RNA–Protein interactions for RNA: ENST00000569140.1

CDT1-203, Transcript of chromatin licensing and DNA replication factor 1, humanhuman

TSL 3

Gene CDT1, Length 571 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDT1-203ENST00000569140 SCLT1Q96NL6 688 aa14.35□□□□□ -0.11
CDT1-203ENST00000569140 RAB34Q9BZG1 259 aa14.35□□□□□ -0.11
CDT1-203ENST00000569140 ZSWIM4Q9H7M6 989 aa14.35□□□□□ -0.11
CDT1-203ENST00000569140 BMP2KQ9NSY1 1161 aaPredicted RBP14.35□□□□□ -0.11
CDT1-203ENST00000569140 MTMR6Q9Y217 621 aa14.35□□□□□ -0.11
CDT1-203ENST00000569140 AKT3Q9Y243 479 aa14.35□□□□□ -0.11
CDT1-203ENST00000569140 CDY2AQ9Y6F7 541 aa14.35□□□□□ -0.11
CDT1-203ENST00000569140 WDR81Q562E7 1941 aa14.35□□□□□ -0.11
CDT1-203ENST00000569140 SMIM35A0A1B0GVV1 85 aa14.34□□□□□ -0.11
CDT1-203ENST00000569140 ZBTB42B2RXF5 422 aa14.34□□□□□ -0.11
CDT1-203ENST00000569140 LAD1O00515 517 aa14.34□□□□□ -0.11
CDT1-203ENST00000569140 MAGEB2O15479 319 aa14.34□□□□□ -0.11
CDT1-203ENST00000569140 NBNO60934 754 aa14.34□□□□□ -0.11
CDT1-203ENST00000569140 RPLP2P05387 115 aaKnown RBP14.34□□□□□ -0.11
CDT1-203ENST00000569140 TMOD1P28289 359 aa14.34□□□□□ -0.11
CDT1-203ENST00000569140 YWHABP31946 246 aaKnown RBP14.34□□□□□ -0.11
CDT1-203ENST00000569140 MRPS6P82932 125 aaKnown RBP14.34□□□□□ -0.11
CDT1-203ENST00000569140 CEBPZQ03701 1054 aaKnown RBP14.34□□□□□ -0.11
CDT1-203ENST00000569140 RESTQ13127 1097 aa14.34□□□□□ -0.11
CDT1-203ENST00000569140 XKR9Q5GH70 373 aa14.34□□□□□ -0.11
CDT1-203ENST00000569140 IER5Q5VY09 327 aa14.34□□□□□ -0.11
CDT1-203ENST00000569140 HAUS3Q68CZ6 603 aa14.34□□□□□ -0.11
CDT1-203ENST00000569140 EFCAB12Q6NXP0 572 aa14.34□□□□□ -0.11
CDT1-203ENST00000569140 DTHD1Q6ZMT9 781 aa14.34□□□□□ -0.11
CDT1-203ENST00000569140 C16orf59Q7L2K0 433 aa14.34□□□□□ -0.11
CDT1-203ENST00000569140 CEP170P1Q96L14 293 aa14.34□□□□□ -0.11
CDT1-203ENST00000569140 MAP7D2Q96T17 732 aa14.34□□□□□ -0.11
CDT1-203ENST00000569140 WRAP73Q9P2S5 460 aaPredicted RBP14.34□□□□□ -0.11
CDT1-203ENST00000569140 LRWD1Q9UFC0 647 aa14.34□□□□□ -0.11
CDT1-203ENST00000569140 TRPV2Q9Y5S1 764 aa14.34□□□□□ -0.11
CDT1-203ENST00000569140 VWA3AA6NCI4 1184 aa14.33□□□□□ -0.12
CDT1-203ENST00000569140 VTNP04004 478 aa14.33□□□□□ -0.12
CDT1-203ENST00000569140 GHRP10912 638 aa14.33□□□□□ -0.12
CDT1-203ENST00000569140 CCT6AP40227 531 aaKnown RBP14.33□□□□□ -0.12
CDT1-203ENST00000569140 POLGP54098 1239 aaPredicted RBP14.33□□□□□ -0.12
CDT1-203ENST00000569140 NPEPPSP55786 919 aa14.33□□□□□ -0.12
CDT1-203ENST00000569140 SF3A1Q15459 793 aaKnown RBP14.33□□□□□ -0.12
CDT1-203ENST00000569140 ZRSR1Q15695 479 aaKnown RBP14.33□□□□□ -0.12
CDT1-203ENST00000569140 FAM173BQ6P4H8 233 aa14.33□□□□□ -0.12
CDT1-203ENST00000569140 ANO5Q75V66 913 aa14.33□□□□□ -0.12
CDT1-203ENST00000569140 OTUD6AQ7L8S5 288 aa14.33□□□□□ -0.12
CDT1-203ENST00000569140 C4orf19Q8IY42 314 aa14.33□□□□□ -0.12
CDT1-203ENST00000569140 C4orf32Q8N8J7 132 aa14.33□□□□□ -0.12
CDT1-203ENST00000569140 SNX29Q8TEQ0 813 aa14.33□□□□□ -0.12
CDT1-203ENST00000569140 NIFKQ9BYG3 293 aaKnown RBP14.33□□□□□ -0.12
CDT1-203ENST00000569140 CYP26B1Q9NR63 512 aa14.33□□□□□ -0.12
CDT1-203ENST00000569140 A0A087WWV3 80 aa14.32□□□□□ -0.12
CDT1-203ENST00000569140 SLITRK3O94933 977 aa14.32□□□□□ -0.12
CDT1-203ENST00000569140 CHRNA1P02708 482 aa14.32□□□□□ -0.12
CDT1-203ENST00000569140 PRPHP41219 470 aa14.32□□□□□ -0.12
CDT1-203ENST00000569140 KCNJ6P48051 423 aa14.32□□□□□ -0.12
CDT1-203ENST00000569140 FXR2P51116 673 aaKnown RBP eCLIP14.32□□□□□ -0.12
CDT1-203ENST00000569140 ATP2C1P98194 919 aaPredicted RBP14.32□□□□□ -0.12
CDT1-203ENST00000569140 MBTPS1Q14703 1052 aa14.32□□□□□ -0.12
CDT1-203ENST00000569140 FOXD4L6Q3SYB3 417 aaPredicted RBP14.32□□□□□ -0.12
CDT1-203ENST00000569140 CNKSR3Q6P9H4 555 aa14.32□□□□□ -0.12
CDT1-203ENST00000569140 TRAF7Q6Q0C0 670 aa14.32□□□□□ -0.12
CDT1-203ENST00000569140 POTEGQ6S5H5 508 aa14.32□□□□□ -0.12
CDT1-203ENST00000569140 FOXD4L3Q6VB84 417 aaPredicted RBP14.32□□□□□ -0.12
CDT1-203ENST00000569140 SLC7A3Q8WY07 619 aa14.32□□□□□ -0.12
CDT1-203ENST00000569140 HERVK_113Q902F9 699 aa14.32□□□□□ -0.12
CDT1-203ENST00000569140 SEPT8Q92599 483 aa14.32□□□□□ -0.12
CDT1-203ENST00000569140 ZNF668Q96K58 619 aaPredicted RBP14.32□□□□□ -0.12
CDT1-203ENST00000569140 ZSCAN16Q9H4T2 348 aaPredicted RBP14.32□□□□□ -0.12
CDT1-203ENST00000569140 TUFT1Q9NNX1 390 aa14.32□□□□□ -0.12
CDT1-203ENST00000569140 SLC4A7Q9Y6M7 1214 aa14.32□□□□□ -0.12
CDT1-203ENST00000569140 PP2D1A8MPX8 630 aa14.31□□□□□ -0.12
CDT1-203ENST00000569140 ZBTB39O15060 712 aa14.31□□□□□ -0.12
CDT1-203ENST00000569140 MED24O75448 989 aa14.31□□□□□ -0.12
CDT1-203ENST00000569140 STBD1O95210 358 aa14.31□□□□□ -0.12
CDT1-203ENST00000569140 BMP15O95972 392 aa14.31□□□□□ -0.12
CDT1-203ENST00000569140 DNM2P50570 870 aa14.31□□□□□ -0.12
CDT1-203ENST00000569140 MGAT3Q09327 533 aa14.31□□□□□ -0.12
CDT1-203ENST00000569140 IKBKEQ14164 716 aa14.31□□□□□ -0.12
CDT1-203ENST00000569140 KIZQ2M2Z5 673 aa14.31□□□□□ -0.12
CDT1-203ENST00000569140 FAM26DQ5JW98 314 aa14.31□□□□□ -0.12
CDT1-203ENST00000569140 KRT79Q5XKE5 535 aa14.31□□□□□ -0.12
CDT1-203ENST00000569140 RPAINQ86UA6 219 aa14.31□□□□□ -0.12
CDT1-203ENST00000569140 CATSPER3Q86XQ3 398 aa14.31□□□□□ -0.12
CDT1-203ENST00000569140 KIAA0319LQ8IZA0 1049 aa14.31□□□□□ -0.12
CDT1-203ENST00000569140 NME8Q8N427 588 aa14.31□□□□□ -0.12
CDT1-203ENST00000569140 ZNF579Q8NAF0 562 aaKnown RBP14.31□□□□□ -0.12
CDT1-203ENST00000569140 RASSF8Q8NHQ8 419 aa14.31□□□□□ -0.12
CDT1-203ENST00000569140 PIGOQ8TEQ8 1089 aa14.31□□□□□ -0.12
CDT1-203ENST00000569140 HSD17B14Q9BPX1 270 aa14.31□□□□□ -0.12
CDT1-203ENST00000569140 JPH2Q9BR39 696 aaPredicted RBP14.31□□□□□ -0.12
CDT1-203ENST00000569140 IFIH1Q9BYX4 1025 aaKnown RBP14.31□□□□□ -0.12
CDT1-203ENST00000569140 CELF4Q9BZC1 486 aaKnown RBP14.31□□□□□ -0.12
CDT1-203ENST00000569140 CXXC1Q9P0U4 656 aaPredicted RBP14.31□□□□□ -0.12
CDT1-203ENST00000569140 CLIC4Q9Y696 253 aa14.31□□□□□ -0.12
CDT1-203ENST00000569140 SIP14410 1827 aa14.3□□□□□ -0.12
CDT1-203ENST00000569140 CXCL10P02778 98 aa14.3□□□□□ -0.12
CDT1-203ENST00000569140 ZSCAN22P10073 491 aaPredicted RBP14.3□□□□□ -0.12
CDT1-203ENST00000569140 IBSPP21815 317 aaPredicted RBP14.3□□□□□ -0.12
CDT1-203ENST00000569140 RFC5P40937 340 aa14.3□□□□□ -0.12
CDT1-203ENST00000569140 PAK2Q13177 524 aa14.3□□□□□ -0.12
CDT1-203ENST00000569140 GPNMBQ14956 572 aa14.3□□□□□ -0.12
CDT1-203ENST00000569140 EMC2Q15006 297 aa14.3□□□□□ -0.12
CDT1-203ENST00000569140 TARBP2Q15633 366 aaKnown RBP14.3□□□□□ -0.12
CDT1-203ENST00000569140 DBF4BQ8NFT6 615 aa14.3□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 19.1 ms