RNA–Protein interactions for RNA: ENST00000568129.1

HDGFL3-205, Transcript of HDGF like 3, humanhuman

TSL 2

Gene HDGFL3, Length 426 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDGFL3-205ENST00000568129 ZBTB10Q96DT7 871 aa9.23□□□□□ -0.93
HDGFL3-205ENST00000568129 CELF4Q9BZC1 486 aaKnown RBP9.23□□□□□ -0.93
HDGFL3-205ENST00000568129 BRMS1Q9HCU9 246 aa9.23□□□□□ -0.93
HDGFL3-205ENST00000568129 NRBP2Q9NSY0 501 aa9.23□□□□□ -0.93
HDGFL3-205ENST00000568129 CEP131Q9UPN4 1083 aa9.23□□□□□ -0.93
HDGFL3-205ENST00000568129 TRPC6Q9Y210 931 aa9.23□□□□□ -0.93
HDGFL3-205ENST00000568129 CDY2AQ9Y6F7 541 aa9.23□□□□□ -0.93
HDGFL3-205ENST00000568129 EYSQ5T1H1 3165 aa9.22□□□□□ -0.93
HDGFL3-205ENST00000568129 PRUNE2Q8WUY3 3088 aa9.22□□□□□ -0.93
HDGFL3-205ENST00000568129 PRRC2BQ5JSZ5 2229 aaKnown RBP9.22□□□□□ -0.93
HDGFL3-205ENST00000568129 ZBBXA8MT70 800 aa9.22□□□□□ -0.93
HDGFL3-205ENST00000568129 WNT7AO00755 349 aa9.22□□□□□ -0.93
HDGFL3-205ENST00000568129 ENPP3O14638 875 aa9.22□□□□□ -0.93
HDGFL3-205ENST00000568129 CCNT1O60563 726 aaKnown RBP9.22□□□□□ -0.93
HDGFL3-205ENST00000568129 GPR32O75388 356 aa9.22□□□□□ -0.93
HDGFL3-205ENST00000568129 OATP04181 439 aa9.22□□□□□ -0.93
HDGFL3-205ENST00000568129 RABGGTBP53611 331 aa9.22□□□□□ -0.93
HDGFL3-205ENST00000568129 DEFB103AP81534 67 aa9.22□□□□□ -0.93
HDGFL3-205ENST00000568129 EPHA7Q15375 998 aa9.22□□□□□ -0.93
HDGFL3-205ENST00000568129 UGCGQ16739 394 aa9.22□□□□□ -0.93
HDGFL3-205ENST00000568129 XKR3Q5GH77 459 aa9.22□□□□□ -0.93
HDGFL3-205ENST00000568129 LIN28BQ6ZN17 250 aaKnown RBP eCLIP9.22□□□□□ -0.93
HDGFL3-205ENST00000568129 TSHZ1Q6ZSZ6 1077 aa9.22□□□□□ -0.93
HDGFL3-205ENST00000568129 MIER3Q7Z3K6 550 aa9.22□□□□□ -0.93
HDGFL3-205ENST00000568129 RTN4RL1Q86UN2 441 aaPredicted RBP9.22□□□□□ -0.93
HDGFL3-205ENST00000568129 C4orf19Q8IY42 314 aa9.22□□□□□ -0.93
HDGFL3-205ENST00000568129 SP7Q8TDD2 431 aaPredicted RBP9.22□□□□□ -0.93
HDGFL3-205ENST00000568129 TMX3Q96JJ7 454 aa9.22□□□□□ -0.93
HDGFL3-205ENST00000568129 C8orf76Q96K31 380 aa9.22□□□□□ -0.93
HDGFL3-205ENST00000568129 UIMC1Q96RL1 719 aa9.22□□□□□ -0.93
HDGFL3-205ENST00000568129 RAD9AQ99638 391 aa9.22□□□□□ -0.93
HDGFL3-205ENST00000568129 HSD17B14Q9BPX1 270 aa9.22□□□□□ -0.93
HDGFL3-205ENST00000568129 IFIH1Q9BYX4 1025 aaKnown RBP9.22□□□□□ -0.93
HDGFL3-205ENST00000568129 AGO3Q9H9G7 860 aaKnown RBP9.22□□□□□ -0.93
HDGFL3-205ENST00000568129 UPF2Q9HAU5 1272 aaKnown RBP9.22□□□□□ -0.93
HDGFL3-205ENST00000568129 TCEAL9Q9UHQ7 104 aa9.22□□□□□ -0.93
HDGFL3-205ENST00000568129 PPME1Q9Y570 386 aa9.22□□□□□ -0.93
HDGFL3-205ENST00000568129 TRPV2Q9Y5S1 764 aa9.22□□□□□ -0.93
HDGFL3-205ENST00000568129 ATG2AQ2TAZ0 1938 aa9.22□□□□□ -0.93
HDGFL3-205ENST00000568129 KIAA1671Q9BY89 1806 aa9.21□□□□□ -0.93
HDGFL3-205ENST00000568129 REV3LO60673 3130 aa9.21□□□□□ -0.93
HDGFL3-205ENST00000568129 KIF28PB7ZC32 967 aa9.21□□□□□ -0.94
HDGFL3-205ENST00000568129 LYPLA2O95372 231 aa9.21□□□□□ -0.94
HDGFL3-205ENST00000568129 P4HBP07237 508 aaKnown RBP9.21□□□□□ -0.94
HDGFL3-205ENST00000568129 CTSHP09668 335 aa9.21□□□□□ -0.94
HDGFL3-205ENST00000568129 MYOGP15173 224 aa9.21□□□□□ -0.94
HDGFL3-205ENST00000568129 QARSP47897 775 aaKnown RBP9.21□□□□□ -0.94
HDGFL3-205ENST00000568129 KCNJ6P48051 423 aa9.21□□□□□ -0.94
HDGFL3-205ENST00000568129 TRAPPC10P48553 1259 aa9.21□□□□□ -0.94
HDGFL3-205ENST00000568129 PSMC5P62195 406 aa9.21□□□□□ -0.94
HDGFL3-205ENST00000568129 IGBP1P78318 339 aa9.21□□□□□ -0.94
HDGFL3-205ENST00000568129 TAP1Q03518 808 aa9.21□□□□□ -0.94
HDGFL3-205ENST00000568129 TRIM29Q14134 588 aa9.21□□□□□ -0.94
HDGFL3-205ENST00000568129 ANO5Q75V66 913 aa9.21□□□□□ -0.94
HDGFL3-205ENST00000568129 POTEDQ86YR6 584 aa9.21□□□□□ -0.94
HDGFL3-205ENST00000568129 C4orf32Q8N8J7 132 aa9.21□□□□□ -0.94
HDGFL3-205ENST00000568129 FTHL17Q9BXU8 183 aa9.21□□□□□ -0.94
HDGFL3-205ENST00000568129 TSPYL2Q9H2G4 693 aaPredicted RBP9.21□□□□□ -0.94
HDGFL3-205ENST00000568129 NKX2-4Q9H2Z4 354 aa9.21□□□□□ -0.94
HDGFL3-205ENST00000568129 ADAMTS10Q9H324 1103 aa9.21□□□□□ -0.94
HDGFL3-205ENST00000568129 SLC28A3Q9HAS3 691 aa9.21□□□□□ -0.94
HDGFL3-205ENST00000568129 CDHR5Q9HBB8 845 aa9.21□□□□□ -0.94
HDGFL3-205ENST00000568129 RC3H2Q9HBD1 1191 aaKnown RBP9.21□□□□□ -0.94
HDGFL3-205ENST00000568129 ERVK-5Q9HDB9 667 aa9.21□□□□□ -0.94
HDGFL3-205ENST00000568129 SAMM50Q9Y512 469 aa9.21□□□□□ -0.94
HDGFL3-205ENST00000568129 INSL6Q9Y581 213 aa9.21□□□□□ -0.94
HDGFL3-205ENST00000568129 DKC1O60832 514 aaKnown RBP eCLIP9.2□□□□□ -0.94
HDGFL3-205ENST00000568129 MAFO75444 373 aaPredicted RBP9.2□□□□□ -0.94
HDGFL3-205ENST00000568129 SLITRK3O94933 977 aa9.2□□□□□ -0.94
HDGFL3-205ENST00000568129 ARHGEF15O94989 841 aa9.2□□□□□ -0.94
HDGFL3-205ENST00000568129 BAG4O95429 457 aaKnown RBP9.2□□□□□ -0.94
HDGFL3-205ENST00000568129 AMHP03971 560 aa9.2□□□□□ -0.94
HDGFL3-205ENST00000568129 GHRP10912 638 aa9.2□□□□□ -0.94
HDGFL3-205ENST00000568129 XRCC6P12956 609 aaKnown RBP eCLIP9.2□□□□□ -0.94
HDGFL3-205ENST00000568129 CRYBB1P53674 252 aaPredicted RBP9.2□□□□□ -0.94
HDGFL3-205ENST00000568129 ERVK-21P61565 698 aa9.2□□□□□ -0.94
HDGFL3-205ENST00000568129 CDC42EP1Q00587 391 aa9.2□□□□□ -0.94
HDGFL3-205ENST00000568129 PRKCEQ02156 737 aa9.2□□□□□ -0.94
HDGFL3-205ENST00000568129 CUL4AQ13619 759 aa9.2□□□□□ -0.94
HDGFL3-205ENST00000568129 SAFBQ15424 915 aaKnown RBP eCLIP9.2□□□□□ -0.94
HDGFL3-205ENST00000568129 EFCAB12Q6NXP0 572 aa9.2□□□□□ -0.94
HDGFL3-205ENST00000568129 NOSTRINQ8IVI9 506 aa9.2□□□□□ -0.94
HDGFL3-205ENST00000568129 CKAP2LQ8IYA6 745 aa9.2□□□□□ -0.94
HDGFL3-205ENST00000568129 ZNF689Q96CS4 500 aaPredicted RBP9.2□□□□□ -0.94
HDGFL3-205ENST00000568129 FAM49AQ9H0Q0 323 aaPredicted RBP9.2□□□□□ -0.94
HDGFL3-205ENST00000568129 TMEM60Q9H2L4 133 aa9.2□□□□□ -0.94
HDGFL3-205ENST00000568129 TMX1Q9H3N1 280 aa9.2□□□□□ -0.94
HDGFL3-205ENST00000568129 WRAP73Q9P2S5 460 aaPredicted RBP9.2□□□□□ -0.94
HDGFL3-205ENST00000568129 PADI3Q9ULW8 664 aa9.2□□□□□ -0.94
HDGFL3-205ENST00000568129 PCDHA12Q9UN75 941 aa9.2□□□□□ -0.94
HDGFL3-205ENST00000568129 RBAK-RBAKDNI3L0D1 243 aa9.19□□□□□ -0.94
HDGFL3-205ENST00000568129 M0QZ92 97 aa9.19□□□□□ -0.94
HDGFL3-205ENST00000568129 CHMP2AO43633 222 aa9.19□□□□□ -0.94
HDGFL3-205ENST00000568129 TLL1O43897 1013 aa9.19□□□□□ -0.94
HDGFL3-205ENST00000568129 NEMFO60524 1076 aa9.19□□□□□ -0.94
HDGFL3-205ENST00000568129 CA3P07451 260 aa9.19□□□□□ -0.94
HDGFL3-205ENST00000568129 LINC00271P0C7V0 271 aa9.19□□□□□ -0.94
HDGFL3-205ENST00000568129 TMOD1P28289 359 aa9.19□□□□□ -0.94
HDGFL3-205ENST00000568129 TOB1P50616 345 aaPredicted RBP9.19□□□□□ -0.94
HDGFL3-205ENST00000568129 FAM189BP81408 668 aa9.19□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 17 ms