243	PTGS1	P23219	599 aa		5.35	□□□□□ -1.55
UBR1-209	ENST00000569243	AOAH	P28039	575 aa		5.35	□□□□□ -1.55
UBR1-209	ENST00000569243	EIF4H	Q15056	248 aa	Known RBP	5.35	□□□□□ -1.55
UBR1-209	ENST00000569243	RNF151	Q2KHN1	245 aa		5.35	□□□□□ -1.55
UBR1-209	ENST00000569243	OSTM1	Q86WC4	334 aa		5.35	□□□□□ -1.55
UBR1-209	ENST00000569243	DHRS4	Q9BTZ2	278 aa		5.35	□□□□□ -1.55
UBR1-209	ENST00000569243	HIRIP3	Q9BW71	556 aa	Predicted RBP	5.35	□□□□□ -1.55
UBR1-209	ENST00000569243	BTBD2	Q9BX70	525 aa		5.35	□□□□□ -1.55
UBR1-209	ENST00000569243	PLA2G12B	Q9BX93	195 aa		5.35	□□□□□ -1.55
UBR1-209	ENST00000569243	SLC39A2	Q9NP94	309 aa		5.35	□□□□□ -1.55
UBR1-209	ENST00000569243	INCENP	Q9NQS7	918 aa		5.35	□□□□□ -1.55
UBR1-209	ENST00000569243	RIC8B	Q9NVN3	520 aa		5.35	□□□□□ -1.55
UBR1-209	ENST00000569243	CCDC163	A0A0D9SF12	145 aa		5.34	□□□□□ -1.55
UBR1-209	ENST00000569243	ESYT3	A0FGR9	886 aa		5.34	□□□□□ -1.55
UBR1-209	ENST00000569243	PMS2P1	A4D2B8	440 aa		5.34	□□□□□ -1.55
UBR1-209	ENST00000569243		E9PSI1	815 aa		5.34	□□□□□ -1.55
UBR1-209	ENST00000569243	EFCAB14	O75071	495 aa		5.34	□□□□□ -1.55
UBR1-209	ENST00000569243	MAF	O75444	373 aa	Predicted RBP	5.34	□□□□□ -1.55
UBR1-209	ENST00000569243	ZNF37A	P17032	561 aa	Predicted RBP	5.34	□□□□□ -1.55
UBR1-209	ENST00000569243	ATP2B1	P20020	1258 aa		5.34	□□□□□ -1.55
UBR1-209	ENST00000569243	ST5	P78524	1137 aa		5.34	□□□□□ -1.55
UBR1-209	ENST00000569243	NOLC1	Q14978	699 aa	Known RBP eCLIP	5.34	□□□□□ -1.55
UBR1-209	ENST00000569243	FAM209A	Q5JX71	171 aa		5.34	□□□□□ -1.55
UBR1-209	ENST00000569243	ZNF428	Q96B54	188 aa		5.34	□□□□□ -1.55
UBR1-209	ENST00000569243	RIOX1	Q9H6W3	641 aa		5.34	□□□□□ -1.55
UBR1-209	ENST00000569243	AURKAIP1	Q9NWT8	199 aa	Predicted RBP	5.34	□□□□□ -1.55
UBR1-209	ENST00000569243	BTBD7	Q9P203	1132 aa		5.34	□□□□□ -1.55
UBR1-209	ENST00000569243	PCDHA8	Q9Y5H6	950 aa		5.34	□□□□□ -1.55
UBR1-209	ENST00000569243	LOC107983988	A0A1B0GUW6	1196 aa	Predicted RBP	5.33	□□□□□ -1.56
UBR1-209	ENST00000569243	INO80B-WBP1	J3KQ70	363 aa		5.33	□□□□□ -1.56
UBR1-209	ENST00000569243	C4BPA	P04003	597 aa	Known RBP	5.33	□□□□□ -1.56
UBR1-209	ENST00000569243	PROZ	P22891	400 aa		5.33	□□□□□ -1.56
UBR1-209	ENST00000569243	RPS19	P39019	145 aa	Known RBP	5.33	□□□□□ -1.56
UBR1-209	ENST00000569243	FOXL1	Q12952	345 aa		5.33	□□□□□ -1.56
UBR1-209	ENST00000569243	DUSP8	Q13202	625 aa		5.33	□□□□□ -1.56
UBR1-209	ENST00000569243	WDR72	Q3MJ13	1102 aa		5.33	□□□□□ -1.56
UBR1-209	ENST00000569243	NAALADL2	Q58DX5	795 aa		5.33	□□□□□ -1.56
UBR1-209	ENST00000569243	ZNF362	Q5T0B9	420 aa	Predicted RBP	5.33	□□□□□ -1.56
UBR1-209	ENST00000569243	TRIM68	Q6AZZ1	485 aa		5.33	□□□□□ -1.56
UBR1-209	ENST00000569243	GAREM2	Q75VX8	874 aa		5.33	□□□□□ -1.56
UBR1-209	ENST00000569243	PTRH1	Q86Y79	214 aa	Known RBP	5.33	□□□□□ -1.56
UBR1-209	ENST00000569243	INO80B	Q9C086	356 aa	Predicted RBP	5.33	□□□□□ -1.56
UBR1-209	ENST00000569243	C12orf65	Q9H3J6	166 aa	Known RBP	5.33	□□□□□ -1.56
UBR1-209	ENST00000569243	PARPBP	Q9NWS1	579 aa		5.33	□□□□□ -1.56
UBR1-209	ENST00000569243	CBLC	Q9ULV8	474 aa		5.33	□□□□□ -1.56
UBR1-209	ENST00000569243	CCDC66	A2RUB6	948 aa		5.32	□□□□□ -1.56
UBR1-209	ENST00000569243	KCNQ2	O43526	872 aa		5.32	□□□□□ -1.56
UBR1-209	ENST00000569243	NPTXR	O95502	500 aa		5.32	□□□□□ -1.56
UBR1-209	ENST00000569243	PYGM	P11217	842 aa		5.32	□□□□□ -1.56

Retrieved 100 of 20,778 RNA–protein pairs in 28.8 ms