RNA–Protein interactions for RNA: ENST00000567289.5

SIN3A-208, Transcript of SIN3 transcription regulator family member A, humanhuman

TSL 2 BASIC

Gene SIN3A, Length 4,078 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SIN3A-208ENST00000567289 RFX7Q2KHR2 1363 aa12.66□□□□□ -0.38
SIN3A-208ENST00000567289 I3L4J1 428 aa12.66□□□□□ -0.38
SIN3A-208ENST00000567289 SERPINB6P35237 376 aa12.66□□□□□ -0.38
SIN3A-208ENST00000567289 PPP2R5CQ13362 524 aa12.66□□□□□ -0.38
SIN3A-208ENST00000567289 LIN9Q5TKA1 542 aa12.66□□□□□ -0.38
SIN3A-208ENST00000567289 PHLDB3Q6NSJ2 640 aa12.66□□□□□ -0.38
SIN3A-208ENST00000567289 GSDMBQ8TAX9 411 aa12.66□□□□□ -0.38
SIN3A-208ENST00000567289 G3BP2Q9UN86 482 aaKnown RBP12.66□□□□□ -0.38
SIN3A-208ENST00000567289 PSMC2P35998 433 aaKnown RBP12.65□□□□□ -0.38
SIN3A-208ENST00000567289 ALX1Q15699 326 aa12.65□□□□□ -0.38
SIN3A-208ENST00000567289 SMAD1Q15797 465 aaKnown RBP12.65□□□□□ -0.38
SIN3A-208ENST00000567289 RBM26Q5T8P6 1007 aaKnown RBP12.65□□□□□ -0.38
SIN3A-208ENST00000567289 PAPD7Q5XG87 772 aaKnown RBP12.65□□□□□ -0.38
SIN3A-208ENST00000567289 GJB7Q6PEY0 223 aa12.65□□□□□ -0.38
SIN3A-208ENST00000567289 TMEM139Q8IV31 216 aa12.65□□□□□ -0.38
SIN3A-208ENST00000567289 MMGT1Q8N4V1 131 aa12.65□□□□□ -0.38
SIN3A-208ENST00000567289 GIMAP8Q8ND71 665 aaPredicted RBP12.65□□□□□ -0.38
SIN3A-208ENST00000567289 TGS1Q96RS0 853 aaKnown RBP12.65□□□□□ -0.38
SIN3A-208ENST00000567289 PLAGL2Q9UPG8 496 aa12.65□□□□□ -0.38
SIN3A-208ENST00000567289 DYNC1LI1Q9Y6G9 523 aaKnown RBP12.65□□□□□ -0.38
SIN3A-208ENST00000567289 SALL1Q9NSC2 1324 aa12.65□□□□□ -0.38
SIN3A-208ENST00000567289 SSTR3P32745 418 aaPredicted RBP12.65□□□□□ -0.38
SIN3A-208ENST00000567289 ADCY2Q08462 1091 aa12.65□□□□□ -0.38
SIN3A-208ENST00000567289 SLC18A3Q16572 532 aa12.65□□□□□ -0.38
SIN3A-208ENST00000567289 FAM102BQ5T8I3 360 aa12.65□□□□□ -0.38
SIN3A-208ENST00000567289 XPO6Q96QU8 1125 aaKnown RBP12.65□□□□□ -0.38
SIN3A-208ENST00000567289 ISCA1Q9BUE6 129 aa12.65□□□□□ -0.38
SIN3A-208ENST00000567289 NOD2Q9HC29 1040 aa12.65□□□□□ -0.38
SIN3A-208ENST00000567289 ZBTB12Q9Y330 459 aaPredicted RBP12.65□□□□□ -0.38
SIN3A-208ENST00000567289 RHOBTB3O94955 611 aa12.65□□□□□ -0.38
SIN3A-208ENST00000567289 VEGFAP15692 232 aaPredicted RBP12.65□□□□□ -0.38
SIN3A-208ENST00000567289 SLC29A2Q14542 456 aa12.65□□□□□ -0.38
SIN3A-208ENST00000567289 DOK7Q18PE1 504 aa12.65□□□□□ -0.38
SIN3A-208ENST00000567289 FAM182BQ5T319 152 aa12.65□□□□□ -0.38
SIN3A-208ENST00000567289 ANKRD35Q8N283 1001 aa12.65□□□□□ -0.38
SIN3A-208ENST00000567289 GUF1Q8N442 669 aaKnown RBP12.65□□□□□ -0.38
SIN3A-208ENST00000567289 RAPGEF5Q92565 580 aa12.65□□□□□ -0.38
SIN3A-208ENST00000567289 ABTB1Q969K4 478 aaPredicted RBP12.65□□□□□ -0.38
SIN3A-208ENST00000567289 VCX3BQ9H321 246 aa12.65□□□□□ -0.38
SIN3A-208ENST00000567289 FAM217BQ9NTX9 383 aaPredicted RBP12.65□□□□□ -0.38
SIN3A-208ENST00000567289 GGA1Q9UJY5 639 aa12.65□□□□□ -0.38
SIN3A-208ENST00000567289 PCDHA6Q9UN73 950 aa12.65□□□□□ -0.38
SIN3A-208ENST00000567289 PCDHA8Q9Y5H6 950 aa12.65□□□□□ -0.38
SIN3A-208ENST00000567289 USP31Q70CQ4 1352 aa12.64□□□□□ -0.39
SIN3A-208ENST00000567289 PFDN1O60925 122 aa12.64□□□□□ -0.39
SIN3A-208ENST00000567289 YWHAGP61981 247 aaKnown RBP eCLIP12.64□□□□□ -0.39
SIN3A-208ENST00000567289 CDC37Q16543 378 aaPredicted RBP12.64□□□□□ -0.39
SIN3A-208ENST00000567289 CCDC137Q6PK04 289 aaKnown RBP12.64□□□□□ -0.39
SIN3A-208ENST00000567289 KIAA0825Q8IV33 1275 aa12.64□□□□□ -0.39
SIN3A-208ENST00000567289 ARHGAP24Q8N264 748 aa12.64□□□□□ -0.39
SIN3A-208ENST00000567289 C9orf72Q96LT7 481 aa12.64□□□□□ -0.39
SIN3A-208ENST00000567289 SCOCQ9UIL1 159 aa12.64□□□□□ -0.39
SIN3A-208ENST00000567289 SGK1O00141 431 aa12.64□□□□□ -0.39
SIN3A-208ENST00000567289 MAN1A1P33908 653 aa12.64□□□□□ -0.39
SIN3A-208ENST00000567289 ARL1P40616 181 aaPredicted RBP12.64□□□□□ -0.39
SIN3A-208ENST00000567289 GCLMP48507 274 aa12.64□□□□□ -0.39
SIN3A-208ENST00000567289 SMTNP53814 917 aa12.64□□□□□ -0.39
SIN3A-208ENST00000567289 PTK2Q05397 1052 aa12.64□□□□□ -0.39
SIN3A-208ENST00000567289 DRAP1Q14919 205 aaPredicted RBP12.64□□□□□ -0.39
SIN3A-208ENST00000567289 ANKS1AQ92625 1134 aa12.64□□□□□ -0.39
SIN3A-208ENST00000567289 CELF1Q92879 486 aaKnown RBP12.64□□□□□ -0.39
SIN3A-208ENST00000567289 ZBTB10Q96DT7 871 aa12.64□□□□□ -0.39
SIN3A-208ENST00000567289 NUDCD1Q96RS6 583 aa12.64□□□□□ -0.39
SIN3A-208ENST00000567289 PDS5AQ29RF7 1337 aaKnown RBP12.64□□□□□ -0.39
SIN3A-208ENST00000567289 CDK8P49336 464 aa12.64□□□□□ -0.39
SIN3A-208ENST00000567289 BFSP1Q12934 665 aa12.64□□□□□ -0.39
SIN3A-208ENST00000567289 KIF22Q14807 665 aa12.64□□□□□ -0.39
SIN3A-208ENST00000567289 SLMAPQ14BN4 828 aa12.64□□□□□ -0.39
SIN3A-208ENST00000567289 TRADDQ15628 312 aa12.64□□□□□ -0.39
SIN3A-208ENST00000567289 LRRC34Q8IZ02 419 aa12.64□□□□□ -0.39
SIN3A-208ENST00000567289 GOLGA8RI6L899 631 aa12.63□□□□□ -0.39
SIN3A-208ENST00000567289 GALCP54803 685 aa12.63□□□□□ -0.39
SIN3A-208ENST00000567289 KCNB1Q14721 858 aa12.63□□□□□ -0.39
SIN3A-208ENST00000567289 USP38Q8NB14 1042 aa12.63□□□□□ -0.39
SIN3A-208ENST00000567289 RSAD2Q8WXG1 361 aa12.63□□□□□ -0.39
SIN3A-208ENST00000567289 MAML1Q92585 1016 aa12.63□□□□□ -0.39
SIN3A-208ENST00000567289 TTC1Q99614 292 aa12.63□□□□□ -0.39
SIN3A-208ENST00000567289 ADGRL3Q9HAR2 1447 aa12.63□□□□□ -0.39
SIN3A-208ENST00000567289 OVOS2A0A0J9YW53 1432 aa12.63□□□□□ -0.39
SIN3A-208ENST00000567289 OVOS2Q6IE36 1432 aa12.63□□□□□ -0.39
SIN3A-208ENST00000567289 LOC102724428A0A0B4J2F2 783 aa12.63□□□□□ -0.39
SIN3A-208ENST00000567289 IGF2BP3O00425 579 aaKnown RBP eCLIP12.63□□□□□ -0.39
SIN3A-208ENST00000567289 FTLP02792 175 aaPredicted RBP12.63□□□□□ -0.39
SIN3A-208ENST00000567289 SARSP49591 514 aaKnown RBP12.63□□□□□ -0.39
SIN3A-208ENST00000567289 CACNB3P54284 484 aa12.63□□□□□ -0.39
SIN3A-208ENST00000567289 SIK1P57059 783 aa12.63□□□□□ -0.39
SIN3A-208ENST00000567289 BBS9Q3SYG4 887 aa12.63□□□□□ -0.39
SIN3A-208ENST00000567289 CEP128Q6ZU80 1094 aa12.63□□□□□ -0.39
SIN3A-208ENST00000567289 DGKHQ86XP1 1220 aa12.63□□□□□ -0.39
SIN3A-208ENST00000567289 CEP95Q96GE4 821 aa12.63□□□□□ -0.39
SIN3A-208ENST00000567289 LRRC37BQ96QE4 947 aa12.63□□□□□ -0.39
SIN3A-208ENST00000567289 DNAJC7Q99615 494 aa12.63□□□□□ -0.39
SIN3A-208ENST00000567289 LARSQ9P2J5 1176 aaKnown RBP12.63□□□□□ -0.39
SIN3A-208ENST00000567289 PREX1Q8TCU6 1659 aa12.63□□□□□ -0.39
SIN3A-208ENST00000567289 CFAP69A5D8W1 941 aa12.63□□□□□ -0.39
SIN3A-208ENST00000567289 ITGA4P13612 1032 aa12.63□□□□□ -0.39
SIN3A-208ENST00000567289 SCTRP47872 440 aa12.63□□□□□ -0.39
SIN3A-208ENST00000567289 SLC20A2Q08357 652 aa12.63□□□□□ -0.39
SIN3A-208ENST00000567289 TROAPQ12815 778 aa12.63□□□□□ -0.39
SIN3A-208ENST00000567289 LRRC36Q1X8D7 754 aa12.63□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 51.6 ms