RNA–Protein interactions for RNA: ENST00000569240.5

CNOT1-216, Transcript of CCR4-NOT transcription complex subunit 1, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene CNOT1, Length 7,660 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT1-216ENST00000569240 TNNQ9UQP3 1299 aa7.61□□□□□ -1.19
CNOT1-216ENST00000569240 ARPC4P59998 168 aa7.61□□□□□ -1.19
CNOT1-216ENST00000569240 REXO1Q8N1G1 1221 aaKnown RBP7.61□□□□□ -1.19
CNOT1-216ENST00000569240 KCTD17Q8N5Z5 321 aa7.61□□□□□ -1.19
CNOT1-216ENST00000569240 OTUD7AQ8TE49 926 aaPredicted RBP7.61□□□□□ -1.19
CNOT1-216ENST00000569240 UBAP1Q9NZ09 502 aa7.61□□□□□ -1.19
CNOT1-216ENST00000569240 MBD2Q9UBB5 411 aa7.61□□□□□ -1.19
CNOT1-216ENST00000569240 CDK13Q14004 1512 aaKnown RBP7.61□□□□□ -1.19
CNOT1-216ENST00000569240 GNGT2O14610 69 aa7.61□□□□□ -1.19
CNOT1-216ENST00000569240 GPAA1O43292 621 aa7.61□□□□□ -1.19
CNOT1-216ENST00000569240 TTLL1O95922 423 aa7.61□□□□□ -1.19
CNOT1-216ENST00000569240 YWHAGP61981 247 aaKnown RBP eCLIP7.61□□□□□ -1.19
CNOT1-216ENST00000569240 KRT76Q01546 638 aa7.61□□□□□ -1.19
CNOT1-216ENST00000569240 LETM2Q2VYF4 491 aa7.61□□□□□ -1.19
CNOT1-216ENST00000569240 VPS50Q96JG6 964 aa7.61□□□□□ -1.19
CNOT1-216ENST00000569240 SH3GLB2Q9NR46 395 aa7.61□□□□□ -1.19
CNOT1-216ENST00000569240 OLFML3Q9NRN5 406 aa7.61□□□□□ -1.19
CNOT1-216ENST00000569240 CHPF2Q9P2E5 772 aa7.61□□□□□ -1.19
CNOT1-216ENST00000569240 FAM47DPA6NHR8 397 aa7.61□□□□□ -1.19
CNOT1-216ENST00000569240 ZBTB22O15209 634 aa7.61□□□□□ -1.19
CNOT1-216ENST00000569240 MYBL1P10243 752 aa7.61□□□□□ -1.19
CNOT1-216ENST00000569240 PTK2Q05397 1052 aa7.61□□□□□ -1.19
CNOT1-216ENST00000569240 LBRQ14739 615 aaKnown RBP7.61□□□□□ -1.19
CNOT1-216ENST00000569240 DACT3Q96B18 629 aaPredicted RBP7.61□□□□□ -1.19
CNOT1-216ENST00000569240 GORASP1Q9BQQ3 440 aa7.61□□□□□ -1.19
CNOT1-216ENST00000569240 SNX25Q9H3E2 840 aa7.61□□□□□ -1.19
CNOT1-216ENST00000569240 V9GY48 417 aaPredicted RBP7.61□□□□□ -1.19
CNOT1-216ENST00000569240 PLEKHG1Q9ULL1 1385 aa7.61□□□□□ -1.19
CNOT1-216ENST00000569240 POC1B-GALNT4F8VUJ3 575 aa7.61□□□□□ -1.19
CNOT1-216ENST00000569240 FOSP01100 380 aaPredicted RBP7.61□□□□□ -1.19
CNOT1-216ENST00000569240 ECE1P42892 770 aa7.61□□□□□ -1.19
CNOT1-216ENST00000569240 ADAM9Q13443 819 aa7.61□□□□□ -1.19
CNOT1-216ENST00000569240 LONP2Q86WA8 852 aa7.61□□□□□ -1.19
CNOT1-216ENST00000569240 FANCBQ8NB91 859 aa7.61□□□□□ -1.19
CNOT1-216ENST00000569240 OLFM1Q99784 485 aa7.61□□□□□ -1.19
CNOT1-216ENST00000569240 C1orf112Q9NSG2 853 aa7.61□□□□□ -1.19
CNOT1-216ENST00000569240 CNOT7Q9UIV1 285 aaKnown RBP7.61□□□□□ -1.19
CNOT1-216ENST00000569240 TNKSO95271 1327 aa7.6□□□□□ -1.19
CNOT1-216ENST00000569240 ADGRF5Q8IZF2 1346 aa7.6□□□□□ -1.19
CNOT1-216ENST00000569240 WDR17Q8IZU2 1322 aa7.6□□□□□ -1.19
CNOT1-216ENST00000569240 ARHGEF35A5YM69 484 aa7.6□□□□□ -1.19
CNOT1-216ENST00000569240 AP3B1O00203 1094 aa7.6□□□□□ -1.19
CNOT1-216ENST00000569240 ORC4O43929 436 aa7.6□□□□□ -1.19
CNOT1-216ENST00000569240 SERPINB9P50453 376 aa7.6□□□□□ -1.19
CNOT1-216ENST00000569240 NECTIN1Q15223 517 aa7.6□□□□□ -1.19
CNOT1-216ENST00000569240 NXNQ6DKJ4 435 aa7.6□□□□□ -1.19
CNOT1-216ENST00000569240 STKLD1Q8NE28 680 aa7.6□□□□□ -1.19
CNOT1-216ENST00000569240 SNF8Q96H20 258 aa7.6□□□□□ -1.19
CNOT1-216ENST00000569240 PLGRKTQ9HBL7 147 aa7.6□□□□□ -1.19
CNOT1-216ENST00000569240 RXFP1Q9HBX9 757 aa7.6□□□□□ -1.19
CNOT1-216ENST00000569240 MOCS3O95396 460 aa7.6□□□□□ -1.19
CNOT1-216ENST00000569240 CHEK2O96017 543 aa7.6□□□□□ -1.19
CNOT1-216ENST00000569240 CPA1P15085 419 aa7.6□□□□□ -1.19
CNOT1-216ENST00000569240 MLH1P40692 756 aa7.6□□□□□ -1.19
CNOT1-216ENST00000569240 ACADVLP49748 655 aa7.6□□□□□ -1.19
CNOT1-216ENST00000569240 TMPRSS15P98073 1019 aa7.6□□□□□ -1.19
CNOT1-216ENST00000569240 GPR141Q7Z602 305 aa7.6□□□□□ -1.19
CNOT1-216ENST00000569240 NME9Q86XW9 330 aa7.6□□□□□ -1.19
CNOT1-216ENST00000569240 ZNF654Q8IZM8 581 aa7.6□□□□□ -1.19
CNOT1-216ENST00000569240 SYMPKQ92797 1274 aaKnown RBP7.6□□□□□ -1.19
CNOT1-216ENST00000569240 ZKSCAN4Q969J2 545 aaPredicted RBP7.6□□□□□ -1.19
CNOT1-216ENST00000569240 CCT7Q99832 543 aa7.6□□□□□ -1.19
CNOT1-216ENST00000569240 METTL22Q9BUU2 404 aaPredicted RBP7.6□□□□□ -1.19
CNOT1-216ENST00000569240 EIF4ENIF1Q9NRA8 985 aaKnown RBP7.6□□□□□ -1.19
CNOT1-216ENST00000569240 FBXL5Q9UKA1 691 aa7.6□□□□□ -1.19
CNOT1-216ENST00000569240 SH3GLB1Q9Y371 365 aa7.6□□□□□ -1.19
CNOT1-216ENST00000569240 IGF2BP3O00425 579 aaKnown RBP eCLIP7.6□□□□□ -1.191e-9■■■□□ 16.3
CNOT1-216ENST00000569240 BIRC5O15392 142 aa7.6□□□□□ -1.19
CNOT1-216ENST00000569240 PSMC2P35998 433 aaKnown RBP7.6□□□□□ -1.19
CNOT1-216ENST00000569240 ABCE1P61221 599 aaKnown RBP7.6□□□□□ -1.19
CNOT1-216ENST00000569240 AASDHQ4L235 1098 aaPredicted RBP7.6□□□□□ -1.19
CNOT1-216ENST00000569240 PAPD7Q5XG87 772 aaKnown RBP7.6□□□□□ -1.19
CNOT1-216ENST00000569240 C4orf22Q6V702 233 aa7.6□□□□□ -1.19
CNOT1-216ENST00000569240 RGS9BPQ6ZS82 235 aa7.6□□□□□ -1.19
CNOT1-216ENST00000569240 FUKQ8N0W3 1084 aa7.6□□□□□ -1.19
CNOT1-216ENST00000569240 PYROXD1Q8WU10 500 aa7.6□□□□□ -1.19
CNOT1-216ENST00000569240 DHX38Q92620 1227 aaKnown RBP7.6□□□□□ -1.19
CNOT1-216ENST00000569240 C19orf60Q96EN9 201 aa7.6□□□□□ -1.19
CNOT1-216ENST00000569240 ASCC2Q9H1I8 757 aaPredicted RBP7.6□□□□□ -1.19
CNOT1-216ENST00000569240 COPRSQ9NQ92 184 aa7.6□□□□□ -1.19
CNOT1-216ENST00000569240 TLK1Q9UKI8 766 aa7.6□□□□□ -1.19
CNOT1-216ENST00000569240 TJP3O95049 919 aa7.6□□□□□ -1.19
CNOT1-216ENST00000569240 TNFAIP8O95379 198 aa7.6□□□□□ -1.19
CNOT1-216ENST00000569240 TAC1P20366 129 aa7.6□□□□□ -1.19
CNOT1-216ENST00000569240 KBTBD12Q3ZCT8 623 aa7.6□□□□□ -1.19
CNOT1-216ENST00000569240 FIGNQ5HY92 759 aa7.6□□□□□ -1.19
CNOT1-216ENST00000569240 STAG2Q8N3U4 1231 aa7.6□□□□□ -1.19
CNOT1-216ENST00000569240 SPATA5Q8NB90 893 aa7.6□□□□□ -1.19
CNOT1-216ENST00000569240 PARVGQ9HBI0 331 aa7.6□□□□□ -1.19
CNOT1-216ENST00000569240 GOLGA8IPA6NC78 632 aa7.6□□□□□ -1.19
CNOT1-216ENST00000569240 CD2BP2O95400 341 aaKnown RBP7.6□□□□□ -1.19
CNOT1-216ENST00000569240 KRT7P08729 469 aa7.6□□□□□ -1.19
CNOT1-216ENST00000569240 PTPN4P29074 926 aa7.6□□□□□ -1.19
CNOT1-216ENST00000569240 TFCP2Q12800 502 aa7.6□□□□□ -1.19
CNOT1-216ENST00000569240 PRR23BQ6ZRT6 265 aa7.6□□□□□ -1.19
CNOT1-216ENST00000569240 EGFL6Q8IUX8 553 aa7.6□□□□□ -1.19
CNOT1-216ENST00000569240 ZNF398Q8TD17 642 aa7.6□□□□□ -1.19
CNOT1-216ENST00000569240 RSPH1Q8WYR4 309 aa7.6□□□□□ -1.19
CNOT1-216ENST00000569240 NCOA5Q9HCD5 579 aaKnown RBP7.6□□□□□ -1.19
CNOT1-216ENST00000569240 CLIC4Q9Y696 253 aa7.6□□□□□ -1.19
Retrieved 100 of 20,778 RNA–protein pairs in 18.5 ms