RNA–Protein interactions for RNA: ENST00000568034.1

COMMD4-222, Transcript of COMM domain containing 4, humanhuman

TSL 5

Gene COMMD4, Length 1,085 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD4-222ENST00000568034 ARID2Q68CP9 1835 aa20.13■□□□□ 0.81
COMMD4-222ENST00000568034 KDM3AQ9Y4C1 1321 aa20.12■□□□□ 0.81
COMMD4-222ENST00000568034 RRN3P2A6NIE6 340 aa20.12■□□□□ 0.81
COMMD4-222ENST00000568034 DDX11L8A8MPP1 907 aa20.12■□□□□ 0.81
COMMD4-222ENST00000568034 SLC26A4O43511 780 aa20.12■□□□□ 0.81
COMMD4-222ENST00000568034 C22orf31O95567 290 aa20.12■□□□□ 0.81
COMMD4-222ENST00000568034 NPEPPSP55786 919 aa20.12■□□□□ 0.81
COMMD4-222ENST00000568034 IGBP1P78318 339 aa20.12■□□□□ 0.81
COMMD4-222ENST00000568034 PTGISQ16647 500 aa20.12■□□□□ 0.81
COMMD4-222ENST00000568034 PIGOQ8TEQ8 1089 aa20.12■□□□□ 0.81
COMMD4-222ENST00000568034 HTATIP2Q9BUP3 242 aa20.12■□□□□ 0.81
COMMD4-222ENST00000568034 PDLIM7Q9NR12 457 aa20.12■□□□□ 0.81
COMMD4-222ENST00000568034 TBX21Q9UL17 535 aa20.12■□□□□ 0.81
COMMD4-222ENST00000568034 KIAA1024Q9UPX6 916 aa20.12■□□□□ 0.81
COMMD4-222ENST00000568034 UBA7P41226 1012 aa20.11■□□□□ 0.81
COMMD4-222ENST00000568034 ME1P48163 572 aa20.11■□□□□ 0.81
COMMD4-222ENST00000568034 RARRES1P49788 294 aa20.11■□□□□ 0.81
COMMD4-222ENST00000568034 KARSQ15046 597 aaKnown RBP20.11■□□□□ 0.81
COMMD4-222ENST00000568034 MTERF2Q49AM1 385 aa20.11■□□□□ 0.81
COMMD4-222ENST00000568034 MTHFD1LQ6UB35 978 aa20.11■□□□□ 0.81
COMMD4-222ENST00000568034 RUFY4Q6ZNE9 571 aa20.11■□□□□ 0.81
COMMD4-222ENST00000568034 SERINC5Q86VE9 423 aa20.11■□□□□ 0.81
COMMD4-222ENST00000568034 LINC01465Q8N7H1 131 aa20.11■□□□□ 0.81
COMMD4-222ENST00000568034 CYP26B1Q9NR63 512 aa20.11■□□□□ 0.81
COMMD4-222ENST00000568034 ANKEF1Q9NU02 776 aa20.11■□□□□ 0.81
COMMD4-222ENST00000568034 DDX19AQ9NUU7 478 aaKnown RBP20.11■□□□□ 0.81
COMMD4-222ENST00000568034 TUBE1Q9UJT0 475 aa20.11■□□□□ 0.81
COMMD4-222ENST00000568034 A0A087X0B3 334 aa20.1■□□□□ 0.81
COMMD4-222ENST00000568034 GNAT1P11488 350 aa20.1■□□□□ 0.81
COMMD4-222ENST00000568034 CYP2C9P11712 490 aa20.1■□□□□ 0.81
COMMD4-222ENST00000568034 XRCC6P12956 609 aaKnown RBP eCLIP20.1■□□□□ 0.81
COMMD4-222ENST00000568034 TRIM71Q2Q1W2 868 aaKnown RBP20.1■□□□□ 0.81
COMMD4-222ENST00000568034 SH3RF1Q7Z6J0 888 aa20.1■□□□□ 0.81
COMMD4-222ENST00000568034 NACC1Q96RE7 527 aa20.1■□□□□ 0.81
COMMD4-222ENST00000568034 PLIN2Q99541 437 aa20.1■□□□□ 0.81
COMMD4-222ENST00000568034 DBR1Q9UK59 544 aaKnown RBP20.1■□□□□ 0.81
COMMD4-222ENST00000568034 TNRC18O15417 2968 aaPredicted RBP20.09■□□□□ 0.81
COMMD4-222ENST00000568034 IGKV6-21A0A0C4DH24 114 aa20.09■□□□□ 0.81
COMMD4-222ENST00000568034 DCDC2CA8MYV0 355 aa20.09■□□□□ 0.81
COMMD4-222ENST00000568034 E9PMD0 336 aa20.09■□□□□ 0.81
COMMD4-222ENST00000568034 TLR3O15455 904 aaKnown RBP20.09■□□□□ 0.81
COMMD4-222ENST00000568034 CLTBP09497 229 aa20.09■□□□□ 0.81
COMMD4-222ENST00000568034 PLCG1P19174 1290 aa20.09■□□□□ 0.81
COMMD4-222ENST00000568034 KLRC1P26715 233 aa20.09■□□□□ 0.81
COMMD4-222ENST00000568034 PTK7Q13308 1070 aa20.09■□□□□ 0.81
COMMD4-222ENST00000568034 ZRSR1Q15695 479 aaKnown RBP20.09■□□□□ 0.81
COMMD4-222ENST00000568034 RESP18Q5W5W9 173 aa20.09■□□□□ 0.81
COMMD4-222ENST00000568034 C7orf61Q8IZ16 206 aa20.09■□□□□ 0.81
COMMD4-222ENST00000568034 CEP170P1Q96L14 293 aa20.09■□□□□ 0.81
COMMD4-222ENST00000568034 BLOC1S4Q9NUP1 217 aa20.09■□□□□ 0.81
COMMD4-222ENST00000568034 PCDH10Q9P2E7 1040 aa20.09■□□□□ 0.81
COMMD4-222ENST00000568034 PCDHA2Q9Y5H9 948 aa20.09■□□□□ 0.81
COMMD4-222ENST00000568034 TRIM43BA6NCK2 446 aa20.08■□□□□ 0.81
COMMD4-222ENST00000568034 RBL2Q08999 1139 aa20.08■□□□□ 0.81
COMMD4-222ENST00000568034 XKR9Q5GH70 373 aa20.08■□□□□ 0.81
COMMD4-222ENST00000568034 ADALQ6DHV7 355 aa20.08■□□□□ 0.81
COMMD4-222ENST00000568034 CLEC17AQ6ZS10 378 aa20.08■□□□□ 0.81
COMMD4-222ENST00000568034 OTUD6AQ7L8S5 288 aa20.08■□□□□ 0.81
COMMD4-222ENST00000568034 TRIM43Q96BQ3 446 aaPredicted RBP20.08■□□□□ 0.81
COMMD4-222ENST00000568034 NT5C3AQ9H0P0 336 aa20.08■□□□□ 0.81
COMMD4-222ENST00000568034 DHX33Q9H6R0 707 aaKnown RBP20.08■□□□□ 0.81
COMMD4-222ENST00000568034 PPME1Q9Y570 386 aa20.08■□□□□ 0.81
COMMD4-222ENST00000568034 KIAA0355O15063 1070 aa20.07■□□□□ 0.8
COMMD4-222ENST00000568034 EYA4O95677 639 aa20.07■□□□□ 0.8
COMMD4-222ENST00000568034 MKRN4PQ13434 485 aaPredicted RBP20.07■□□□□ 0.8
COMMD4-222ENST00000568034 NAALADL2Q58DX5 795 aa20.07■□□□□ 0.8
COMMD4-222ENST00000568034 TRAF7Q6Q0C0 670 aa20.07■□□□□ 0.8
COMMD4-222ENST00000568034 KCTD17Q8N5Z5 321 aa20.07■□□□□ 0.8
COMMD4-222ENST00000568034 CALML4Q96GE6 196 aa20.07■□□□□ 0.8
COMMD4-222ENST00000568034 NOC4LQ9BVI4 516 aaKnown RBP20.07■□□□□ 0.8
COMMD4-222ENST00000568034 BHMT2Q9H2M3 363 aa20.07■□□□□ 0.8
COMMD4-222ENST00000568034 XPNPEP1Q9NQW7 623 aa20.07■□□□□ 0.8
COMMD4-222ENST00000568034 NOD1Q9Y239 953 aa20.07■□□□□ 0.8
COMMD4-222ENST00000568034 UMODL1Q5DID0 1318 aa20.06■□□□□ 0.8
COMMD4-222ENST00000568034 LOXHD1Q8IVV2 1947 aa20.06■□□□□ 0.8
COMMD4-222ENST00000568034 FAM237AA0A1B0GTK4 181 aa20.06■□□□□ 0.8
COMMD4-222ENST00000568034 SMIM35A0A1B0GVV1 85 aa20.06■□□□□ 0.8
COMMD4-222ENST00000568034 MAGEB2O15479 319 aa20.06■□□□□ 0.8
COMMD4-222ENST00000568034 EVI5O60447 810 aa20.06■□□□□ 0.8
COMMD4-222ENST00000568034 MAFO75444 373 aaPredicted RBP20.06■□□□□ 0.8
COMMD4-222ENST00000568034 ITGB8P26012 769 aa20.06■□□□□ 0.8
COMMD4-222ENST00000568034 CLCN3P51790 818 aa20.06■□□□□ 0.8
COMMD4-222ENST00000568034 TBC1D8BQ0IIM8 1120 aa20.06■□□□□ 0.8
COMMD4-222ENST00000568034 DRP2Q13474 957 aa20.06■□□□□ 0.8
COMMD4-222ENST00000568034 TAF2Q6P1X5 1199 aa20.06■□□□□ 0.8
COMMD4-222ENST00000568034 RPAINQ86UA6 219 aa20.06■□□□□ 0.8
COMMD4-222ENST00000568034 LRRC71Q8N4P6 559 aa20.06■□□□□ 0.8
COMMD4-222ENST00000568034 TMEM87AQ8NBN3 555 aa20.06■□□□□ 0.8
COMMD4-222ENST00000568034 EVPLQ92817 2033 aa20.06■□□□□ 0.8
COMMD4-222ENST00000568034 CDK5RAP3Q96JB5 506 aa20.06■□□□□ 0.8
COMMD4-222ENST00000568034 TMEM39AQ9NV64 488 aa20.06■□□□□ 0.8
COMMD4-222ENST00000568034 DNM3Q9UQ16 869 aa20.06■□□□□ 0.8
COMMD4-222ENST00000568034 LTBP2Q14767 1821 aa20.05■□□□□ 0.8
COMMD4-222ENST00000568034 A0A1W2PQ27 194 aa20.05■□□□□ 0.8
COMMD4-222ENST00000568034 A0A1W2PQ64 194 aa20.05■□□□□ 0.8
COMMD4-222ENST00000568034 A0A1W2PQD8 194 aa20.05■□□□□ 0.8
COMMD4-222ENST00000568034 CMA1P23946 247 aa20.05■□□□□ 0.8
COMMD4-222ENST00000568034 TXLNAP40222 546 aa20.05■□□□□ 0.8
COMMD4-222ENST00000568034 RFC5P40937 340 aa20.05■□□□□ 0.8
COMMD4-222ENST00000568034 SLC12A3P55017 1021 aa20.05■□□□□ 0.8
Retrieved 100 of 20,778 RNA–protein pairs in 19.2 ms